RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 DNAJB7Q7Z6W7 309 aaPredicted RBP24.34■■□□□ 1.49
C9orf3-213ENST00000471978 ADSSL1Q8N142 457 aa24.34■■□□□ 1.49
C9orf3-213ENST00000471978 THEM5Q8N1Q8 247 aa24.34■■□□□ 1.49
C9orf3-213ENST00000471978 LINC00301Q8NCQ3 95 aa24.34■■□□□ 1.49
C9orf3-213ENST00000471978 KCNG4Q8TDN1 519 aa24.34■■□□□ 1.49
C9orf3-213ENST00000471978 DEPDC1BQ8WUY9 529 aa24.34■■□□□ 1.49
C9orf3-213ENST00000471978 PSMG2Q969U7 264 aa24.34■■□□□ 1.49
C9orf3-213ENST00000471978 FGFBP2Q9BYJ0 223 aa24.34■■□□□ 1.49
C9orf3-213ENST00000471978 SEMA4AQ9H3S1 761 aa24.34■■□□□ 1.49
C9orf3-213ENST00000471978 MRPS17Q9Y2R5 130 aaKnown RBP24.34■■□□□ 1.49
C9orf3-213ENST00000471978 KPNA7A9QM74 516 aa24.33■■□□□ 1.49
C9orf3-213ENST00000471978 NCAM2O15394 837 aa24.33■■□□□ 1.49
C9orf3-213ENST00000471978 LDHAP00338 332 aaKnown RBP24.33■■□□□ 1.49
C9orf3-213ENST00000471978 GARTP22102 1010 aa24.33■■□□□ 1.49
C9orf3-213ENST00000471978 TARSP26639 723 aaKnown RBP24.33■■□□□ 1.49
C9orf3-213ENST00000471978 MAGEA9P43362 315 aa24.33■■□□□ 1.49
C9orf3-213ENST00000471978 CDR1P51861 262 aa24.33■■□□□ 1.49
C9orf3-213ENST00000471978 WNT7BP56706 349 aa24.33■■□□□ 1.49
C9orf3-213ENST00000471978 TFAMQ00059 246 aaKnown RBP24.33■■□□□ 1.49
C9orf3-213ENST00000471978 SV2CQ496J9 727 aa24.33■■□□□ 1.49
C9orf3-213ENST00000471978 WSCD1Q658N2 575 aa24.33■■□□□ 1.49
C9orf3-213ENST00000471978 ZC3H14Q6PJT7 736 aaKnown RBP24.33■■□□□ 1.49
C9orf3-213ENST00000471978 ITIH5Q86UX2 942 aa24.33■■□□□ 1.49
C9orf3-213ENST00000471978 BRSK2Q8IWQ3 736 aa24.33■■□□□ 1.49
C9orf3-213ENST00000471978 MAML2Q8IZL2 1156 aaPredicted RBP24.33■■□□□ 1.49
C9orf3-213ENST00000471978 BORCS6Q96GS4 357 aa24.33■■□□□ 1.49
C9orf3-213ENST00000471978 ZNF560Q96MR9 790 aa24.33■■□□□ 1.49
C9orf3-213ENST00000471978 SEPT5Q99719 369 aaPredicted RBP24.33■■□□□ 1.49
C9orf3-213ENST00000471978 ZNF334Q9HCZ1 680 aaPredicted RBP24.33■■□□□ 1.49
C9orf3-213ENST00000471978 SPTBN4Q9H254 2564 aa24.33■■□□□ 1.48
C9orf3-213ENST00000471978 CACNA1IQ9P0X4 2223 aa24.33■■□□□ 1.48
C9orf3-213ENST00000471978 GVINP1Q7Z2Y8 2422 aa24.32■■□□□ 1.48
C9orf3-213ENST00000471978 SPTLC2O15270 562 aa24.32■■□□□ 1.48
C9orf3-213ENST00000471978 LAMTOR5O43504 91 aa24.32■■□□□ 1.48
C9orf3-213ENST00000471978 TUFMP49411 452 aaKnown RBP24.32■■□□□ 1.48
C9orf3-213ENST00000471978 MGAT5BQ3V5L5 792 aa24.32■■□□□ 1.48
C9orf3-213ENST00000471978 MFSD6LQ8IWD5 586 aa24.32■■□□□ 1.48
C9orf3-213ENST00000471978 CCDC65Q8IXS2 484 aa24.32■■□□□ 1.48
C9orf3-213ENST00000471978 FAM200AQ8TCP9 573 aa24.32■■□□□ 1.48
C9orf3-213ENST00000471978 E2F7Q96AV8 911 aa24.32■■□□□ 1.48
C9orf3-213ENST00000471978 CLDN23Q96B33 292 aa24.32■■□□□ 1.48
C9orf3-213ENST00000471978 ZNF396Q96N95 335 aaPredicted RBP24.32■■□□□ 1.48
C9orf3-213ENST00000471978 CBWD1Q9BRT8 395 aa24.32■■□□□ 1.48
C9orf3-213ENST00000471978 RBAKQ9NYW8 714 aaPredicted RBP24.32■■□□□ 1.48
C9orf3-213ENST00000471978 TFIP11Q9UBB9 837 aaKnown RBP24.32■■□□□ 1.48
C9orf3-213ENST00000471978 GOLGA8IPA6NC78 632 aa24.31■■□□□ 1.48
C9orf3-213ENST00000471978 SHISA7A6NL88 538 aa24.31■■□□□ 1.48
C9orf3-213ENST00000471978 GOLGA8JA6NMD2 632 aa24.31■■□□□ 1.48
C9orf3-213ENST00000471978 HEPACAM2A8MVW5 462 aa24.31■■□□□ 1.48
C9orf3-213ENST00000471978 MAN2B1O00754 1011 aa24.31■■□□□ 1.48
C9orf3-213ENST00000471978 ZNF263O14978 683 aa24.31■■□□□ 1.48
C9orf3-213ENST00000471978 PRPF6O94906 941 aaKnown RBP24.31■■□□□ 1.48
C9orf3-213ENST00000471978 FGF19O95750 216 aa24.31■■□□□ 1.48
C9orf3-213ENST00000471978 LMNAP02545 664 aaKnown RBP24.31■■□□□ 1.48
C9orf3-213ENST00000471978 PNPLA4P41247 253 aa24.31■■□□□ 1.48
C9orf3-213ENST00000471978 STXBP5Q5T5C0 1151 aa24.31■■□□□ 1.48
C9orf3-213ENST00000471978 GAREM2Q75VX8 874 aa24.31■■□□□ 1.48
C9orf3-213ENST00000471978 NOC3LQ8WTT2 800 aaKnown RBP24.31■■□□□ 1.48
C9orf3-213ENST00000471978 CACTINQ8WUQ7 758 aaKnown RBP24.31■■□□□ 1.48
C9orf3-213ENST00000471978 LPIN3Q9BQK8 851 aa24.31■■□□□ 1.48
C9orf3-213ENST00000471978 ATXN3LQ9H3M9 355 aa24.31■■□□□ 1.48
C9orf3-213ENST00000471978 PCIF1Q9H4Z3 704 aa24.31■■□□□ 1.48
C9orf3-213ENST00000471978 TMEM206Q9H813 350 aa24.31■■□□□ 1.48
C9orf3-213ENST00000471978 TRPV5Q9NQA5 729 aa24.31■■□□□ 1.48
C9orf3-213ENST00000471978 NCANO14594 1321 aa24.31■■□□□ 1.48
C9orf3-213ENST00000471978 EXTL3O43909 919 aa24.3■■□□□ 1.48
C9orf3-213ENST00000471978 PPP6R2O75170 966 aa24.3■■□□□ 1.48
C9orf3-213ENST00000471978 ITGB3P05106 788 aa24.3■■□□□ 1.48
C9orf3-213ENST00000471978 GABRR2P28476 465 aa24.3■■□□□ 1.48
C9orf3-213ENST00000471978 POLR2BP30876 1174 aaKnown RBP24.3■■□□□ 1.48
C9orf3-213ENST00000471978 RPS9P46781 194 aaKnown RBP24.3■■□□□ 1.48
C9orf3-213ENST00000471978 SMARCB1Q12824 385 aa24.3■■□□□ 1.48
C9orf3-213ENST00000471978 VEPH1Q14D04 833 aa24.3■■□□□ 1.48
C9orf3-213ENST00000471978 LRRTM3Q86VH5 581 aa24.3■■□□□ 1.48
C9orf3-213ENST00000471978 C2orf15Q8WU43 125 aaKnown RBP24.3■■□□□ 1.48
C9orf3-213ENST00000471978 RSPRY1Q96DX4 576 aa24.3■■□□□ 1.48
C9orf3-213ENST00000471978 LRRC27Q9C0I9 530 aa24.3■■□□□ 1.48
C9orf3-213ENST00000471978 TNMDQ9H2S6 317 aa24.3■■□□□ 1.48
C9orf3-213ENST00000471978 NDRG2Q9UN36 371 aaKnown RBP24.3■■□□□ 1.48
C9orf3-213ENST00000471978 AGAP1Q9UPQ3 857 aa24.3■■□□□ 1.48
C9orf3-213ENST00000471978 ATF6P18850 670 aa24.29■■□□□ 1.48
C9orf3-213ENST00000471978 FZD5Q13467 585 aa24.29■■□□□ 1.48
C9orf3-213ENST00000471978 GPIHBP1Q8IV16 184 aa24.29■■□□□ 1.48
C9orf3-213ENST00000471978 ARID3BQ8IVW6 561 aaPredicted RBP24.29■■□□□ 1.48
C9orf3-213ENST00000471978 YAF2Q8IY57 180 aa24.29■■□□□ 1.48
C9orf3-213ENST00000471978 DCP1BQ8IZD4 617 aaKnown RBP24.29■■□□□ 1.48
C9orf3-213ENST00000471978 C1orf127Q8N9H9 656 aa24.29■■□□□ 1.48
C9orf3-213ENST00000471978 SPPL2BQ8TCT7 592 aa24.29■■□□□ 1.48
C9orf3-213ENST00000471978 SNX21Q969T3 373 aa24.29■■□□□ 1.48
C9orf3-213ENST00000471978 FBXO4Q9UKT5 387 aa24.29■■□□□ 1.48
C9orf3-213ENST00000471978 PIAS3Q9Y6X2 628 aa24.29■■□□□ 1.48
C9orf3-213ENST00000471978 TCHHQ07283 1943 aa24.29■■□□□ 1.48
C9orf3-213ENST00000471978 EP300Q09472 2414 aaPredicted RBP24.28■■□□□ 1.48
C9orf3-213ENST00000471978 CSTF1Q05048 431 aaKnown RBP24.28■■□□□ 1.48
C9orf3-213ENST00000471978 E2F4Q16254 413 aa24.28■■□□□ 1.48
C9orf3-213ENST00000471978 TAF12Q16514 161 aa24.28■■□□□ 1.48
C9orf3-213ENST00000471978 ZNF528Q3MIS6 628 aa24.28■■□□□ 1.48
C9orf3-213ENST00000471978 ARHGAP15Q53QZ3 475 aa24.28■■□□□ 1.48
C9orf3-213ENST00000471978 GPR158Q5T848 1215 aa24.28■■□□□ 1.48
C9orf3-213ENST00000471978 FOXD4L5Q5VV16 416 aaPredicted RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms