RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 PIAS3Q9Y6X2 628 aa18.91■□□□□ 0.62
COL7A1-208ENST00000470076 CACNA1AO00555 2505 aa18.91■□□□□ 0.62
COL7A1-208ENST00000470076 CYB561D2O14569 222 aa18.9■□□□□ 0.62
COL7A1-208ENST00000470076 IL18RAPO95256 599 aa18.9■□□□□ 0.62
COL7A1-208ENST00000470076 SYT1P21579 422 aa18.9■□□□□ 0.62
COL7A1-208ENST00000470076 ADSSP30520 456 aa18.9■□□□□ 0.62
COL7A1-208ENST00000470076 MLLT6P55198 1093 aaPredicted RBP18.9■□□□□ 0.62
COL7A1-208ENST00000470076 SMARCB1Q12824 385 aa18.9■□□□□ 0.62
COL7A1-208ENST00000470076 RESTQ13127 1097 aa18.9■□□□□ 0.62
COL7A1-208ENST00000470076 CRELD2Q6UXH1 353 aaPredicted RBP18.9■□□□□ 0.62
COL7A1-208ENST00000470076 YAF2Q8IY57 180 aa18.9■□□□□ 0.62
COL7A1-208ENST00000470076 THEM5Q8N1Q8 247 aa18.9■□□□□ 0.62
COL7A1-208ENST00000470076 TTC9BQ8N6N2 239 aa18.9■□□□□ 0.62
COL7A1-208ENST00000470076 SUMF1Q8NBK3 374 aa18.9■□□□□ 0.62
COL7A1-208ENST00000470076 ZBTB44Q8NCP5 570 aa18.9■□□□□ 0.62
COL7A1-208ENST00000470076 ATRIPQ8WXE1 791 aa18.9■□□□□ 0.62
COL7A1-208ENST00000470076 FAM3CQ92520 227 aa18.9■□□□□ 0.62
COL7A1-208ENST00000470076 DNAJC19Q96DA6 116 aa18.9■□□□□ 0.62
COL7A1-208ENST00000470076 HINFPQ9BQA5 517 aa18.9■□□□□ 0.62
COL7A1-208ENST00000470076 IER2Q9BTL4 223 aa18.9■□□□□ 0.62
COL7A1-208ENST00000470076 ZCWPW1Q9H0M4 648 aa18.9■□□□□ 0.62
COL7A1-208ENST00000470076 ZSCAN32Q9NX65 697 aa18.9■□□□□ 0.62
COL7A1-208ENST00000470076 NDRG2Q9UN36 371 aaKnown RBP18.9■□□□□ 0.62
COL7A1-208ENST00000470076 CEP250Q9BV73 2442 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 NUP210Q8TEM1 1887 aaPredicted RBP18.89■□□□□ 0.61
COL7A1-208ENST00000470076 MYMKA6NI61 221 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 ARNTLO00327 626 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 CHADO15335 359 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 FCHO2Q0JRZ9 810 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 MTAPQ13126 283 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 VEPH1Q14D04 833 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 SLC39A12Q504Y0 691 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 C1orf228Q6PIY5 440 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 MAMSTRQ6ZN01 415 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 CCDC73Q6ZRK6 1079 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 GAREM2Q75VX8 874 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 ERMP1Q7Z2K6 904 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 C2orf15Q8WU43 125 aaKnown RBP18.89■□□□□ 0.61
COL7A1-208ENST00000470076 NELL1Q92832 810 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 MSANTD3Q96H12 275 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 CLIC6Q96NY7 704 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 ACCSQ96QU6 501 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 PYM1Q9BRP8 204 aaKnown RBP18.89■□□□□ 0.61
COL7A1-208ENST00000470076 FAM126AQ9BYI3 521 aaPredicted RBP18.89■□□□□ 0.61
COL7A1-208ENST00000470076 IKZF4Q9H2S9 585 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 CHRDQ9H2X0 955 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 ATXN3LQ9H3M9 355 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 PRMT8Q9NR22 394 aaPredicted RBP18.89■□□□□ 0.61
COL7A1-208ENST00000470076 OLFML3Q9NRN5 406 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 MORC2Q9Y6X9 1032 aaPredicted RBP18.89■□□□□ 0.61
COL7A1-208ENST00000470076 NCANO14594 1321 aa18.89■□□□□ 0.61
COL7A1-208ENST00000470076 SOAT2O75908 522 aa18.88■□□□□ 0.61
COL7A1-208ENST00000470076 GABRR2P28476 465 aa18.88■□□□□ 0.61
COL7A1-208ENST00000470076 CEBPZQ03701 1054 aaKnown RBP18.88■□□□□ 0.61
COL7A1-208ENST00000470076 ALCAMQ13740 583 aa18.88■□□□□ 0.61
COL7A1-208ENST00000470076 SV2CQ496J9 727 aa18.88■□□□□ 0.61
COL7A1-208ENST00000470076 ARHGAP15Q53QZ3 475 aa18.88■□□□□ 0.61
COL7A1-208ENST00000470076 L1TD1Q5T7N2 865 aaKnown RBP18.88■□□□□ 0.61
COL7A1-208ENST00000470076 FAM173BQ6P4H8 233 aa18.88■□□□□ 0.61
COL7A1-208ENST00000470076 ARID3BQ8IVW6 561 aaPredicted RBP18.88■□□□□ 0.61
COL7A1-208ENST00000470076 EFCAB13Q8IY85 973 aa18.88■□□□□ 0.61
COL7A1-208ENST00000470076 FAM200AQ8TCP9 573 aa18.88■□□□□ 0.61
COL7A1-208ENST00000470076 SPPL2BQ8TCT7 592 aa18.88■□□□□ 0.61
COL7A1-208ENST00000470076 CSGALNACT1Q8TDX6 532 aa18.88■□□□□ 0.61
COL7A1-208ENST00000470076 RSPRY1Q96DX4 576 aa18.88■□□□□ 0.61
COL7A1-208ENST00000470076 INTS4Q96HW7 963 aaKnown RBP18.88■□□□□ 0.61
COL7A1-208ENST00000470076 ZNF560Q96MR9 790 aa18.88■□□□□ 0.61
COL7A1-208ENST00000470076 SEPT5Q99719 369 aaPredicted RBP18.88■□□□□ 0.61
COL7A1-208ENST00000470076 MKNK1Q9BUB5 465 aa18.88■□□□□ 0.61
COL7A1-208ENST00000470076 PCDHB13Q9Y5F0 798 aa18.88■□□□□ 0.61
COL7A1-208ENST00000470076 KPNA7A9QM74 516 aa18.87■□□□□ 0.61
COL7A1-208ENST00000470076 GCNT3O95395 438 aa18.87■□□□□ 0.61
COL7A1-208ENST00000470076 LDHAP00338 332 aaKnown RBP18.87■□□□□ 0.61
COL7A1-208ENST00000470076 PNPLA4P41247 253 aa18.87■□□□□ 0.61
COL7A1-208ENST00000470076 KCNA1Q09470 495 aa18.87■□□□□ 0.61
COL7A1-208ENST00000470076 PPP2R5DQ14738 602 aa18.87■□□□□ 0.61
COL7A1-208ENST00000470076 MGAT5BQ3V5L5 792 aa18.87■□□□□ 0.61
COL7A1-208ENST00000470076 STXBP5Q5T5C0 1151 aa18.87■□□□□ 0.61
COL7A1-208ENST00000470076 WSCD1Q658N2 575 aa18.87■□□□□ 0.61
COL7A1-208ENST00000470076 KIAA2013Q8IYS2 634 aa18.87■□□□□ 0.61
COL7A1-208ENST00000470076 FAM213AQ9BRX8 229 aa18.87■□□□□ 0.61
COL7A1-208ENST00000470076 C8orf33Q9H7E9 229 aaPredicted RBP18.87■□□□□ 0.61
COL7A1-208ENST00000470076 LMAN1LQ9HAT1 526 aa18.87■□□□□ 0.61
COL7A1-208ENST00000470076 OBP2AQ9NY56 170 aa18.87■□□□□ 0.61
COL7A1-208ENST00000470076 TBC1D7Q9P0N9 293 aa18.87■□□□□ 0.61
COL7A1-208ENST00000470076 DPYSL4O14531 572 aa18.86■□□□□ 0.61
COL7A1-208ENST00000470076 LILRB5O75023 590 aa18.86■□□□□ 0.61
COL7A1-208ENST00000470076 IDEP14735 1019 aa18.86■□□□□ 0.61
COL7A1-208ENST00000470076 ATF6P18850 670 aa18.86■□□□□ 0.61
COL7A1-208ENST00000470076 GARTP22102 1010 aa18.86■□□□□ 0.61
COL7A1-208ENST00000470076 CCNE1P24864 410 aa18.86■□□□□ 0.61
COL7A1-208ENST00000470076 WEE1P30291 646 aa18.86■□□□□ 0.61
COL7A1-208ENST00000470076 CDC25CP30307 473 aa18.86■□□□□ 0.61
COL7A1-208ENST00000470076 STAT6P42226 847 aa18.86■□□□□ 0.61
COL7A1-208ENST00000470076 SLC39A14Q15043 492 aa18.86■□□□□ 0.61
COL7A1-208ENST00000470076 TAF12Q16514 161 aa18.86■□□□□ 0.61
COL7A1-208ENST00000470076 ARHGAP29Q52LW3 1261 aa18.86■□□□□ 0.61
COL7A1-208ENST00000470076 GPR158Q5T848 1215 aa18.86■□□□□ 0.61
COL7A1-208ENST00000470076 TSSK4Q6SA08 328 aa18.86■□□□□ 0.61
COL7A1-208ENST00000470076 BRSK2Q8IWQ3 736 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms