RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 BMT2Q1RMZ1 405 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 USP41Q3LFD5 358 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 SEZ6Q53EL9 994 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 C4orf48Q5BLP8 95 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 FAM171A1Q5VUB5 890 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 CCDC149Q6ZUS6 474 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 VASH1Q7L8A9 365 aaPredicted RBP9.92□□□□□ -0.82
SMC4-213ENST00000472282 ALYREFQ86V81 257 aaKnown RBP9.92□□□□□ -0.82
SMC4-213ENST00000472282 SMYD4Q8IYR2 804 aaPredicted RBP9.92□□□□□ -0.82
SMC4-213ENST00000472282 C3orf58Q8NDZ4 430 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 ST13P5Q8NFI4 369 aaPredicted RBP9.92□□□□□ -0.82
SMC4-213ENST00000472282 SPATA20Q8TB22 786 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 LNX1Q8TBB1 728 aaPredicted RBP9.92□□□□□ -0.82
SMC4-213ENST00000472282 ZNF507Q8TCN5 953 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 RSAD2Q8WXG1 361 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 GSDMAQ96QA5 445 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 PPP1R10Q96QC0 940 aaKnown RBP9.92□□□□□ -0.82
SMC4-213ENST00000472282 CLSTN3Q9BQT9 956 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 C1QTNF2Q9BXJ5 285 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 NUP62CLQ9H1M0 184 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 CLSTN2Q9H4D0 955 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 TMEM206Q9H813 350 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 RMND1Q9NWS8 449 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 STK39Q9UEW8 545 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 USTQ9Y2C2 406 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 SSX2IPQ9Y2D8 614 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 TRIOO75962 3097 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 SF3B1O75533 1304 aaKnown RBP eCLIP9.91□□□□□ -0.827e-33■■■■■ 320.9
SMC4-213ENST00000472282 A0A0B4J269 797 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 I3L4J1 428 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 OGTO15294 1046 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 MBD3O95983 291 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 VSIG8P0DPA2 414 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 AVPR2P30518 371 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 ADSSP30520 456 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 TNFSF9P41273 254 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 BRCC3P46736 316 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 CLCNKBP51801 687 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 TCF15Q12870 199 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 MTMR3Q13615 1198 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 ZBTB41Q5SVQ8 909 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 ISM2Q6H9L7 571 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 SLFN12LQ6IEE8 588 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 ARMCX5Q6P1M9 558 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 RSPO2Q6UXX9 243 aaPredicted RBP9.91□□□□□ -0.82
SMC4-213ENST00000472282 C15orf39Q6ZRI6 1047 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 CEP57Q86XR8 500 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 SUGP1Q8IWZ8 645 aaKnown RBP9.91□□□□□ -0.82
SMC4-213ENST00000472282 LINC00528Q8N1L1 170 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 MEIOBQ8N635 442 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 CMASQ8NFW8 434 aaPredicted RBP9.91□□□□□ -0.82
SMC4-213ENST00000472282 POMGNT1Q8WZA1 660 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 SMG7Q92540 1137 aaKnown RBP9.91□□□□□ -0.82
SMC4-213ENST00000472282 ZMAT2Q96NC0 199 aaKnown RBP9.91□□□□□ -0.82
SMC4-213ENST00000472282 MYADMQ96S97 322 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 MSTO1Q9BUK6 570 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 CCDC94Q9BW85 323 aaPredicted RBP9.91□□□□□ -0.82
SMC4-213ENST00000472282 FNIP2Q9P278 1114 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 MAN1B1Q9UKM7 699 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 AGO2Q9UKV8 859 aaKnown RBP9.91□□□□□ -0.82
SMC4-213ENST00000472282 MAPK8IP1Q9UQF2 711 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 STYXL1Q9Y6J8 313 aa9.91□□□□□ -0.82
SMC4-213ENST00000472282 MIA3Q5JRA6 1907 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 CLUHO75153 1309 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 SMIM28A0A1B0GU29 152 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 SOBPA7XYQ1 873 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 BIN1O00499 593 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 TGFB1I1O43294 461 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 NARSO43776 548 aaKnown RBP9.9□□□□□ -0.82
SMC4-213ENST00000472282 FAM189A1O60320 539 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 PAPLNO95428 1278 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 CXCL8P10145 99 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 GARTP22102 1010 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 FSHRP23945 695 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 YARSP54577 528 aaKnown RBP9.9□□□□□ -0.82
SMC4-213ENST00000472282 NTHL1P78549 312 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 PSMD5Q16401 504 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 KNOP1Q1ED39 458 aaKnown RBP9.9□□□□□ -0.82
SMC4-213ENST00000472282 XKR4Q5GH76 650 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 ZNF658Q5TYW1 1059 aaPredicted RBP9.9□□□□□ -0.82
SMC4-213ENST00000472282 ALKAL1Q6UXT8 129 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 HS2ST1Q7LGA3 356 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 TMEM105Q8N8V8 129 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 ZSWIM2Q8NEG5 633 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 NOC3LQ8WTT2 800 aaKnown RBP9.9□□□□□ -0.82
SMC4-213ENST00000472282 PIK3R5Q8WYR1 880 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 SAAL1Q96ER3 474 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 SNX27Q96L92 541 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 ACAP3Q96P50 834 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 CBWD1Q9BRT8 395 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 TTPALQ9BTX7 342 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 PCIF1Q9H4Z3 704 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 KCNK12Q9HB15 430 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 WDR6Q9NNW5 1121 aaKnown RBP9.9□□□□□ -0.82
SMC4-213ENST00000472282 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.9□□□□□ -0.82
SMC4-213ENST00000472282 AGPAT3Q9NRZ7 376 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 TOPORSQ9NS56 1045 aaPredicted RBP9.9□□□□□ -0.82
SMC4-213ENST00000472282 FBXW11Q9UKB1 542 aa9.9□□□□□ -0.82
SMC4-213ENST00000472282 GOLGA8IPA6NC78 632 aa9.89□□□□□ -0.83
SMC4-213ENST00000472282 GOLGA8JA6NMD2 632 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms