RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 DDX4Q9NQI0 724 aaKnown RBP6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 CCDC177Q9NQR7 707 aaPredicted RBP6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 ANO10Q9NW15 660 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 MBD2Q9UBB5 411 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 DDX25Q9UHL0 483 aaKnown RBP6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 SATB2Q9UPW6 733 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 DNM3Q9UQ16 869 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 TTC41PQ6P2S7 1318 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 LAMA2P24043 3122 aaKnown RBP6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 CTAGE15A4D2H0 777 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 ACOD1A6NK06 481 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 LSM1O15116 133 aaKnown RBP6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 ASAP2O43150 1006 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 ZEB2O60315 1214 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 FMO6PO60774 539 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 SOAT2O75908 522 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 GJB6O95452 261 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 LARGE1O95461 756 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 NPTXRO95502 500 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 CAVIN2O95810 425 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 ECDO95905 644 aaPredicted RBP6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 LTFP02788 710 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 POLBP06746 335 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 CTAGE8P0CG41 777 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 ALOX15P16050 662 aaPredicted RBP6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 GCFC2P16383 781 aaKnown RBP6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 PAMP19021 973 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 CTNNA2P26232 953 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 PPM1AP35813 382 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 LIFRP42702 1097 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 TUBA4AP68366 448 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 HTD2P86397 168 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 AIMP1Q12904 312 aaKnown RBP6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 AUHQ13825 339 aaKnown RBP6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 DOC2AQ14183 400 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 PUM1Q14671 1186 aaKnown RBP eCLIP6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 STK38Q15208 465 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 SNCBQ16143 134 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 RNASEH2BQ5TBB1 312 aaKnown RBP6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 CCDC102BQ68D86 513 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 MEX3BQ6ZN04 569 aaKnown RBP6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 CTAGE6Q86UF2 777 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 CAND1Q86VP6 1230 aaKnown RBP6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 CD302Q8IX05 232 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 CTAGE4Q8IX94 777 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 C7orf57Q8NEG2 295 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 ASB12Q8WXK4 309 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 DTNBP1Q96EV8 351 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 CABS1Q96KC9 395 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 PPP1R16BQ96T49 567 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 COQ7Q99807 217 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 C1orf21Q9H246 121 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 CLK4Q9HAZ1 481 aaKnown RBP6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 HAUS2Q9NVX0 235 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 SUCLA2Q9P2R7 463 aaPredicted RBP6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 CDC23Q9UJX2 597 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 VPS28Q9UK41 221 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 BAG5Q9UL15 447 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 KIAA1257Q9ULG3 409 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 MRC1P22897 1456 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 DLEC1Q9Y238 1755 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 LOC100653049A0A140TA62 436 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 CYSRT1A8MQ03 144 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 APOL1O14791 398 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 KRT34O76011 436 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 ENO2P09104 434 aaPredicted RBP6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 CNTFP26441 200 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 CPA2P48052 419 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 ARHGDIBP52566 201 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 RAB15P59190 212 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 SNAPC2Q13487 334 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 BYSLQ13895 437 aaKnown RBP6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 DHCR24Q15392 516 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 TLR1Q15399 786 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 IYDQ6PHW0 289 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 ZNF783Q6ZMS7 281 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 SYDE1Q6ZW31 735 aaPredicted RBP6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 NLRP9Q7RTR0 991 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 MAMDC2Q7Z304 686 aaPredicted RBP6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 PPM1KQ8N3J5 372 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 LINC00116Q8NCU8 138 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 AGBL5Q8NDL9 886 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 GMCL1P1Q8NEA9 526 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 GIMAP7Q8NHV1 300 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 LPIN2Q92539 896 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 ATP6V0A1Q93050 837 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 SNF8Q96H20 258 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 SLC4A9Q96Q91 983 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 TBCBQ99426 244 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 HGH1Q9BTY7 390 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 OR10A4Q9H209 315 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 DENND2DQ9H6A0 471 aaPredicted RBP6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 A1CFQ9NQ94 594 aaKnown RBP6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 RXFP3Q9NSD7 469 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 ZSWIM5Q9P217 1185 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 ORC3Q9UBD5 711 aaPredicted RBP6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 SLC13A4Q9UKG4 626 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 MAP4K5Q9Y4K4 846 aa6.46□□□□□ -1.37
SMARCE1-208ENST00000474246 DOT1LQ8TEK3 1739 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms