RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 NDUFV1P49821 464 aa6.9□□□□□ -1.3
COL11A1-208ENST00000470170 ITIH3Q06033 890 aa6.9□□□□□ -1.3
COL11A1-208ENST00000470170 TUBB3Q13509 450 aa6.9□□□□□ -1.3
COL11A1-208ENST00000470170 HABP2Q14520 560 aaPredicted RBP6.9□□□□□ -1.3
COL11A1-208ENST00000470170 FAM90A1Q86YD7 464 aa6.9□□□□□ -1.3
COL11A1-208ENST00000470170 PSD4Q8NDX1 1056 aa6.9□□□□□ -1.3
COL11A1-208ENST00000470170 SARAFQ96BY9 339 aa6.9□□□□□ -1.3
COL11A1-208ENST00000470170 KRTAP9-8Q9BYQ0 159 aa6.9□□□□□ -1.3
COL11A1-208ENST00000470170 GPR35Q9HC97 309 aa6.9□□□□□ -1.3
COL11A1-208ENST00000470170 POLHQ9Y253 713 aa6.9□□□□□ -1.3
COL11A1-208ENST00000470170 NR2E3Q9Y5X4 410 aa6.9□□□□□ -1.3
COL11A1-208ENST00000470170 ADGRA2Q96PE1 1338 aa6.9□□□□□ -1.3
COL11A1-208ENST00000470170 GPD1P21695 349 aa6.89□□□□□ -1.31
COL11A1-208ENST00000470170 RECQLP46063 649 aaPredicted RBP6.89□□□□□ -1.31
COL11A1-208ENST00000470170 NXPH1P58417 271 aa6.89□□□□□ -1.31
COL11A1-208ENST00000470170 NOGQ13253 232 aa6.89□□□□□ -1.31
COL11A1-208ENST00000470170 TAF2Q6P1X5 1199 aa6.89□□□□□ -1.31
COL11A1-208ENST00000470170 ZNF788Q6ZQV5 615 aa6.89□□□□□ -1.31
COL11A1-208ENST00000470170 AMIGO2Q86SJ2 522 aa6.89□□□□□ -1.31
COL11A1-208ENST00000470170 TNPO1Q92973 898 aaKnown RBP6.89□□□□□ -1.31
COL11A1-208ENST00000470170 RGMAQ96B86 450 aa6.89□□□□□ -1.31
COL11A1-208ENST00000470170 CNPPD1Q9BV87 410 aa6.89□□□□□ -1.31
COL11A1-208ENST00000470170 TPSD1Q9BZJ3 242 aa6.89□□□□□ -1.31
COL11A1-208ENST00000470170 KLC4Q9NSK0 619 aa6.89□□□□□ -1.31
COL11A1-208ENST00000470170 ABCF2Q9UG63 623 aa6.89□□□□□ -1.31
COL11A1-208ENST00000470170 SNUPNO95149 360 aaKnown RBP6.88□□□□□ -1.31
COL11A1-208ENST00000470170 KIF20AO95235 890 aa6.88□□□□□ -1.31
COL11A1-208ENST00000470170 CHEK2O96017 543 aa6.88□□□□□ -1.31
COL11A1-208ENST00000470170 RARBP10826 455 aa6.88□□□□□ -1.31
COL11A1-208ENST00000470170 WT1P19544 449 aaPredicted RBP6.88□□□□□ -1.31
COL11A1-208ENST00000470170 FOXF2Q12947 444 aa6.88□□□□□ -1.31
COL11A1-208ENST00000470170 KIF22Q14807 665 aa6.88□□□□□ -1.31
COL11A1-208ENST00000470170 HEATR3Q7Z4Q2 680 aa6.88□□□□□ -1.31
COL11A1-208ENST00000470170 SPEF1Q9Y4P9 236 aa6.88□□□□□ -1.31
COL11A1-208ENST00000470170 SPATA31A3Q5VYP0 1347 aa6.87□□□□□ -1.31
COL11A1-208ENST00000470170 DTNBO60941 627 aa6.87□□□□□ -1.31
COL11A1-208ENST00000470170 ARIH2O95376 493 aa6.87□□□□□ -1.31
COL11A1-208ENST00000470170 FTLP02792 175 aaPredicted RBP6.87□□□□□ -1.31
COL11A1-208ENST00000470170 FTH1P19P0C7X4 201 aa6.87□□□□□ -1.31
COL11A1-208ENST00000470170 ITPKBP27987 946 aa6.87□□□□□ -1.31
COL11A1-208ENST00000470170 HNRNPA0Q13151 305 aaKnown RBP6.87□□□□□ -1.31
COL11A1-208ENST00000470170 USP45Q70EL2 814 aa6.87□□□□□ -1.31
COL11A1-208ENST00000470170 CATIPQ7Z7H3 387 aa6.87□□□□□ -1.31
COL11A1-208ENST00000470170 SH2D3CQ8N5H7 860 aa6.87□□□□□ -1.31
COL11A1-208ENST00000470170 ACTRT3Q9BYD9 372 aa6.87□□□□□ -1.31
COL11A1-208ENST00000470170 TINAGL1Q9GZM7 467 aaPredicted RBP6.87□□□□□ -1.31
COL11A1-208ENST00000470170 FEZ2Q9UHY8 353 aaPredicted RBP6.87□□□□□ -1.31
COL11A1-208ENST00000470170 ADAM21Q9UKJ8 722 aa6.87□□□□□ -1.31
COL11A1-208ENST00000470170 TRIAP1O43715 76 aa6.86□□□□□ -1.31
COL11A1-208ENST00000470170 URI1O94763 535 aaPredicted RBP6.86□□□□□ -1.31
COL11A1-208ENST00000470170 CDK4P11802 303 aa6.86□□□□□ -1.31
COL11A1-208ENST00000470170 TOB1P50616 345 aaPredicted RBP6.86□□□□□ -1.31
COL11A1-208ENST00000470170 HK3P52790 923 aa6.86□□□□□ -1.31
COL11A1-208ENST00000470170 RBM20Q5T481 1227 aaKnown RBP6.86□□□□□ -1.31
COL11A1-208ENST00000470170 THEMIS2Q5TEJ8 643 aa6.86□□□□□ -1.31
COL11A1-208ENST00000470170 RASAL3Q86YV0 1011 aa6.86□□□□□ -1.31
COL11A1-208ENST00000470170 SRRM1Q8IYB3 904 aaKnown RBP6.86□□□□□ -1.31
COL11A1-208ENST00000470170 PRR18Q8N4B5 295 aa6.86□□□□□ -1.31
COL11A1-208ENST00000470170 PBKQ96KB5 322 aa6.86□□□□□ -1.31
COL11A1-208ENST00000470170 HAPLN3Q96S86 360 aa6.86□□□□□ -1.31
COL11A1-208ENST00000470170 OSBPL9Q96SU4 736 aa6.86□□□□□ -1.31
COL11A1-208ENST00000470170 MRPL46Q9H2W6 279 aaKnown RBP6.86□□□□□ -1.31
COL11A1-208ENST00000470170 WDCPQ9H6R7 721 aa6.86□□□□□ -1.31
COL11A1-208ENST00000470170 MANSC4A6NHS7 340 aaPredicted RBP6.85□□□□□ -1.31
COL11A1-208ENST00000470170 M0QYG6 137 aa6.85□□□□□ -1.31
COL11A1-208ENST00000470170 SLC16A6O15403 523 aa6.85□□□□□ -1.31
COL11A1-208ENST00000470170 IL33O95760 270 aa6.85□□□□□ -1.31
COL11A1-208ENST00000470170 AHSGP02765 367 aa6.85□□□□□ -1.31
COL11A1-208ENST00000470170 NR2F6P10588 404 aa6.85□□□□□ -1.31
COL11A1-208ENST00000470170 ITGALP20701 1170 aa6.85□□□□□ -1.31
COL11A1-208ENST00000470170 MAP2K6P52564 334 aa6.85□□□□□ -1.31
COL11A1-208ENST00000470170 EXOSC10Q01780 885 aaKnown RBP6.85□□□□□ -1.31
COL11A1-208ENST00000470170 BRDTQ58F21 947 aaPredicted RBP6.85□□□□□ -1.31
COL11A1-208ENST00000470170 PPP1R3BQ86XI6 285 aa6.85□□□□□ -1.31
COL11A1-208ENST00000470170 CAMKK1Q8N5S9 505 aa6.85□□□□□ -1.31
COL11A1-208ENST00000470170 RFKQ969G6 155 aa6.85□□□□□ -1.31
COL11A1-208ENST00000470170 AMBRA1Q9C0C7 1298 aa6.85□□□□□ -1.31
COL11A1-208ENST00000470170 HOMER2Q9NSB8 354 aa6.85□□□□□ -1.31
COL11A1-208ENST00000470170 LMBRD1Q9NUN5 540 aa6.85□□□□□ -1.31
COL11A1-208ENST00000470170 DKK3Q9UBP4 350 aa6.85□□□□□ -1.31
COL11A1-208ENST00000470170 LUC7L2Q9Y383 392 aaKnown RBP6.85□□□□□ -1.31
COL11A1-208ENST00000470170 WNT6Q9Y6F9 365 aa6.85□□□□□ -1.31
COL11A1-208ENST00000470170 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.84□□□□□ -1.31
COL11A1-208ENST00000470170 WIPF3A6NGB9 483 aa6.84□□□□□ -1.31
COL11A1-208ENST00000470170 CGB1A6NKQ9 187 aa6.84□□□□□ -1.31
COL11A1-208ENST00000470170 POU2F2P09086 479 aa6.84□□□□□ -1.31
COL11A1-208ENST00000470170 TCF15Q12870 199 aa6.84□□□□□ -1.31
COL11A1-208ENST00000470170 TMEM240Q5SV17 173 aa6.84□□□□□ -1.31
COL11A1-208ENST00000470170 VPS53Q5VIR6 699 aa6.84□□□□□ -1.31
COL11A1-208ENST00000470170 PPP1R32Q7Z5V6 425 aa6.84□□□□□ -1.31
COL11A1-208ENST00000470170 USP37Q86T82 979 aa6.84□□□□□ -1.31
COL11A1-208ENST00000470170 CPA6Q8N4T0 437 aa6.84□□□□□ -1.31
COL11A1-208ENST00000470170 FKBP10Q96AY3 582 aa6.84□□□□□ -1.31
COL11A1-208ENST00000470170 SIK2Q9H0K1 926 aa6.84□□□□□ -1.31
COL11A1-208ENST00000470170 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.84□□□□□ -1.31
COL11A1-208ENST00000470170 ZDHHC8Q9ULC8 765 aa6.84□□□□□ -1.31
COL11A1-208ENST00000470170 PCDHA1Q9Y5I3 950 aa6.84□□□□□ -1.31
COL11A1-208ENST00000470170 RAD54BQ9Y620 910 aa6.84□□□□□ -1.31
COL11A1-208ENST00000470170 KAT6AQ92794 2004 aa6.84□□□□□ -1.31
COL11A1-208ENST00000470170 TTLL1O95922 423 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms