RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 POLRMTO00411 1230 aaKnown RBP6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 SLC16A6O15403 523 aa6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 MPPED1O15442 326 aa6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 IGLV2-14P01704 120 aa6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 RARBP10826 455 aa6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 HDCP19113 662 aa6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 SMARCA1P28370 1054 aa6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 CACNA2D1P54289 1103 aa6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 STRIP1Q5VSL9 837 aa6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 B3GNT9Q6UX72 402 aa6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 RD3Q7Z3Z2 195 aa6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 PEG10Q86TG7 708 aaKnown RBP6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 BOLLQ8N9W6 283 aaKnown RBP6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 PSD4Q8NDX1 1056 aa6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 TNPO1Q92973 898 aaKnown RBP6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 AMBRA1Q9C0C7 1298 aa6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 TINAGL1Q9GZM7 467 aaPredicted RBP6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 LMBRD1Q9NUN5 540 aa6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 TYW1Q9NV66 732 aaKnown RBP6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 THRAP3Q9Y2W1 955 aaKnown RBP6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 NEU2Q9Y3R4 380 aa6.44□□□□□ -1.38
PRPF40A-206ENST00000471167 TOR1BO14657 336 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 AKAP10O43572 662 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 PEX1O43933 1283 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 VPS4BO75351 444 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 DNAJB5O75953 348 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 RHOP08100 348 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 CHRM3P20309 590 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 ITPKBP27987 946 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 NPTX2P47972 431 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 RAB27AP51159 221 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 EXOSC9Q06265 439 aaKnown RBP6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 PIGFQ07326 219 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 PTPRRQ15256 657 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 TXNRD1Q16881 649 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 USP37Q86T82 979 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 COL23A1Q86Y22 540 aaPredicted RBP6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 FAM109AQ8N4B1 249 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 CAGE1Q8TC20 777 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 SNX19Q92543 992 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 NUP88Q99567 741 aaPredicted RBP6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 SMOQ99835 787 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 WDCPQ9H6R7 721 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 CFAP97Q9P2B7 532 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 LRIT1Q9P2V4 623 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 ANKRD6Q9Y2G4 727 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 NR2E3Q9Y5X4 410 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 SPATA31A3Q5VYP0 1347 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 ADGRA2Q96PE1 1338 aa6.43□□□□□ -1.38
PRPF40A-206ENST00000471167 RFKQ969G6 155 aa6.42□□□□□ -1.38
PRPF40A-206ENST00000471167 FBXL20Q96IG2 436 aa6.42□□□□□ -1.38
PRPF40A-206ENST00000471167 CGRRF1Q99675 332 aa6.42□□□□□ -1.38
PRPF40A-206ENST00000471167 DUSP26Q9BV47 211 aa6.42□□□□□ -1.38
PRPF40A-206ENST00000471167 SERHLQ9NQF3 203 aa6.42□□□□□ -1.38
PRPF40A-206ENST00000471167 PNPOQ9NVS9 261 aa6.42□□□□□ -1.38
PRPF40A-206ENST00000471167 ZDHHC8Q9ULC8 765 aa6.42□□□□□ -1.38
PRPF40A-206ENST00000471167 DMTF1Q9Y222 760 aa6.42□□□□□ -1.38
PRPF40A-206ENST00000471167 DCLK1O15075 740 aa6.41□□□□□ -1.38
PRPF40A-206ENST00000471167 ARIH2O95376 493 aa6.41□□□□□ -1.38
PRPF40A-206ENST00000471167 CHRM2P08172 466 aa6.41□□□□□ -1.38
PRPF40A-206ENST00000471167 PCSK6P29122 969 aa6.41□□□□□ -1.38
PRPF40A-206ENST00000471167 PROK1P58294 105 aa6.41□□□□□ -1.38
PRPF40A-206ENST00000471167 THEMIS2Q5TEJ8 643 aa6.41□□□□□ -1.38
PRPF40A-206ENST00000471167 VPS53Q5VIR6 699 aa6.41□□□□□ -1.38
PRPF40A-206ENST00000471167 KAZNQ674X7 775 aa6.41□□□□□ -1.38
PRPF40A-206ENST00000471167 TPH2Q8IWU9 490 aa6.41□□□□□ -1.38
PRPF40A-206ENST00000471167 TOR1AIP2Q8NFQ8 470 aa6.41□□□□□ -1.38
PRPF40A-206ENST00000471167 VOPP1Q96AW1 172 aa6.41□□□□□ -1.38
PRPF40A-206ENST00000471167 ANLNQ9NQW6 1124 aa6.41□□□□□ -1.38
PRPF40A-206ENST00000471167 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.41□□□□□ -1.38
PRPF40A-206ENST00000471167 ASB6Q9NWX5 421 aa6.41□□□□□ -1.38
PRPF40A-206ENST00000471167 PTGFRNQ9P2B2 879 aa6.41□□□□□ -1.38
PRPF40A-206ENST00000471167 DKK3Q9UBP4 350 aa6.41□□□□□ -1.38
PRPF40A-206ENST00000471167 ADAM21Q9UKJ8 722 aa6.41□□□□□ -1.38
PRPF40A-206ENST00000471167 SPATA31A6Q5VVP1 1343 aa6.41□□□□□ -1.38
PRPF40A-206ENST00000471167 hCG_2014768A0A024R1R8 64 aa6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 PPFIA2O75334 1257 aa6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 ZNF37AP17032 561 aaPredicted RBP6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 IBSPP21815 317 aaPredicted RBP6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 GRIA3P42263 894 aa6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 IL12RB1P42701 662 aa6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 NDUFV1P49821 464 aa6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 ZNF134P52741 427 aa6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 C21orf58P58505 322 aa6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 SP2Q02086 613 aa6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 PIN1Q13526 163 aaPredicted RBP6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 CCDC142Q17RM4 750 aa6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 EMC10Q5UCC4 262 aa6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 ARHGEF25Q86VW2 580 aa6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 GRAMD1CQ8IYS0 662 aa6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 DIS3LQ8TF46 1054 aaKnown RBP6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 SLC35A4Q96G79 324 aa6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 PGBD1Q96JS3 809 aa6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 GNL3LQ9NVN8 582 aaKnown RBP6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 ARPP21Q9UBL0 812 aaPredicted RBP6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 PCDHA6Q9UN73 950 aa6.4□□□□□ -1.38
PRPF40A-206ENST00000471167 A0A0B4J269 797 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 LINC00473A8K010 186 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 F5H697 171 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 CHEK2O96017 543 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms