RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 CNGA2Q16280 664 aa11.68□□□□□ -0.54
SND1-208ENST00000470463 SGO2Q562F6 1265 aa11.68□□□□□ -0.54
SND1-208ENST00000470463 FBXO47Q5MNV8 452 aa11.68□□□□□ -0.54
SND1-208ENST00000470463 NAA35Q5VZE5 725 aa11.68□□□□□ -0.54
SND1-208ENST00000470463 C9orf57Q5W0N0 161 aa11.68□□□□□ -0.54
SND1-208ENST00000470463 MRPL10Q7Z7H8 261 aaKnown RBP11.68□□□□□ -0.54
SND1-208ENST00000470463 MMGT1Q8N4V1 131 aa11.68□□□□□ -0.54
SND1-208ENST00000470463 SLC43A3Q8NBI5 491 aa11.68□□□□□ -0.54
SND1-208ENST00000470463 ARHGEF26Q96DR7 871 aa11.68□□□□□ -0.54
SND1-208ENST00000470463 CYFIP2Q96F07 1278 aa11.68□□□□□ -0.54
SND1-208ENST00000470463 CAPZA3Q96KX2 299 aa11.68□□□□□ -0.54
SND1-208ENST00000470463 MMS19Q96T76 1030 aa11.68□□□□□ -0.54
SND1-208ENST00000470463 OSGEPQ9NPF4 335 aa11.68□□□□□ -0.54
SND1-208ENST00000470463 FAM105AQ9NUU6 356 aa11.68□□□□□ -0.54
SND1-208ENST00000470463 GDAP2Q9NXN4 497 aa11.68□□□□□ -0.54
SND1-208ENST00000470463 COLQQ9Y215 455 aaPredicted RBP11.68□□□□□ -0.54
SND1-208ENST00000470463 ALG6Q9Y672 507 aa11.68□□□□□ -0.54
SND1-208ENST00000470463 MYH10P35580 1976 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 ARHGEF37A1IGU5 675 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 CCDC188H7C350 402 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 PGRMC1O00264 195 aaKnown RBP11.67□□□□□ -0.54
SND1-208ENST00000470463 PIRO00625 290 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 KCNK3O14649 394 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 MEFVO15553 781 aaPredicted RBP11.67□□□□□ -0.54
SND1-208ENST00000470463 SRGAP2O75044 1071 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 SETSIPP0DME0 302 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 MMP8P22894 467 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 CTNNA2P26232 953 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 MAN1A1P33908 653 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 RAD23BP54727 409 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 NFX1Q12986 1120 aaKnown RBP11.67□□□□□ -0.54
SND1-208ENST00000470463 MAP9Q49MG5 647 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 PLEKHA7Q6IQ23 1121 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 SCARA5Q6ZMJ2 495 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 ERICH1Q86X53 443 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 RASGEF1CQ8N431 466 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 SMG8Q8ND04 991 aaKnown RBP11.67□□□□□ -0.54
SND1-208ENST00000470463 SPATA4Q8NEY3 305 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.67□□□□□ -0.54
SND1-208ENST00000470463 SPATA18Q8TC71 538 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 RSPH1Q8WYR4 309 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 ERVK-5Q9HDB9 667 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 ACP6Q9NPH0 428 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 STARD7Q9NQZ5 370 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 RNF216Q9NWF9 866 aaPredicted RBP11.67□□□□□ -0.54
SND1-208ENST00000470463 PHF24Q9UPV7 400 aa11.67□□□□□ -0.54
SND1-208ENST00000470463 GRIN2DO15399 1336 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 GOLGA6L10A0A0M3HER8 536 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 A0A0U1RQF3 1178 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 CCDC151A5D8V7 595 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 KPNA7A9QM74 516 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 DNM1LO00429 736 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 ATP8B1O43520 1251 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 SPOPO43791 374 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 PARNO95453 639 aaKnown RBP11.66□□□□□ -0.54
SND1-208ENST00000470463 THP07101 528 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 CD19P15391 556 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 DESP17661 470 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 AKAP5P24588 427 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 RPL9P32969 192 aaKnown RBP11.66□□□□□ -0.54
SND1-208ENST00000470463 CETN2P41208 172 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 LHX8Q68G74 356 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 WDR93Q6P2C0 686 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 TOP6BLQ8N6T0 577 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 SLC4A11Q8NBS3 891 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 APPL2Q8NEU8 664 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 IPO4Q8TEX9 1081 aaKnown RBP11.66□□□□□ -0.54
SND1-208ENST00000470463 COG1Q8WTW3 980 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 MAIP1Q8WWC4 291 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 CPA5Q8WXQ8 436 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 DDX27Q96GQ7 796 aaKnown RBP11.66□□□□□ -0.54
SND1-208ENST00000470463 ZNF333Q96JL9 665 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 FAM84AQ96KN4 292 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 TNIP3Q96KP6 325 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 HEXIM2Q96MH2 286 aaKnown RBP11.66□□□□□ -0.54
SND1-208ENST00000470463 UROC1Q96N76 676 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 ZMAT2Q96NC0 199 aaKnown RBP11.66□□□□□ -0.54
SND1-208ENST00000470463 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.66□□□□□ -0.545e-7■□□□□ 10.6
SND1-208ENST00000470463 FTHL17Q9BXU8 183 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.66□□□□□ -0.541e-6■■■□□ 14.9
SND1-208ENST00000470463 IP6K2Q9UHH9 426 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 ANAPC7Q9UJX3 599 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 POLIQ9UNA4 740 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 COG5Q9UP83 839 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 HES2Q9Y543 173 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 SNX9Q9Y5X1 595 aa11.66□□□□□ -0.54
SND1-208ENST00000470463 TRIP12Q14669 1992 aaPredicted RBP11.66□□□□□ -0.54
SND1-208ENST00000470463 A0A1W2PQ45 241 aaPredicted RBP11.65□□□□□ -0.54
SND1-208ENST00000470463 A0A1W2PQY0 241 aa11.65□□□□□ -0.54
SND1-208ENST00000470463 ARVCFO00192 962 aa11.65□□□□□ -0.54
SND1-208ENST00000470463 ZNF185O15231 689 aa11.65□□□□□ -0.54
SND1-208ENST00000470463 NCK2O43639 380 aa11.65□□□□□ -0.54
SND1-208ENST00000470463 CEP104O60308 925 aa11.65□□□□□ -0.54
SND1-208ENST00000470463 HUS1O60921 280 aa11.65□□□□□ -0.54
SND1-208ENST00000470463 CTSHP09668 335 aa11.65□□□□□ -0.54
SND1-208ENST00000470463 COL6A1P12109 1028 aa11.65□□□□□ -0.54
SND1-208ENST00000470463 H2AFXP16104 143 aaPredicted RBP11.65□□□□□ -0.54
SND1-208ENST00000470463 CAPN2P17655 700 aa11.65□□□□□ -0.54
SND1-208ENST00000470463 BRD2P25440 801 aaKnown RBP11.65□□□□□ -0.54
SND1-208ENST00000470463 CTNNA1P35221 906 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms