RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 EPHB3P54753 998 aa13.84□□□□□ -0.19
HDAC6-217ENST00000469223 GFPT1Q06210 699 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-217ENST00000469223 CYP4F3Q08477 520 aa13.84□□□□□ -0.19
HDAC6-217ENST00000469223 PPP2R5CQ13362 524 aa13.84□□□□□ -0.19
HDAC6-217ENST00000469223 MRPL58Q14197 206 aaKnown RBP13.84□□□□□ -0.19
HDAC6-217ENST00000469223 OTUD6AQ7L8S5 288 aa13.84□□□□□ -0.19
HDAC6-217ENST00000469223 CCDC148Q8NFR7 591 aa13.84□□□□□ -0.19
HDAC6-217ENST00000469223 RLN3Q8WXF3 142 aa13.84□□□□□ -0.19
HDAC6-217ENST00000469223 FNBP1Q96RU3 617 aa13.84□□□□□ -0.19
HDAC6-217ENST00000469223 RGL1Q9NZL6 768 aa13.84□□□□□ -0.19
HDAC6-217ENST00000469223 VPS54Q9P1Q0 977 aa13.84□□□□□ -0.19
HDAC6-217ENST00000469223 PCDHB9Q9Y5E1 797 aa13.84□□□□□ -0.19
HDAC6-217ENST00000469223 ANKRD17O75179 2603 aaKnown RBP13.84□□□□□ -0.19
HDAC6-217ENST00000469223 MYO18AQ92614 2054 aaKnown RBP13.84□□□□□ -0.19
HDAC6-217ENST00000469223 CYP3A7-CYP3A51PA0A087WV96 503 aa13.83□□□□□ -0.2
HDAC6-217ENST00000469223 PYCARD-AS1I3L0S3 204 aa13.83□□□□□ -0.2
HDAC6-217ENST00000469223 MAP3K13O43283 966 aa13.83□□□□□ -0.2
HDAC6-217ENST00000469223 EDN1P05305 212 aa13.83□□□□□ -0.2
HDAC6-217ENST00000469223 OR4Q2P0C623 313 aa13.83□□□□□ -0.2
HDAC6-217ENST00000469223 CYP3A7P24462 503 aa13.83□□□□□ -0.2
HDAC6-217ENST00000469223 ADD1P35611 737 aaKnown RBP13.83□□□□□ -0.2
HDAC6-217ENST00000469223 CTTNQ14247 550 aaKnown RBP13.83□□□□□ -0.2
HDAC6-217ENST00000469223 C8orf34Q49A92 452 aa13.83□□□□□ -0.2
HDAC6-217ENST00000469223 PEAR1Q5VY43 1037 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-217ENST00000469223 EEF1DP3Q658K8 133 aa13.83□□□□□ -0.2
HDAC6-217ENST00000469223 TOGARAM2Q6ZUX3 1019 aa13.83□□□□□ -0.2
HDAC6-217ENST00000469223 MARCH9Q86YJ5 346 aa13.83□□□□□ -0.2
HDAC6-217ENST00000469223 NAXDQ8IW45 347 aa13.83□□□□□ -0.2
HDAC6-217ENST00000469223 FRMD1Q8N878 549 aa13.83□□□□□ -0.2
HDAC6-217ENST00000469223 DYDC2Q96IM9 177 aa13.83□□□□□ -0.2
HDAC6-217ENST00000469223 SPACA7Q96KW9 195 aa13.83□□□□□ -0.2
HDAC6-217ENST00000469223 ADPGKQ9BRR6 497 aa13.83□□□□□ -0.2
HDAC6-217ENST00000469223 CLMPQ9H6B4 373 aa13.83□□□□□ -0.2
HDAC6-217ENST00000469223 DDX25Q9UHL0 483 aaKnown RBP13.83□□□□□ -0.2
HDAC6-217ENST00000469223 PILRBQ9UKJ0 227 aa13.83□□□□□ -0.2
HDAC6-217ENST00000469223 MAFFQ9ULX9 164 aa13.83□□□□□ -0.2
HDAC6-217ENST00000469223 SLC6A14Q9UN76 642 aa13.83□□□□□ -0.2
HDAC6-217ENST00000469223 APOBEC2Q9Y235 224 aaKnown RBP13.83□□□□□ -0.2
HDAC6-217ENST00000469223 CCL26Q9Y258 94 aa13.83□□□□□ -0.2
HDAC6-217ENST00000469223 COL5A1P20908 1838 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-217ENST00000469223 SOAT2O75908 522 aa13.82□□□□□ -0.2
HDAC6-217ENST00000469223 GJA4P35212 333 aa13.82□□□□□ -0.2
HDAC6-217ENST00000469223 P2RY2P41231 377 aa13.82□□□□□ -0.2
HDAC6-217ENST00000469223 SEC13P55735 322 aa13.82□□□□□ -0.2
HDAC6-217ENST00000469223 AMPD2Q01433 879 aa13.82□□□□□ -0.2
HDAC6-217ENST00000469223 PRPF4BQ13523 1007 aaKnown RBP13.82□□□□□ -0.2
HDAC6-217ENST00000469223 CDCA2Q69YH5 1023 aaPredicted RBP13.82□□□□□ -0.2
HDAC6-217ENST00000469223 NCAPH2Q6IBW4 605 aa13.82□□□□□ -0.2
HDAC6-217ENST00000469223 BEST2Q8NFU1 509 aa13.82□□□□□ -0.2
HDAC6-217ENST00000469223 OLIG1Q8TAK6 271 aa13.82□□□□□ -0.2
HDAC6-217ENST00000469223 TASP1Q9H6P5 420 aa13.82□□□□□ -0.2
HDAC6-217ENST00000469223 CAPN10Q9HC96 672 aa13.82□□□□□ -0.2
HDAC6-217ENST00000469223 NUB1Q9Y5A7 615 aa13.82□□□□□ -0.2
HDAC6-217ENST00000469223 KNTC1P50748 2209 aa13.82□□□□□ -0.2
HDAC6-217ENST00000469223 MARCH6O60337 910 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 DGAT1O75907 488 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 FGF19O95750 216 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 LIG1P18858 919 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 ITPKBP27987 946 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 WEE1P30291 646 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 HOXD12P35452 270 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 DPP6P42658 865 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 DUSP4Q13115 394 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 DUOXA1Q1HG43 343 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 DCAF4L1Q3SXM0 396 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 SLCO6A1Q86UG4 719 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 ZBTB8OSQ8IWT0 167 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 TTC9BQ8N6N2 239 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 SPRYD3Q8NCJ5 442 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 RIN3Q8TB24 985 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 CD101Q93033 1021 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 PSMG2Q969U7 264 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 CCDC43Q96MW1 224 aaKnown RBP13.81□□□□□ -0.2
HDAC6-217ENST00000469223 FZD8Q9H461 694 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 ZSWIM4Q9H7M6 989 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 POLMQ9NP87 494 aaPredicted RBP13.81□□□□□ -0.2
HDAC6-217ENST00000469223 GPRC5CQ9NQ84 441 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 TBX20Q9UMR3 447 aa13.81□□□□□ -0.2
HDAC6-217ENST00000469223 RBM19Q9Y4C8 960 aaKnown RBP13.81□□□□□ -0.2
HDAC6-217ENST00000469223 KNL1Q8NG31 2342 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 SMIM28A0A1B0GU29 152 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 ANTXRLA6NF34 631 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 SERPINF2P08697 491 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 HNRNPLP14866 589 aaKnown RBP eCLIP13.8□□□□□ -0.2
HDAC6-217ENST00000469223 MCM4P33991 863 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 ALDH1A3P47895 512 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 EPHA7Q15375 998 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 FAM187BQ17R55 369 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 C2orf27AQ580R0 203 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 CREB3L3Q68CJ9 461 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 LMBRD2Q68DH5 695 aaPredicted RBP13.8□□□□□ -0.2
HDAC6-217ENST00000469223 PPP4R3AQ6IN85 833 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 DNAJB7Q7Z6W7 309 aaPredicted RBP13.8□□□□□ -0.2
HDAC6-217ENST00000469223 CEP76Q8TAP6 659 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 DDX12PQ92771 950 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 EXOC4Q96A65 974 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 SUSD3Q96L08 255 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 GCNAQ96QF7 691 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 PRORYQ9H606 182 aa13.8□□□□□ -0.2
HDAC6-217ENST00000469223 DNAAF2Q9NVR5 837 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms