RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 EEF2KMTQ96G04 330 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 RMDN2Q96LZ7 410 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 TGS1Q96RS0 853 aaKnown RBP10.7□□□□□ -0.7
APTX-216ENST00000472896 HAPLN3Q96S86 360 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 CCDC113Q9H0I3 377 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 GANQ9H2C0 597 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 SLC38A10Q9HBR0 1119 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 NMRK1Q9NWW6 199 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 NYAP2Q9P242 653 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 LNPEPQ9UIQ6 1025 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 NAGPAQ9UK23 515 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 M0R2N6 131 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 CETN3O15182 167 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 NKRFO15226 690 aaKnown RBP eCLIP10.7□□□□□ -0.7
APTX-216ENST00000472896 MAGEB2O15479 319 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 LPXNO60711 386 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 ATP9AO75110 1047 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 TCEA3O75764 348 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 CABYRO75952 493 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 FGGP02679 453 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 FGRP09769 529 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 OR52Z1P0C646 297 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 RASA1P20936 1047 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 MARK3P27448 753 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 PTPN4P29074 926 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 MGAT5Q09328 741 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 SF3A3Q12874 501 aaKnown RBP eCLIP10.7□□□□□ -0.7
APTX-216ENST00000472896 LSAMPQ13449 338 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 FOXB2Q5VYV0 432 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 ARMC3Q5W041 872 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 TAPT1Q6NXT6 567 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 VSTM1Q6UX27 236 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 MAEAQ7L5Y9 396 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 TLK2Q86UE8 772 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 EPS8L3Q8TE67 593 aaKnown RBP10.7□□□□□ -0.7
APTX-216ENST00000472896 CENPKQ9BS16 269 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 TRIM31Q9BZY9 425 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 MYLK2Q9H1R3 596 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 PRDM16Q9HAZ2 1276 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 SAR1AQ9NR31 198 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 HOMER2Q9NSB8 354 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 TRMT13Q9NUP7 481 aaKnown RBP10.7□□□□□ -0.7
APTX-216ENST00000472896 DDX43Q9NXZ2 648 aaKnown RBP10.7□□□□□ -0.7
APTX-216ENST00000472896 NKIRAS1Q9NYS0 192 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 GRHL1Q9NZI5 618 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 LRRC37A2A6NM11 1700 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 SCN5AQ14524 2016 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 hCG_1642624A0A1W2PR95 340 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 SMIM23A6NLE4 172 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 EIF4E1BA6NMX2 242 aaKnown RBP10.69□□□□□ -0.7
APTX-216ENST00000472896 PHF2O75151 1096 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 UPP2O95045 317 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 TTLL1O95922 423 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 PTGIRP43119 386 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 SERPINB4P48594 390 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 NT5C2P49902 561 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 IL9RQ01113 521 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 RNASELQ05823 741 aaKnown RBP10.69□□□□□ -0.7
APTX-216ENST00000472896 AP1B1Q10567 949 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 GRB10Q13322 594 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 IRF2BP2Q7Z5L9 587 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 TRIM59Q8IWR1 403 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 CHST13Q8NET6 341 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 FBXO25Q8TCJ0 367 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 LRRC15Q8TF66 581 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 PPP1R13LQ8WUF5 828 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 LRRC37BQ96QE4 947 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 PLIN2Q99541 437 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 TBC1D10AQ9BXI6 508 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 AP5M1Q9H0R1 490 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 TMEM60Q9H2L4 133 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 SEMA4AQ9H3S1 761 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 ZNF212Q9UDV6 495 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 PCYOX1Q9UHG3 505 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 SNX24Q9Y343 169 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 NCANO14594 1321 aa10.69□□□□□ -0.7
APTX-216ENST00000472896 MUC6Q6W4X9 2439 aa10.68□□□□□ -0.7
APTX-216ENST00000472896 TRANK1O15050 2925 aa10.68□□□□□ -0.7
APTX-216ENST00000472896 IGKV6D-41A0A0C4DH26 115 aa10.68□□□□□ -0.7
APTX-216ENST00000472896 DDX3YO15523 660 aaKnown RBP10.68□□□□□ -0.7
APTX-216ENST00000472896 MAP3K7O43318 606 aa10.68□□□□□ -0.7
APTX-216ENST00000472896 ALAS1P13196 640 aa10.68□□□□□ -0.7
APTX-216ENST00000472896 GM2AP17900 193 aa10.68□□□□□ -0.7
APTX-216ENST00000472896 SLC34A1Q06495 639 aa10.68□□□□□ -0.7
APTX-216ENST00000472896 USP4Q13107 963 aa10.68□□□□□ -0.7
APTX-216ENST00000472896 CNPY1Q3B7I2 92 aa10.68□□□□□ -0.7
APTX-216ENST00000472896 ZNF568Q3ZCX4 644 aa10.68□□□□□ -0.7
APTX-216ENST00000472896 ZCWPW2Q504Y3 356 aa10.68□□□□□ -0.7
APTX-216ENST00000472896 SNX30Q5VWJ9 437 aa10.68□□□□□ -0.7
APTX-216ENST00000472896 DAB2IPQ5VWQ8 1189 aa10.68□□□□□ -0.7
APTX-216ENST00000472896 CGB2Q6NT52 195 aa10.68□□□□□ -0.7
APTX-216ENST00000472896 RGS9BPQ6ZS82 235 aa10.68□□□□□ -0.7
APTX-216ENST00000472896 EEPD1Q7L9B9 569 aa10.68□□□□□ -0.7
APTX-216ENST00000472896 ZNF571Q7Z3V5 609 aaPredicted RBP10.68□□□□□ -0.7
APTX-216ENST00000472896 MYOCDQ8IZQ8 938 aa10.68□□□□□ -0.7
APTX-216ENST00000472896 UCMAQ8WVF2 138 aa10.68□□□□□ -0.7
APTX-216ENST00000472896 CTNNBL1Q8WYA6 563 aaPredicted RBP10.68□□□□□ -0.7
APTX-216ENST00000472896 SLC7A6OSQ96CW6 309 aaPredicted RBP10.68□□□□□ -0.7
APTX-216ENST00000472896 SPATA16Q9BXB7 569 aa10.68□□□□□ -0.7
APTX-216ENST00000472896 PITPNM3Q9BZ71 974 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms