RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 TBC1D32Q96NH3 1257 aa11.24□□□□□ -0.61
CDHR3-209ENST00000472116 CAMK1GQ96NX5 476 aa11.24□□□□□ -0.61
CDHR3-209ENST00000472116 LXNQ9BS40 222 aa11.24□□□□□ -0.61
CDHR3-209ENST00000472116 SLC38A7Q9NVC3 462 aa11.24□□□□□ -0.61
CDHR3-209ENST00000472116 DNAAF2Q9NVR5 837 aaKnown RBP11.24□□□□□ -0.61
CDHR3-209ENST00000472116 PILRBQ9UKJ0 227 aa11.24□□□□□ -0.61
CDHR3-209ENST00000472116 NAP1L2Q9ULW6 460 aaPredicted RBP11.24□□□□□ -0.61
CDHR3-209ENST00000472116 RBM8AQ9Y5S9 174 aaKnown RBP11.24□□□□□ -0.61
CDHR3-209ENST00000472116 TEX51A0A1B0GUA7 166 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 RRP8O43159 456 aaKnown RBP11.23□□□□□ -0.61
CDHR3-209ENST00000472116 AP5Z1O43299 807 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 ITPKAP23677 461 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 U2AF2P26368 475 aaKnown RBP eCLIP11.23□□□□□ -0.612e-16■■□□□ 12.4
CDHR3-209ENST00000472116 CDC25CP30307 473 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 AVPR1AP37288 418 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 FUT2Q10981 343 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 PRPF4BQ13523 1007 aaKnown RBP11.23□□□□□ -0.61
CDHR3-209ENST00000472116 PDGFRLQ15198 375 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 TAF12Q16514 161 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 DCAF4L1Q3SXM0 396 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 TRIM68Q6AZZ1 485 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 RNF19BQ6ZMZ0 732 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 C3orf58Q8NDZ4 430 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 ASAP3Q8TDY4 903 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 CHFRQ96EP1 664 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 ARID3AQ99856 593 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 FAM83CQ9BQN1 747 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 LRRC3Q9BY71 257 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 GOLGA2P5Q9HBQ8 144 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 HPS4Q9NQG7 708 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 FSCN3Q9NQT6 498 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 KIAA1522Q9P206 1035 aaPredicted RBP11.23□□□□□ -0.61
CDHR3-209ENST00000472116 DAXXQ9UER7 740 aaPredicted RBP11.23□□□□□ -0.61
CDHR3-209ENST00000472116 PCDHB13Q9Y5F0 798 aa11.23□□□□□ -0.61
CDHR3-209ENST00000472116 CCDC196A0A1B0GTZ2 297 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 PODXLO00592 558 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 OBSL1O75147 1896 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 DGAT1O75907 488 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 TDP2O95551 362 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 MCM4P33991 863 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 P2RY2P41231 377 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 HELZP42694 1942 aaKnown RBP11.22□□□□□ -0.61
CDHR3-209ENST00000472116 YARSP54577 528 aaKnown RBP11.22□□□□□ -0.61
CDHR3-209ENST00000472116 PPP2R5CQ13362 524 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 VEPH1Q14D04 833 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 TAF1BQ53T94 588 aaPredicted RBP11.22□□□□□ -0.61
CDHR3-209ENST00000472116 PEAR1Q5VY43 1037 aaPredicted RBP11.22□□□□□ -0.61
CDHR3-209ENST00000472116 GAREM2Q75VX8 874 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 GPR155Q7Z3F1 870 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 CHD1LQ86WJ1 897 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 PGBD3Q8N328 593 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 PDCD7Q8N8D1 485 aaKnown RBP11.22□□□□□ -0.61
CDHR3-209ENST00000472116 TBCKQ8TEA7 893 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 RLN3Q8WXF3 142 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 PSMG2Q969U7 264 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 PGLYRP2Q96PD5 576 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 PPP1R10Q96QC0 940 aaKnown RBP11.22□□□□□ -0.61
CDHR3-209ENST00000472116 POLR3CQ9BUI4 534 aaPredicted RBP11.22□□□□□ -0.61
CDHR3-209ENST00000472116 OXCT2Q9BYC2 517 aaPredicted RBP11.22□□□□□ -0.61
CDHR3-209ENST00000472116 PIEZO2Q9H5I5 2752 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 PDZD7Q9H5P4 517 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 PRORYQ9H606 182 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 ZSWIM4Q9H7M6 989 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 KIF9Q9HAQ2 790 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 CAPN10Q9HC96 672 aa11.22□□□□□ -0.61
CDHR3-209ENST00000472116 FBRSL1Q9HCM7 1045 aaKnown RBP11.22□□□□□ -0.61
CDHR3-209ENST00000472116 TOPORSQ9NS56 1045 aaPredicted RBP11.22□□□□□ -0.61
CDHR3-209ENST00000472116 CFAP46Q8IYW2 2715 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 EML1O00423 815 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 ADAMTS3O15072 1205 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 LIG1P18858 919 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 GLRA2P23416 452 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 IGFBP6P24592 240 aaPredicted RBP11.21□□□□□ -0.61
CDHR3-209ENST00000472116 GJA4P35212 333 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 CYP4F8P98187 520 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 RPL6Q02878 288 aaKnown RBP11.21□□□□□ -0.61
CDHR3-209ENST00000472116 DUSP4Q13115 394 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 NR1H3Q13133 447 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 MRPL58Q14197 206 aaKnown RBP11.21□□□□□ -0.61
CDHR3-209ENST00000472116 CRY1Q16526 586 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 C2orf27AQ580R0 203 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 CD300LGQ6UXG3 332 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 SLC36A4Q6YBV0 504 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 DNAJB7Q7Z6W7 309 aaPredicted RBP11.21□□□□□ -0.61
CDHR3-209ENST00000472116 GLRX5Q86SX6 157 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 DAGLBQ8NCG7 672 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 OR2I1PQ8NGU4 316 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 OLIG1Q8TAK6 271 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 ETNPPLQ8TBG4 499 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 SETD7Q8WTS6 366 aaKnown RBP11.21□□□□□ -0.61
CDHR3-209ENST00000472116 PNMA5Q96PV4 448 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 FNBP1Q96RU3 617 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 SMG9Q9H0W8 520 aaKnown RBP11.21□□□□□ -0.61
CDHR3-209ENST00000472116 POLR3FQ9H1D9 316 aaPredicted RBP11.21□□□□□ -0.61
CDHR3-209ENST00000472116 C2orf40Q9H1Z8 148 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 CXCL16Q9H2A7 254 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 XPNPEP1Q9NQW7 623 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 DDX25Q9UHL0 483 aaKnown RBP11.21□□□□□ -0.61
CDHR3-209ENST00000472116 MMP17Q9ULZ9 603 aa11.21□□□□□ -0.61
CDHR3-209ENST00000472116 OTOL1A6NHN0 477 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms