RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 MTIF3Q9H2K0 278 aaKnown RBP8.16□□□□□ -1.1
CCDC93-207ENST00000474006 NRDE2Q9H7Z3 1164 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 GOLGA2P5Q9HBQ8 144 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 ETNK1Q9HBU6 452 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 ITGA11Q9UKX5 1188 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 R3HCC1Q9Y3T6 440 aaKnown RBP8.16□□□□□ -1.1
CCDC93-207ENST00000474006 A0A1W2PQC6 194 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 CASTOR2A6NHX0 329 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 PPEF2O14830 753 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 B4GALT3O60512 393 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 LRPAP1P30533 357 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 POLR2BP30876 1174 aaKnown RBP8.15□□□□□ -1.1
CCDC93-207ENST00000474006 ATICP31939 592 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 PBX1P40424 430 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 PIK3CAP42336 1068 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 CLCNKBP51801 687 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 EPHA4P54764 986 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 APBA1Q02410 837 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 DSC1Q08554 894 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 LRMPQ12912 555 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 NNTQ13423 1086 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 TUSC3Q13454 348 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 BTG3Q14201 252 aaPredicted RBP8.15□□□□□ -1.1
CCDC93-207ENST00000474006 UPP1Q16831 310 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 WDR44Q5JSH3 913 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 KLHDC7AQ5VTJ3 777 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 DPY19L2P1Q6NXN4 242 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 DCLRE1AQ6PJP8 1040 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 RSPH1Q8WYR4 309 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 COL26A1Q96A83 441 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 MRFAP1L1Q96HT8 127 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 HPDLQ96IR7 371 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 RNPC3Q96LT9 517 aaKnown RBP8.15□□□□□ -1.1
CCDC93-207ENST00000474006 YME1L1Q96TA2 773 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 RAD9AQ99638 391 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 PAAF1Q9BRP4 392 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 PI4K2AQ9BTU6 479 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 MRPL9Q9BYD2 267 aaKnown RBP8.15□□□□□ -1.1
CCDC93-207ENST00000474006 INTS2Q9H0H0 1204 aaKnown RBP8.15□□□□□ -1.1
CCDC93-207ENST00000474006 XYLT2Q9H1B5 865 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 GCNT4Q9P109 453 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 CACNG4Q9UBN1 327 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 DNAJB4Q9UDY4 337 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 EGFL7Q9UHF1 273 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 SIK3Q9Y2K2 1263 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 INSL6Q9Y581 213 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.15□□□□□ -1.1
CCDC93-207ENST00000474006 WASF2Q9Y6W5 498 aa8.15□□□□□ -1.1
CCDC93-207ENST00000474006 SOWAHDA6NJG2 315 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 GRXCR1A8MXD5 290 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 PODXLO00592 558 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 NRP1O14786 923 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 B3GAT3O94766 335 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 NOL4O94818 638 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 ASS1P00966 412 aaKnown RBP8.14□□□□□ -1.11
CCDC93-207ENST00000474006 GALTP07902 379 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 BMP8BP34820 402 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 OR1G1P47890 313 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 SERPINB4P48594 390 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 ALDH7A1P49419 539 aaKnown RBP8.14□□□□□ -1.11
CCDC93-207ENST00000474006 RABGGTBP53611 331 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 BCAR1P56945 870 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 LILRA4P59901 499 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 HTRA4P83105 476 aaPredicted RBP8.14□□□□□ -1.11
CCDC93-207ENST00000474006 MYO1EQ12965 1108 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 WDR72Q3MJ13 1102 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 SPOPLQ6IQ16 392 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 TRIM65Q6PJ69 517 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 CD300LGQ6UXG3 332 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 RRAGAQ7L523 313 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 VSTM4Q8IW00 320 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 DRC7Q8IY82 874 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 CMTR2Q8IYT2 770 aaKnown RBP8.14□□□□□ -1.11
CCDC93-207ENST00000474006 CCDC150Q8NCX0 1101 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 TAF4BQ92750 862 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 UROC1Q96N76 676 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 SLC9A7Q96T83 725 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 COLEC11Q9BWP8 271 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 LSM14BQ9BX40 385 aaKnown RBP8.14□□□□□ -1.11
CCDC93-207ENST00000474006 PRKD2Q9BZL6 878 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 CWH43Q9H720 699 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 RC3H2Q9HBD1 1191 aaKnown RBP8.14□□□□□ -1.11
CCDC93-207ENST00000474006 APOBEC3GQ9HC16 384 aaKnown RBP8.14□□□□□ -1.11
CCDC93-207ENST00000474006 SIX2Q9NPC8 291 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 UBE2TQ9NPD8 197 aaPredicted RBP8.14□□□□□ -1.11
CCDC93-207ENST00000474006 PLCB1Q9NQ66 1216 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 FAM207AQ9NSI2 230 aaPredicted RBP8.14□□□□□ -1.11
CCDC93-207ENST00000474006 NXF1Q9UBU9 619 aaKnown RBP8.14□□□□□ -1.11
CCDC93-207ENST00000474006 FAN1Q9Y2M0 1017 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 NUB1Q9Y5A7 615 aa8.14□□□□□ -1.11
CCDC93-207ENST00000474006 KPNA7A9QM74 516 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 NT5C1B-RDH14C9J2C7 533 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 F8W810 466 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 CYB561D2O14569 222 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 EPHB6O15197 1021 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 ZC3H11AO75152 810 aaKnown RBP eCLIP8.13□□□□□ -1.11
CCDC93-207ENST00000474006 TADA2AO75478 443 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 STAU1O95793 577 aaKnown RBP8.13□□□□□ -1.11
CCDC93-207ENST00000474006 ADH1AP07327 375 aa8.13□□□□□ -1.11
CCDC93-207ENST00000474006 PNPLA4P41247 253 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms