RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 NT5C1AQ9BXI3 368 aa16.13■□□□□ 0.17
COL4A5-203ENST00000470339 MRPL9Q9BYD2 267 aaKnown RBP16.13■□□□□ 0.17
COL4A5-203ENST00000470339 ACP6Q9NPH0 428 aa16.13■□□□□ 0.17
COL4A5-203ENST00000470339 PRDM5Q9NQX1 630 aaPredicted RBP16.13■□□□□ 0.17
COL4A5-203ENST00000470339 TBC1D13Q9NVG8 400 aa16.13■□□□□ 0.17
COL4A5-203ENST00000470339 MYO1AQ9UBC5 1043 aa16.13■□□□□ 0.17
COL4A5-203ENST00000470339 PCDHGC3Q9UN70 934 aa16.13■□□□□ 0.17
COL4A5-203ENST00000470339 MYH10P35580 1976 aa16.13■□□□□ 0.17
COL4A5-203ENST00000470339 TMEM189-UBE2V1I3L0A0 370 aa16.12■□□□□ 0.17
COL4A5-203ENST00000470339 CYB561D2O14569 222 aa16.12■□□□□ 0.17
COL4A5-203ENST00000470339 THAP12O43422 761 aa16.12■□□□□ 0.17
COL4A5-203ENST00000470339 BAIAP3O94812 1187 aa16.12■□□□□ 0.17
COL4A5-203ENST00000470339 LSM8O95777 96 aaKnown RBP16.12■□□□□ 0.17
COL4A5-203ENST00000470339 VDRP11473 427 aa16.12■□□□□ 0.17
COL4A5-203ENST00000470339 WARSP23381 471 aaKnown RBP16.12■□□□□ 0.17
COL4A5-203ENST00000470339 RGS19P49795 217 aa16.12■□□□□ 0.17
COL4A5-203ENST00000470339 NDST1P52848 882 aa16.12■□□□□ 0.17
COL4A5-203ENST00000470339 STILQ15468 1287 aa16.12■□□□□ 0.17
COL4A5-203ENST00000470339 CLEC16AQ2KHT3 1053 aa16.12■□□□□ 0.17
COL4A5-203ENST00000470339 TAF3Q5VWG9 929 aa16.12■□□□□ 0.17
COL4A5-203ENST00000470339 COLGALT2Q8IYK4 626 aa16.12■□□□□ 0.17
COL4A5-203ENST00000470339 RNF10Q8N5U6 811 aaKnown RBP16.12■□□□□ 0.17
COL4A5-203ENST00000470339 CASD1Q96PB1 797 aa16.12■□□□□ 0.17
COL4A5-203ENST00000470339 FAM193BQ96PV7 902 aaPredicted RBP16.12■□□□□ 0.17
COL4A5-203ENST00000470339 PCDHB18PQ96TA0 734 aa16.12■□□□□ 0.17
COL4A5-203ENST00000470339 ZNF518BQ9C0D4 1074 aa16.12■□□□□ 0.17
COL4A5-203ENST00000470339 ELOVL4Q9GZR5 314 aa16.12■□□□□ 0.17
COL4A5-203ENST00000470339 LACRTQ9GZZ8 138 aa16.12■□□□□ 0.17
COL4A5-203ENST00000470339 LZTFL1Q9NQ48 299 aa16.12■□□□□ 0.17
COL4A5-203ENST00000470339 SEPT11Q9NVA2 429 aaKnown RBP16.12■□□□□ 0.17
COL4A5-203ENST00000470339 ANKRD62A6NC57 917 aa16.11■□□□□ 0.17
COL4A5-203ENST00000470339 RCCD1A6NED2 376 aa16.11■□□□□ 0.17
COL4A5-203ENST00000470339 CASTOR2A6NHX0 329 aa16.11■□□□□ 0.17
COL4A5-203ENST00000470339 KIF5CO60282 957 aa16.11■□□□□ 0.17
COL4A5-203ENST00000470339 B3GAT3O94766 335 aa16.11■□□□□ 0.17
COL4A5-203ENST00000470339 CYP1A1P04798 512 aaPredicted RBP16.11■□□□□ 0.17
COL4A5-203ENST00000470339 UNGP13051 313 aaPredicted RBP16.11■□□□□ 0.17
COL4A5-203ENST00000470339 CSF2RAP15509 400 aa16.11■□□□□ 0.17
COL4A5-203ENST00000470339 IBSPP21815 317 aaPredicted RBP16.11■□□□□ 0.17
COL4A5-203ENST00000470339 ITGB8P26012 769 aa16.11■□□□□ 0.17
COL4A5-203ENST00000470339 GNL1P36915 607 aaPredicted RBP16.11■□□□□ 0.17
COL4A5-203ENST00000470339 RNASELQ05823 741 aaKnown RBP16.11■□□□□ 0.17
COL4A5-203ENST00000470339 CNGA2Q16280 664 aa16.11■□□□□ 0.17
COL4A5-203ENST00000470339 ACAD10Q6JQN1 1059 aa16.11■□□□□ 0.17
COL4A5-203ENST00000470339 CRYBG2Q8N1P7 616 aa16.11■□□□□ 0.17
COL4A5-203ENST00000470339 KBTBD7Q8WVZ9 684 aa16.11■□□□□ 0.17
COL4A5-203ENST00000470339 CALR3Q96L12 384 aaKnown RBP16.11■□□□□ 0.17
COL4A5-203ENST00000470339 SENP8Q96LD8 212 aa16.11■□□□□ 0.17
COL4A5-203ENST00000470339 MRPL45Q9BRJ2 306 aaKnown RBP16.11■□□□□ 0.17
COL4A5-203ENST00000470339 LHX5Q9H2C1 402 aa16.11■□□□□ 0.17
COL4A5-203ENST00000470339 PDCL3Q9H2J4 239 aa16.11■□□□□ 0.17
COL4A5-203ENST00000470339 SNX25Q9H3E2 840 aa16.11■□□□□ 0.17
COL4A5-203ENST00000470339 IL23AQ9NPF7 189 aa16.11■□□□□ 0.17
COL4A5-203ENST00000470339 PRKAG2Q9UGJ0 569 aa16.11■□□□□ 0.17
COL4A5-203ENST00000470339 DSEQ9UL01 958 aa16.11■□□□□ 0.17
COL4A5-203ENST00000470339 L1RE1Q9UN81 338 aa16.11■□□□□ 0.17
COL4A5-203ENST00000470339 A0A0A6YYK5 440 aaPredicted RBP16.1■□□□□ 0.17
COL4A5-203ENST00000470339 M0QZQ0 153 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 GABRDO14764 452 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 CAPN15O75808 1086 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 DDHD2O94830 711 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 FTLP02792 175 aaPredicted RBP16.1■□□□□ 0.17
COL4A5-203ENST00000470339 AMHP03971 560 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 CYP11A1P05108 521 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 TMEM253P0C7T8 217 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 CDH5P33151 784 aaPredicted RBP16.1■□□□□ 0.17
COL4A5-203ENST00000470339 LHX1P48742 406 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 GALCP54803 685 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 ETF1P62495 437 aaKnown RBP16.1■□□□□ 0.17
COL4A5-203ENST00000470339 PPIGQ13427 754 aaKnown RBP eCLIP16.1■□□□□ 0.175e-7■■■□□ 15.9
COL4A5-203ENST00000470339 TCEAL1Q15170 157 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 ZNF394Q53GI3 561 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 SGO2Q562F6 1265 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 CD300LGQ6UXG3 332 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 DSTYKQ6XUX3 929 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 ZNF280BQ86YH2 543 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 ADGRF2Q8IZF7 708 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 PDCL2Q8N4E4 241 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 OR6B3Q8NGW1 331 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 TOP1MTQ969P6 601 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 VCPIP1Q96JH7 1222 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 HEXIM2Q96MH2 286 aaKnown RBP16.1■□□□□ 0.17
COL4A5-203ENST00000470339 TWNKQ96RR1 684 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 PAAF1Q9BRP4 392 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 TMEM175Q9BSA9 504 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 PUF60Q9UHX1 559 aaKnown RBP16.1■□□□□ 0.17
COL4A5-203ENST00000470339 STXBP5LQ9Y2K9 1186 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 CEP83Q9Y592 693 aa16.1■□□□□ 0.17
COL4A5-203ENST00000470339 A0A0U1RQJ8 604 aa16.09■□□□□ 0.17
COL4A5-203ENST00000470339 A8MXQ7 604 aa16.09■□□□□ 0.17
COL4A5-203ENST00000470339 ODC1P11926 461 aa16.09■□□□□ 0.17
COL4A5-203ENST00000470339 CD19P15391 556 aa16.09■□□□□ 0.17
COL4A5-203ENST00000470339 BRD2P25440 801 aaKnown RBP16.09■□□□□ 0.17
COL4A5-203ENST00000470339 CENPCQ03188 943 aa16.09■□□□□ 0.17
COL4A5-203ENST00000470339 TIGD5Q53EQ6 642 aa16.09■□□□□ 0.17
COL4A5-203ENST00000470339 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.09■□□□□ 0.17
COL4A5-203ENST00000470339 PALB2Q86YC2 1186 aa16.09■□□□□ 0.17
COL4A5-203ENST00000470339 C3orf58Q8NDZ4 430 aa16.09■□□□□ 0.17
COL4A5-203ENST00000470339 ATRIPQ8WXE1 791 aa16.09■□□□□ 0.17
COL4A5-203ENST00000470339 CTNNBL1Q8WYA6 563 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms