RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 TMEM130Q8N3G9 435 aa11.58□□□□□ -0.56
C9orf3-214ENST00000473778 ZCCHC9Q8N567 271 aaKnown RBP11.58□□□□□ -0.56
C9orf3-214ENST00000473778 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-214ENST00000473778 MAIP1Q8WWC4 291 aa11.58□□□□□ -0.56
C9orf3-214ENST00000473778 TRIM11Q96F44 468 aa11.58□□□□□ -0.56
C9orf3-214ENST00000473778 SLC24A3Q9HC58 644 aa11.58□□□□□ -0.56
C9orf3-214ENST00000473778 SLCO1B3Q9NPD5 702 aa11.58□□□□□ -0.56
C9orf3-214ENST00000473778 SAE1Q9UBE0 346 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-214ENST00000473778 NFASCO94856 1347 aa11.58□□□□□ -0.56
C9orf3-214ENST00000473778 LRRIQ4A6NIV6 560 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 SUN1O94901 812 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 HARSP12081 509 aaKnown RBP11.57□□□□□ -0.56
C9orf3-214ENST00000473778 NQO1P15559 274 aaKnown RBP11.57□□□□□ -0.56
C9orf3-214ENST00000473778 ATF7P17544 494 aaPredicted RBP11.57□□□□□ -0.56
C9orf3-214ENST00000473778 MMP8P22894 467 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 HMGB2P26583 209 aaKnown RBP11.57□□□□□ -0.56
C9orf3-214ENST00000473778 ZNF132P52740 706 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 ENPEPQ07075 957 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 ZNF394Q53GI3 561 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 NAIF1Q69YI7 327 aaPredicted RBP11.57□□□□□ -0.56
C9orf3-214ENST00000473778 ASRGL1Q7L266 308 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 GSTA5Q7RTV2 222 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 SAMD7Q7Z3H4 446 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 NIM1KQ8IY84 436 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 UBR7Q8N806 425 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 FEZF2Q8TBJ5 459 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 AGAP11Q8TF27 550 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 STAMBPL1Q96FJ0 436 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 IFT74Q96LB3 600 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 MAGEB18Q96M61 343 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 MCEEQ96PE7 176 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 SAYSD1Q9NPB0 183 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 CYP39A1Q9NYL5 469 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 DOCK1Q14185 1865 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 A0A0B4J269 797 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 TMEM191CA6NGB0 347 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 ASMTLO95671 621 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 TMEM191BP0C7N4 346 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 ATP5DP30049 168 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 POLGP54098 1239 aaPredicted RBP11.57□□□□□ -0.56
C9orf3-214ENST00000473778 BPIFB4P59827 614 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 COPS2P61201 443 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 MTM1Q13496 603 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 MTFR1Q15390 333 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 PKN2Q16513 984 aaKnown RBP11.57□□□□□ -0.56
C9orf3-214ENST00000473778 TRABD2AQ86V40 505 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 WDTC1Q8N5D0 677 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 NSUN6Q8TEA1 469 aaKnown RBP11.57□□□□□ -0.56
C9orf3-214ENST00000473778 TMEM121Q9BTD3 319 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 PORCNQ9H237 461 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 DHX33Q9H6R0 707 aaKnown RBP11.57□□□□□ -0.56
C9orf3-214ENST00000473778 KIAA1586Q9HCI6 787 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 TJP2Q9UDY2 1190 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 ARL2BPQ9Y2Y0 163 aa11.57□□□□□ -0.56
C9orf3-214ENST00000473778 CTDP1Q9Y5B0 961 aaPredicted RBP11.57□□□□□ -0.56
C9orf3-214ENST00000473778 GSTTP1A0A1W2PQM5 241 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 DNALI1O14645 258 aaPredicted RBP11.56□□□□□ -0.56
C9orf3-214ENST00000473778 FAM189A1O60320 539 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 SUPT20HL2P0C7V6 817 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 ARSEP51690 589 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 HMGCS2P54868 508 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 BACE1P56817 501 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 DNAJC3Q13217 504 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 NCOA4Q13772 614 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 OASLQ15646 514 aaKnown RBP11.56□□□□□ -0.56
C9orf3-214ENST00000473778 SUPT20HL1Q3ZLR7 823 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 LIN9Q5TKA1 542 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 C4orf33Q8N1A6 199 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 ALLCQ8N6M5 410 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 DENND1AQ8TEH3 1009 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 MRRFQ96E11 262 aaKnown RBP11.56□□□□□ -0.56
C9orf3-214ENST00000473778 VCPIP1Q96JH7 1222 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 WDR83Q9BRX9 315 aaKnown RBP11.56□□□□□ -0.56
C9orf3-214ENST00000473778 MSTO1Q9BUK6 570 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 RXFP1Q9HBX9 757 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 MRPL47Q9HD33 250 aaKnown RBP11.56□□□□□ -0.56
C9orf3-214ENST00000473778 EXOC1LA0A1B0GW35 172 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 A0A1W2PPM1 405 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 SPATA31C2B4DYI2 1134 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 POC1B-GALNT4F8VUJ3 575 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 K7ERI5 159 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 MAFGO15525 162 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 ALADP13716 330 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 ARL2P36404 184 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 GDF10P55107 478 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 GPS1Q13098 491 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 STAT4Q14765 748 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 CRYMQ14894 314 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 EFTUD2Q15029 972 aaKnown RBP eCLIP11.56□□□□□ -0.56
C9orf3-214ENST00000473778 XKR3Q5GH77 459 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 CYP4A22Q5TCH4 519 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 TLDC1Q6P9B6 456 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 FAM43BQ6ZT52 329 aaPredicted RBP11.56□□□□□ -0.56
C9orf3-214ENST00000473778 TFAP2BQ92481 460 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 UTP4Q969X6 686 aaKnown RBP11.56□□□□□ -0.56
C9orf3-214ENST00000473778 CGRRF1Q99675 332 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 PAIP2Q9BPZ3 127 aaKnown RBP11.56□□□□□ -0.56
C9orf3-214ENST00000473778 ARHGEF3Q9NR81 526 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 PARVAQ9NVD7 372 aa11.56□□□□□ -0.56
C9orf3-214ENST00000473778 ZNF148Q9UQR1 794 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms