RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 SPATA1Q5VX52 437 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 TTI2Q6NXR4 508 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 SARM1Q6SZW1 724 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 C15orf39Q6ZRI6 1047 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 MAEAQ7L5Y9 396 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 OTUD6AQ7L8S5 288 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 PPFIBP1Q86W92 1011 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 NELFCDQ8IXH7 590 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 DAW1Q8N136 415 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 GUF1Q8N442 669 aaKnown RBP6.94□□□□□ -1.3
HDAC1-205ENST00000472928 MYCT1Q8N699 235 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 RNF169Q8NCN4 708 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 CMASQ8NFW8 434 aaPredicted RBP6.94□□□□□ -1.3
HDAC1-205ENST00000472928 PJA1Q8NG27 643 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 DHTKD1Q96HY7 919 aaPredicted RBP6.94□□□□□ -1.3
HDAC1-205ENST00000472928 DRC1Q96MC2 740 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 KLHL5Q96PQ7 755 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 TSG101Q99816 390 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 C2orf49Q9BVC5 232 aaPredicted RBP6.94□□□□□ -1.3
HDAC1-205ENST00000472928 TIPINQ9BVW5 301 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 MRPL9Q9BYD2 267 aaKnown RBP6.94□□□□□ -1.3
HDAC1-205ENST00000472928 TRIM5Q9C035 493 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 POLR3FQ9H1D9 316 aaPredicted RBP6.94□□□□□ -1.3
HDAC1-205ENST00000472928 HSD3B7Q9H2F3 369 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 ZFAND3Q9H8U3 227 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 MRPL44Q9H9J2 332 aaKnown RBP6.94□□□□□ -1.3
HDAC1-205ENST00000472928 POLD4Q9HCU8 107 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 WDR6Q9NNW5 1121 aaKnown RBP6.94□□□□□ -1.3
HDAC1-205ENST00000472928 PARD6AQ9NPB6 346 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 GPRC5CQ9NQ84 441 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 FANCLQ9NW38 375 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 SIT1Q9Y3P8 196 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 CLUHO75153 1309 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 DSPP15924 2871 aaKnown RBP6.94□□□□□ -1.3
HDAC1-205ENST00000472928 ZMYM2Q9UBW7 1377 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 COL4A3Q01955 1670 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 SPEGQ15772 3267 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 PRR5-ARHGAP8B1AHC4 643 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 ANHXE9PGG2 379 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 CDK2AP1O14519 115 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 EIF3DO15371 548 aaKnown RBP eCLIP6.93□□□□□ -1.3
HDAC1-205ENST00000472928 ZC3H11AO75152 810 aaKnown RBP eCLIP6.93□□□□□ -1.3
HDAC1-205ENST00000472928 DGAT1O75907 488 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 KIF20AO95235 890 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 PAPLNO95428 1278 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 CNPP09543 421 aaKnown RBP6.93□□□□□ -1.3
HDAC1-205ENST00000472928 DARSP14868 501 aaKnown RBP6.93□□□□□ -1.3
HDAC1-205ENST00000472928 TIMP2P16035 220 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 ZNF18P17022 549 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 SDHBP21912 280 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 FGFR4P22455 802 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 NMT1P30419 496 aaKnown RBP6.93□□□□□ -1.3
HDAC1-205ENST00000472928 GBP2P32456 591 aaPredicted RBP6.93□□□□□ -1.3
HDAC1-205ENST00000472928 PTGIRP43119 386 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 SLC11A1P49279 550 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 WDR4P57081 412 aaKnown RBP6.93□□□□□ -1.3
HDAC1-205ENST00000472928 ARHGAP8P85298 464 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 FANCCQ00597 558 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 LMNB2Q03252 620 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 DMP1Q13316 513 aaPredicted RBP6.93□□□□□ -1.3
HDAC1-205ENST00000472928 HTR4Q13639 388 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 BMS1Q14692 1282 aaKnown RBP6.93□□□□□ -1.3
HDAC1-205ENST00000472928 ZNF528Q3MIS6 628 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 CDKAL1Q5VV42 579 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 DCLRE1AQ6PJP8 1040 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 ZNF295-AS1Q8N0V1 137 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 ZBTB44Q8NCP5 570 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 MCPH1Q8NEM0 835 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 SCFD1Q8WVM8 642 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 NELL1Q92832 810 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 KIFAP3Q92845 792 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 ZNF707Q96C28 371 aaPredicted RBP6.93□□□□□ -1.3
HDAC1-205ENST00000472928 ZNF668Q96K58 619 aaPredicted RBP6.93□□□□□ -1.3
HDAC1-205ENST00000472928 RTKNQ9BST9 563 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 RHOBTB2Q9BYZ6 727 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 SAP130Q9H0E3 1048 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 NRDE2Q9H7Z3 1164 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 XPNPEP1Q9NQW7 623 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 SLC2A4RGQ9NR83 387 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 OLFML3Q9NRN5 406 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 SAMSN1Q9NSI8 373 aaKnown RBP6.93□□□□□ -1.3
HDAC1-205ENST00000472928 TBC1D13Q9NVG8 400 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 IFNKQ9P0W0 207 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 NCDNQ9UBB6 729 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 SMG5Q9UPR3 1016 aaKnown RBP6.93□□□□□ -1.3
HDAC1-205ENST00000472928 ASPMQ8IZT6 3477 aa6.93□□□□□ -1.3
HDAC1-205ENST00000472928 TTC24A2A3L6 582 aaPredicted RBP6.92□□□□□ -1.3
HDAC1-205ENST00000472928 MEIS3P2A8K0S8 358 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 KCNJ18B7U540 433 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 SLC16A4O15374 487 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 CBFA2T2O43439 604 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 LILRB5O75023 590 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 RFPL2O75678 378 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 PRPF6O94906 941 aaKnown RBP6.92□□□□□ -1.3
HDAC1-205ENST00000472928 SERPINC1P01008 464 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 PTMAP06454 111 aaKnown RBP6.92□□□□□ -1.3
HDAC1-205ENST00000472928 LAMP2P13473 410 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 PLS3P13797 630 aa6.92□□□□□ -1.3
HDAC1-205ENST00000472928 ZSCAN20P17040 1043 aaPredicted RBP6.92□□□□□ -1.3
HDAC1-205ENST00000472928 CDK11BP21127 795 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms