RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 CDK7P50613 346 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 VAMP7P51809 220 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 CYP24A1Q07973 514 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 KCNMA1Q12791 1236 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 PSMD6Q15008 389 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 KIZQ2M2Z5 673 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 DCAF4L1Q3SXM0 396 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 DCAF17Q5H9S7 520 aaPredicted RBP7.17□□□□□ -1.26
VAMP3-202ENST00000470357 GDF6Q6KF10 455 aaPredicted RBP7.17□□□□□ -1.26
VAMP3-202ENST00000470357 SLC39A4Q6P5W5 647 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 NOTUMQ6P988 496 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 GBP6Q6ZN66 633 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 RUFY4Q6ZNE9 571 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 CHSY3Q70JA7 882 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 CD302Q8IX05 232 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 HACE1Q8IYU2 909 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 SLC43A3Q8NBI5 491 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 SPC24Q8NBT2 197 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 NEK11Q8NG66 645 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 SLC35C1Q96A29 364 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 FAM81BQ96LP2 452 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 FNBP1Q96RU3 617 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 TSPAN18Q96SJ8 248 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 LRFN3Q9BTN0 628 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 C1QTNF1Q9BXJ1 281 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 PCIF1Q9H4Z3 704 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 PTPRHQ9HD43 1115 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 TMEM39AQ9NV64 488 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 INTS13Q9NVM9 706 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 PDCD11Q14690 1871 aaKnown RBP7.17□□□□□ -1.26
VAMP3-202ENST00000470357 TRIP11Q15643 1979 aa7.17□□□□□ -1.26
VAMP3-202ENST00000470357 A0A1B0GUA9 196 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 A0A1W2PQJ5 194 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 ADARB2-AS1A8MUL3 147 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 GPR182O15218 404 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 TEX33O43247 280 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 TSPAN1O60635 241 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 PARNO95453 639 aaKnown RBP7.16□□□□□ -1.26
VAMP3-202ENST00000470357 CLTAP09496 248 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 ARF4P18085 180 aaPredicted RBP7.16□□□□□ -1.26
VAMP3-202ENST00000470357 TRIM21P19474 475 aaKnown RBP7.16□□□□□ -1.26
VAMP3-202ENST00000470357 NFKB1P19838 968 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 FMO5P49326 533 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 GSK3AP49840 483 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 MYL7Q01449 175 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 BFSP2Q13515 415 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 SYCP1Q15431 976 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 CCDC85BQ15834 202 aaPredicted RBP7.16□□□□□ -1.26
VAMP3-202ENST00000470357 EXOC3L4Q17RC7 722 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 MFSD5Q6N075 450 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 SLC27A1Q6PCB7 646 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 NT5DC4Q86YG4 428 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 CBWD2Q8IUF1 395 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 BRSK2Q8IWQ3 736 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 CAGE1Q8TC20 777 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 PARD3BQ8TEW8 1205 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 SAAL1Q96ER3 474 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 OSMRQ99650 979 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 MDFIQ99750 246 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 FAM213AQ9BRX8 229 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 CCDC94Q9BW85 323 aaPredicted RBP7.16□□□□□ -1.26
VAMP3-202ENST00000470357 CDT1Q9H211 546 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 EPHX3Q9H6B9 360 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 MINDY3Q9H8M7 445 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 C11orf16Q9NQ32 467 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 PLCB1Q9NQ66 1216 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 CHST12Q9NRB3 414 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 AGPAT5Q9NUQ2 364 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 RBAKQ9NYW8 714 aaPredicted RBP7.16□□□□□ -1.26
VAMP3-202ENST00000470357 GINS2Q9Y248 185 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 USTQ9Y2C2 406 aa7.16□□□□□ -1.26
VAMP3-202ENST00000470357 LUC7L2Q9Y383 392 aaKnown RBP7.16□□□□□ -1.26
VAMP3-202ENST00000470357 GOLGA8IPA6NC78 632 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 GOLGA8JA6NMD2 632 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 TISP43B9A030 160 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 AKR1B15C9JRZ8 316 aaPredicted RBP7.15□□□□□ -1.26
VAMP3-202ENST00000470357 ABLIM1O14639 778 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 ZC3H11AO75152 810 aaKnown RBP eCLIP7.15□□□□□ -1.26
VAMP3-202ENST00000470357 RPS6KA5O75582 802 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 ADRB2P07550 413 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 CCDC172P0C7W6 258 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 CSF2RAP15509 400 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 TNNI1P19237 187 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 THPOP40225 353 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 MXI1P50539 228 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 RAB27AP51159 221 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 YARSP54577 528 aaKnown RBP7.15□□□□□ -1.26
VAMP3-202ENST00000470357 ZBED6P86452 979 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 ZNF200P98182 395 aaPredicted RBP7.15□□□□□ -1.26
VAMP3-202ENST00000470357 TFF2Q03403 129 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 RBL2Q08999 1139 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 TMEM62Q0P6H9 643 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 TBX2Q13207 712 aaPredicted RBP7.15□□□□□ -1.26
VAMP3-202ENST00000470357 KRT39Q6A163 491 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 LINC00114Q6XXX2 140 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 ZNF365Q70YC5 407 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 CCDC186Q7Z3E2 898 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 CACNA2D4Q7Z3S7 1137 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 WDR49Q8IV35 697 aa7.15□□□□□ -1.26
VAMP3-202ENST00000470357 CACTINQ8WUQ7 758 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms