RNA–Protein interactions for RNA: ENST00000469336.1

UBE3C-204, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-204ENST00000469336 SLC5A1P13866 664 aa6.7□□□□□ -1.34
UBE3C-204ENST00000469336 MCM7P33993 719 aa6.7□□□□□ -1.34
UBE3C-204ENST00000469336 SCNN1GP51170 649 aa6.7□□□□□ -1.34
UBE3C-204ENST00000469336 SOX8P57073 446 aa6.7□□□□□ -1.34
UBE3C-204ENST00000469336 TGFB2P61812 414 aa6.7□□□□□ -1.34
UBE3C-204ENST00000469336 TMPRSS6Q8IU80 811 aa6.7□□□□□ -1.34
UBE3C-204ENST00000469336 SYT12Q8IV01 421 aa6.7□□□□□ -1.34
UBE3C-204ENST00000469336 CELF5Q8N6W0 485 aaKnown RBP6.7□□□□□ -1.34
UBE3C-204ENST00000469336 KBTBD7Q8WVZ9 684 aa6.7□□□□□ -1.34
UBE3C-204ENST00000469336 CHFRQ96EP1 664 aa6.7□□□□□ -1.34
UBE3C-204ENST00000469336 GPR87Q9BY21 358 aa6.7□□□□□ -1.34
UBE3C-204ENST00000469336 NUP62CLQ9H1M0 184 aa6.7□□□□□ -1.34
UBE3C-204ENST00000469336 IKZF4Q9H2S9 585 aa6.7□□□□□ -1.34
UBE3C-204ENST00000469336 RSAD1Q9HA92 442 aa6.7□□□□□ -1.34
UBE3C-204ENST00000469336 GPR35Q9HC97 309 aa6.7□□□□□ -1.34
UBE3C-204ENST00000469336 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.7□□□□□ -1.34
UBE3C-204ENST00000469336 MED16Q9Y2X0 877 aa6.7□□□□□ -1.34
UBE3C-204ENST00000469336 PCDHGB6Q9Y5F9 930 aa6.7□□□□□ -1.34
UBE3C-204ENST00000469336 DENND4BO75064 1496 aaPredicted RBP6.7□□□□□ -1.34
UBE3C-204ENST00000469336 MBD5Q9P267 1494 aa6.7□□□□□ -1.34
UBE3C-204ENST00000469336 ISM1B1AKI9 464 aa6.69□□□□□ -1.34
UBE3C-204ENST00000469336 PQBP1O60828 265 aaKnown RBP6.69□□□□□ -1.34
UBE3C-204ENST00000469336 ITGB1P05556 798 aa6.69□□□□□ -1.34
UBE3C-204ENST00000469336 RPL17P18621 184 aaKnown RBP6.69□□□□□ -1.34
UBE3C-204ENST00000469336 EN2P19622 333 aaPredicted RBP6.69□□□□□ -1.34
UBE3C-204ENST00000469336 SLC6A2P23975 617 aa6.69□□□□□ -1.34
UBE3C-204ENST00000469336 SLC7A1P30825 629 aa6.69□□□□□ -1.34
UBE3C-204ENST00000469336 CHN2P52757 468 aa6.69□□□□□ -1.34
UBE3C-204ENST00000469336 ARFIP2P53365 341 aa6.69□□□□□ -1.34
UBE3C-204ENST00000469336 IRX6P78412 446 aaPredicted RBP6.69□□□□□ -1.34
UBE3C-204ENST00000469336 EXOSC9Q06265 439 aaKnown RBP6.69□□□□□ -1.34
UBE3C-204ENST00000469336 KRTAP5-3Q6L8H2 238 aa6.69□□□□□ -1.34
UBE3C-204ENST00000469336 NUP133Q8WUM0 1156 aa6.69□□□□□ -1.34
UBE3C-204ENST00000469336 SCAMP4Q969E2 229 aa6.69□□□□□ -1.34
UBE3C-204ENST00000469336 SUCLG2Q96I99 432 aa6.69□□□□□ -1.34
UBE3C-204ENST00000469336 TRIM54Q9BYV2 358 aa6.69□□□□□ -1.34
UBE3C-204ENST00000469336 SLAMF7Q9NQ25 335 aa6.69□□□□□ -1.34
UBE3C-204ENST00000469336 CHST12Q9NRB3 414 aa6.69□□□□□ -1.34
UBE3C-204ENST00000469336 ARHGEF12Q9NZN5 1544 aa6.69□□□□□ -1.34
UBE3C-204ENST00000469336 KIF7Q2M1P5 1343 aa6.69□□□□□ -1.34
UBE3C-204ENST00000469336 KIF15Q9NS87 1388 aa6.69□□□□□ -1.34
UBE3C-204ENST00000469336 CCDC144AA2RUR9 1427 aa6.68□□□□□ -1.34
UBE3C-204ENST00000469336 UHRF1BP1Q6BDS2 1440 aa6.68□□□□□ -1.34
UBE3C-204ENST00000469336 AGFG2O95081 481 aa6.68□□□□□ -1.34
UBE3C-204ENST00000469336 CHEK2O96017 543 aa6.68□□□□□ -1.34
UBE3C-204ENST00000469336 KITP10721 976 aa6.68□□□□□ -1.34
UBE3C-204ENST00000469336 HDCP19113 662 aa6.68□□□□□ -1.34
UBE3C-204ENST00000469336 GCSHP23434 173 aa6.68□□□□□ -1.34
UBE3C-204ENST00000469336 SLC25A3Q00325 362 aa6.68□□□□□ -1.34
UBE3C-204ENST00000469336 RALBP1Q15311 655 aa6.68□□□□□ -1.34
UBE3C-204ENST00000469336 UTP14CQ5TAP6 766 aaKnown RBP6.68□□□□□ -1.34
UBE3C-204ENST00000469336 AGAP9Q5VTM2 703 aa6.68□□□□□ -1.34
UBE3C-204ENST00000469336 METRNLQ641Q3 311 aa6.68□□□□□ -1.34
UBE3C-204ENST00000469336 IL31Q6EBC2 164 aa6.68□□□□□ -1.34
UBE3C-204ENST00000469336 MED25Q71SY5 747 aa6.68□□□□□ -1.34
UBE3C-204ENST00000469336 ZNF627Q7L945 461 aa6.68□□□□□ -1.34
UBE3C-204ENST00000469336 TBC1D15Q8TC07 691 aa6.68□□□□□ -1.34
UBE3C-204ENST00000469336 LARP4BQ92615 738 aaKnown RBP6.68□□□□□ -1.34
UBE3C-204ENST00000469336 DDX17Q92841 729 aaKnown RBP6.68□□□□□ -1.34
UBE3C-204ENST00000469336 DPH1Q9BZG8 443 aa6.68□□□□□ -1.34
UBE3C-204ENST00000469336 REXO4Q9GZR2 422 aaKnown RBP6.68□□□□□ -1.34
UBE3C-204ENST00000469336 SLC45A2Q9UMX9 530 aa6.68□□□□□ -1.34
UBE3C-204ENST00000469336 REXO2Q9Y3B8 237 aaKnown RBP6.68□□□□□ -1.34
UBE3C-204ENST00000469336 GAPVD1Q14C86 1478 aa6.67□□□□□ -1.34
UBE3C-204ENST00000469336 ZNF785A8K8V0 405 aa6.67□□□□□ -1.34
UBE3C-204ENST00000469336 DIRC3C9JPN6 131 aa6.67□□□□□ -1.34
UBE3C-204ENST00000469336 FOXN3O00409 490 aaPredicted RBP6.67□□□□□ -1.34
UBE3C-204ENST00000469336 TRIM24O15164 1050 aa6.67□□□□□ -1.34
UBE3C-204ENST00000469336 GNAI2P04899 355 aa6.67□□□□□ -1.34
UBE3C-204ENST00000469336 RRP1P56182 461 aaKnown RBP6.67□□□□□ -1.34
UBE3C-204ENST00000469336 RHBDL3P58872 404 aa6.67□□□□□ -1.34
UBE3C-204ENST00000469336 NOMO3P69849 1222 aa6.67□□□□□ -1.34
UBE3C-204ENST00000469336 NHLH2Q02577 135 aa6.67□□□□□ -1.34
UBE3C-204ENST00000469336 CNGB1Q14028 1251 aaPredicted RBP6.67□□□□□ -1.34
UBE3C-204ENST00000469336 HABP2Q14520 560 aaPredicted RBP6.67□□□□□ -1.34
UBE3C-204ENST00000469336 GLIPR1L2Q4G1C9 344 aa6.67□□□□□ -1.34
UBE3C-204ENST00000469336 SYCP2LQ5T4T6 812 aa6.67□□□□□ -1.34
UBE3C-204ENST00000469336 FAM102AQ5T9C2 384 aaPredicted RBP6.67□□□□□ -1.34
UBE3C-204ENST00000469336 RHOT2Q8IXI1 618 aa6.67□□□□□ -1.34
UBE3C-204ENST00000469336 FAM9BQ8IZU0 186 aa6.67□□□□□ -1.34
UBE3C-204ENST00000469336 SLC39A13Q96H72 371 aa6.67□□□□□ -1.34
UBE3C-204ENST00000469336 DCLRE1CQ96SD1 692 aaKnown RBP6.67□□□□□ -1.34
UBE3C-204ENST00000469336 SIK2Q9H0K1 926 aa6.67□□□□□ -1.34
UBE3C-204ENST00000469336 ZNF703Q9H7S9 590 aaPredicted RBP6.67□□□□□ -1.34
UBE3C-204ENST00000469336 AURKAIP1Q9NWT8 199 aaPredicted RBP6.67□□□□□ -1.34
UBE3C-204ENST00000469336 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.67□□□□□ -1.34
UBE3C-204ENST00000469336 PAXBP1Q9Y5B6 917 aa6.67□□□□□ -1.34
UBE3C-204ENST00000469336 RALGAPBQ86X10 1494 aa6.66□□□□□ -1.34
UBE3C-204ENST00000469336 GRXCR1A8MXD5 290 aa6.66□□□□□ -1.34
UBE3C-204ENST00000469336 LEFTY2O00292 366 aa6.66□□□□□ -1.34
UBE3C-204ENST00000469336 TBX3O15119 743 aa6.66□□□□□ -1.34
UBE3C-204ENST00000469336 RPS6KA4O75676 772 aa6.66□□□□□ -1.34
UBE3C-204ENST00000469336 CKBP12277 381 aa6.66□□□□□ -1.34
UBE3C-204ENST00000469336 APOBEC3AP31941 199 aaPredicted RBP6.66□□□□□ -1.34
UBE3C-204ENST00000469336 TM4SF4P48230 202 aa6.66□□□□□ -1.34
UBE3C-204ENST00000469336 KCNJ5P48544 419 aa6.66□□□□□ -1.34
UBE3C-204ENST00000469336 NEK3P51956 506 aa6.66□□□□□ -1.34
UBE3C-204ENST00000469336 PSMC1P62191 440 aaKnown RBP6.66□□□□□ -1.34
UBE3C-204ENST00000469336 SLFN5Q08AF3 891 aa6.66□□□□□ -1.34
UBE3C-204ENST00000469336 TCF15Q12870 199 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms