RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 LRRC14BA6NHZ5 514 aa7.14□□□□□ -1.27
CCDC39-202ENST00000471307 ZNF785A8K8V0 405 aa7.14□□□□□ -1.27
CCDC39-202ENST00000471307 C1RP00736 705 aa7.14□□□□□ -1.27
CCDC39-202ENST00000471307 FTLP02792 175 aaPredicted RBP7.14□□□□□ -1.27
CCDC39-202ENST00000471307 LPOP22079 712 aaPredicted RBP7.14□□□□□ -1.27
CCDC39-202ENST00000471307 NPTX2P47972 431 aa7.14□□□□□ -1.27
CCDC39-202ENST00000471307 MC2RQ01718 297 aa7.14□□□□□ -1.27
CCDC39-202ENST00000471307 HABP2Q14520 560 aaPredicted RBP7.14□□□□□ -1.27
CCDC39-202ENST00000471307 SLC30A5Q8TAD4 765 aa7.14□□□□□ -1.27
CCDC39-202ENST00000471307 NTN5Q8WTR8 489 aaPredicted RBP7.14□□□□□ -1.27
CCDC39-202ENST00000471307 FBXL20Q96IG2 436 aa7.14□□□□□ -1.27
CCDC39-202ENST00000471307 LRIG1Q96JA1 1093 aa7.14□□□□□ -1.27
CCDC39-202ENST00000471307 LRFN3Q9BTN0 628 aa7.14□□□□□ -1.27
CCDC39-202ENST00000471307 PDS5BQ9NTI5 1447 aa7.14□□□□□ -1.27
CCDC39-202ENST00000471307 ABCF2Q9UG63 623 aa7.14□□□□□ -1.27
CCDC39-202ENST00000471307 ANKRD6Q9Y2G4 727 aa7.14□□□□□ -1.27
CCDC39-202ENST00000471307 PRDM2Q13029 1718 aa7.13□□□□□ -1.27
CCDC39-202ENST00000471307 NESP48681 1621 aa7.13□□□□□ -1.27
CCDC39-202ENST00000471307 hCG_2014768A0A024R1R8 64 aa7.13□□□□□ -1.27
CCDC39-202ENST00000471307 TRIAP1O43715 76 aa7.13□□□□□ -1.27
CCDC39-202ENST00000471307 PROP1O75360 226 aa7.13□□□□□ -1.27
CCDC39-202ENST00000471307 MATN4O95460 622 aa7.13□□□□□ -1.27
CCDC39-202ENST00000471307 IL12RB1P42701 662 aa7.13□□□□□ -1.27
CCDC39-202ENST00000471307 ZNF135P52742 658 aaPredicted RBP7.13□□□□□ -1.27
CCDC39-202ENST00000471307 ANAPC15P60006 121 aa7.13□□□□□ -1.27
CCDC39-202ENST00000471307 NSUN7Q8NE18 718 aaKnown RBP7.13□□□□□ -1.27
CCDC39-202ENST00000471307 LPIN2Q92539 896 aa7.13□□□□□ -1.27
CCDC39-202ENST00000471307 VOPP1Q96AW1 172 aa7.13□□□□□ -1.27
CCDC39-202ENST00000471307 TIMP4Q99727 224 aa7.13□□□□□ -1.27
CCDC39-202ENST00000471307 MRPL46Q9H2W6 279 aaKnown RBP7.13□□□□□ -1.27
CCDC39-202ENST00000471307 LMBRD1Q9NUN5 540 aa7.13□□□□□ -1.27
CCDC39-202ENST00000471307 ETAA1Q9NY74 926 aa7.13□□□□□ -1.27
CCDC39-202ENST00000471307 A0A0B4J269 797 aa7.12□□□□□ -1.27
CCDC39-202ENST00000471307 E2F8A0AVK6 867 aa7.12□□□□□ -1.27
CCDC39-202ENST00000471307 PRSS29PA6NIE9 313 aa7.12□□□□□ -1.27
CCDC39-202ENST00000471307 MGST3O14880 152 aa7.12□□□□□ -1.27
CCDC39-202ENST00000471307 GNAI2P04899 355 aa7.12□□□□□ -1.27
CCDC39-202ENST00000471307 TYRP14679 529 aa7.12□□□□□ -1.27
CCDC39-202ENST00000471307 PPP3CBP16298 524 aa7.12□□□□□ -1.27
CCDC39-202ENST00000471307 GRIA3P42263 894 aa7.12□□□□□ -1.27
CCDC39-202ENST00000471307 MAPK10P53779 464 aa7.12□□□□□ -1.27
CCDC39-202ENST00000471307 PSMC1P62191 440 aaKnown RBP7.12□□□□□ -1.27
CCDC39-202ENST00000471307 NHLH1Q02575 133 aa7.12□□□□□ -1.27
CCDC39-202ENST00000471307 TUBB3Q13509 450 aa7.12□□□□□ -1.27
CCDC39-202ENST00000471307 FAM9AQ8IZU1 332 aaPredicted RBP7.12□□□□□ -1.27
CCDC39-202ENST00000471307 B3GALNT2Q8NCR0 500 aa7.12□□□□□ -1.27
CCDC39-202ENST00000471307 MYCBPAPQ8TBZ2 947 aa7.12□□□□□ -1.27
CCDC39-202ENST00000471307 MVB12AQ96EY5 273 aa7.12□□□□□ -1.27
CCDC39-202ENST00000471307 UROC1Q96N76 676 aa7.12□□□□□ -1.27
CCDC39-202ENST00000471307 C1orf43Q9BWL3 253 aa7.12□□□□□ -1.27
CCDC39-202ENST00000471307 ENTPD2Q9Y5L3 495 aa7.12□□□□□ -1.27
CCDC39-202ENST00000471307 WDR27A2RRH5 827 aa7.11□□□□□ -1.27
CCDC39-202ENST00000471307 MASP2O00187 686 aa7.11□□□□□ -1.27
CCDC39-202ENST00000471307 IGLV2-14P01704 120 aa7.11□□□□□ -1.27
CCDC39-202ENST00000471307 WT1P19544 449 aaPredicted RBP7.11□□□□□ -1.27
CCDC39-202ENST00000471307 PTH2RP49190 550 aa7.11□□□□□ -1.27
CCDC39-202ENST00000471307 MAP2K6P52564 334 aa7.11□□□□□ -1.27
CCDC39-202ENST00000471307 SOX10P56693 466 aa7.11□□□□□ -1.27
CCDC39-202ENST00000471307 C21orf58P58505 322 aa7.11□□□□□ -1.27
CCDC39-202ENST00000471307 MRPS21P82921 87 aaKnown RBP7.11□□□□□ -1.27
CCDC39-202ENST00000471307 EMC10Q5UCC4 262 aa7.11□□□□□ -1.27
CCDC39-202ENST00000471307 PPP1R32Q7Z5V6 425 aa7.11□□□□□ -1.27
CCDC39-202ENST00000471307 TOR1AIP2Q8NFQ8 470 aa7.11□□□□□ -1.27
CCDC39-202ENST00000471307 TNPO1Q92973 898 aaKnown RBP7.11□□□□□ -1.27
CCDC39-202ENST00000471307 SPATA5L1Q9BVQ7 753 aa7.11□□□□□ -1.27
CCDC39-202ENST00000471307 GTPBP4Q9BZE4 634 aaKnown RBP7.11□□□□□ -1.27
CCDC39-202ENST00000471307 TINAGL1Q9GZM7 467 aaPredicted RBP7.11□□□□□ -1.27
CCDC39-202ENST00000471307 RSAD1Q9HA92 442 aa7.11□□□□□ -1.27
CCDC39-202ENST00000471307 AASDHPPTQ9NRN7 309 aa7.11□□□□□ -1.27
CCDC39-202ENST00000471307 KLC4Q9NSK0 619 aa7.11□□□□□ -1.27
CCDC39-202ENST00000471307 PNPOQ9NVS9 261 aa7.11□□□□□ -1.27
CCDC39-202ENST00000471307 FANCD2Q9BXW9 1451 aa7.11□□□□□ -1.27
CCDC39-202ENST00000471307 ABLIM3O94929 683 aa7.1□□□□□ -1.27
CCDC39-202ENST00000471307 NDUFV1P49821 464 aa7.1□□□□□ -1.27
CCDC39-202ENST00000471307 CATIPQ7Z7H3 387 aa7.1□□□□□ -1.27
CCDC39-202ENST00000471307 PEG10Q86TG7 708 aaKnown RBP7.1□□□□□ -1.27
CCDC39-202ENST00000471307 PSD4Q8NDX1 1056 aa7.1□□□□□ -1.27
CCDC39-202ENST00000471307 BRIX1Q8TDN6 353 aaKnown RBP7.1□□□□□ -1.27
CCDC39-202ENST00000471307 HOOK2Q96ED9 719 aa7.1□□□□□ -1.27
CCDC39-202ENST00000471307 ALG8Q9BVK2 526 aa7.1□□□□□ -1.27
CCDC39-202ENST00000471307 SLAMF7Q9NQ25 335 aa7.1□□□□□ -1.27
CCDC39-202ENST00000471307 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.1□□□□□ -1.27
CCDC39-202ENST00000471307 F5H697 171 aa7.09□□□□□ -1.27
CCDC39-202ENST00000471307 ALDH1L1O75891 902 aa7.09□□□□□ -1.27
CCDC39-202ENST00000471307 ITGALP20701 1170 aa7.09□□□□□ -1.27
CCDC39-202ENST00000471307 TXNRD1Q16881 649 aa7.09□□□□□ -1.27
CCDC39-202ENST00000471307 ATAT1Q5SQI0 421 aa7.09□□□□□ -1.27
CCDC39-202ENST00000471307 TAF2Q6P1X5 1199 aa7.09□□□□□ -1.27
CCDC39-202ENST00000471307 TFAP2BQ92481 460 aa7.09□□□□□ -1.27
CCDC39-202ENST00000471307 HPS3Q969F9 1004 aa7.09□□□□□ -1.27
CCDC39-202ENST00000471307 CDK5RAP3Q96JB5 506 aa7.09□□□□□ -1.27
CCDC39-202ENST00000471307 PBKQ96KB5 322 aa7.09□□□□□ -1.27
CCDC39-202ENST00000471307 MAP3K14Q99558 947 aa7.09□□□□□ -1.27
CCDC39-202ENST00000471307 KRTAP17-1Q9BYP8 105 aa7.09□□□□□ -1.27
CCDC39-202ENST00000471307 KLK15Q9H2R5 256 aa7.09□□□□□ -1.27
CCDC39-202ENST00000471307 IP6K2Q9UHH9 426 aa7.09□□□□□ -1.27
CCDC39-202ENST00000471307 PNMA8BQ9ULN7 279 aaPredicted RBP7.09□□□□□ -1.27
CCDC39-202ENST00000471307 WRNQ14191 1432 aaPredicted RBP eCLIP7.09□□□□□ -1.28
CCDC39-202ENST00000471307 ADM5C9JUS6 153 aa7.08□□□□□ -1.28
CCDC39-202ENST00000471307 GCOM1H8Y6P7 765 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms