RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 TTC9BQ8N6N2 239 aa11.48□□□□□ -0.57
TGFBR3-205ENST00000468996 IQUBQ8NA54 791 aa11.48□□□□□ -0.57
TGFBR3-205ENST00000468996 GLIS3Q8NEA6 775 aa11.48□□□□□ -0.57
TGFBR3-205ENST00000468996 PJA1Q8NG27 643 aa11.48□□□□□ -0.57
TGFBR3-205ENST00000468996 SHKBP1Q8TBC3 707 aa11.48□□□□□ -0.57
TGFBR3-205ENST00000468996 ZSCAN18Q8TBC5 510 aaPredicted RBP11.48□□□□□ -0.57
TGFBR3-205ENST00000468996 GIPC2Q8TF65 315 aa11.48□□□□□ -0.57
TGFBR3-205ENST00000468996 SMARCD2Q92925 531 aa11.48□□□□□ -0.57
TGFBR3-205ENST00000468996 NKD2Q969F2 451 aaPredicted RBP11.48□□□□□ -0.57
TGFBR3-205ENST00000468996 FAM84AQ96KN4 292 aa11.48□□□□□ -0.57
TGFBR3-205ENST00000468996 ASB16Q96NS5 453 aa11.48□□□□□ -0.57
TGFBR3-205ENST00000468996 BCO2Q9BYV7 579 aa11.48□□□□□ -0.57
TGFBR3-205ENST00000468996 DNAJC25Q9H1X3 360 aa11.48□□□□□ -0.57
TGFBR3-205ENST00000468996 ATXN3LQ9H3M9 355 aa11.48□□□□□ -0.57
TGFBR3-205ENST00000468996 PDE11AQ9HCR9 933 aa11.48□□□□□ -0.57
TGFBR3-205ENST00000468996 HEBP1Q9NRV9 189 aa11.48□□□□□ -0.57
TGFBR3-205ENST00000468996 R3HCC1Q9Y3T6 440 aaKnown RBP11.48□□□□□ -0.57
TGFBR3-205ENST00000468996 MORC2Q9Y6X9 1032 aaPredicted RBP11.48□□□□□ -0.57
TGFBR3-205ENST00000468996 NOTCH4Q99466 2003 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 FRMD3A2A2Y4 597 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 PROB1E7EW31 1015 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 POLR2DO15514 142 aaKnown RBP11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 HUS1O60921 280 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 YEATS4O95619 227 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 ITGB3P05106 788 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 GLULP15104 373 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 PSMC3P17980 439 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 FCARP24071 287 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 EPHA5P54756 1037 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 BFSP1Q12934 665 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 E2F4Q16254 413 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 ITIH5Q86UX2 942 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 LRRTM3Q86VH5 581 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 NT5DC4Q86YG4 428 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 BRSK2Q8IWQ3 736 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 YAF2Q8IY57 180 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 BORCS6Q96GS4 357 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 NELL2Q99435 816 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 LPIN3Q9BQK8 851 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 TRIM9Q9C026 710 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 GPR88Q9GZN0 384 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 ZCWPW1Q9H0M4 648 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 TNMDQ9H2S6 317 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 KBTBD4Q9NVX7 518 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 SPATA6Q9NWH7 488 aaPredicted RBP11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 ABI2Q9NYB9 513 aaPredicted RBP11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 ASB3Q9Y575 518 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 R4GN57 208 aa11.47□□□□□ -0.57
TGFBR3-205ENST00000468996 WDR87Q6ZQQ6 2873 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 ZNF233A6NK53 670 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 HEPACAM2A8MVW5 462 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 ZNF263O14978 683 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 F13A1P00488 732 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 PDIA4P13667 645 aaKnown RBP11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 GABRR2P28476 465 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 CASP1P29466 404 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 PNPLA4P41247 253 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 RBP5P82980 135 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 VEPH1Q14D04 833 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 STXBP5Q5T5C0 1151 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 LMBRD2Q68DH5 695 aaPredicted RBP11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 SCARA3Q6AZY7 606 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 VITQ6UXI7 678 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 ZNF852Q6ZMS4 543 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 ARID3BQ8IVW6 561 aaPredicted RBP11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 DCP1BQ8IZD4 617 aaKnown RBP11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 GPD1LQ8N335 351 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 C1orf127Q8N9H9 656 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 RDH13Q8NBN7 331 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 IRF7Q92985 503 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 PSMG2Q969U7 264 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 ZNF560Q96MR9 790 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 DDX23Q9BUQ8 820 aaKnown RBP11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 LRRC3Q9BY71 257 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 BLZF1Q9H2G9 400 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 CUEDC2Q9H467 287 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 ZNF334Q9HCZ1 680 aaPredicted RBP11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 LTB4R2Q9NPC1 389 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 FAM13BQ9NYF5 915 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 DLGAP2Q9P1A6 1054 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 NDRG2Q9UN36 371 aaKnown RBP11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 PCDHA7Q9UN72 937 aa11.46□□□□□ -0.57
TGFBR3-205ENST00000468996 USP34Q70CQ2 3546 aa11.45□□□□□ -0.58
TGFBR3-205ENST00000468996 PRR23AA6NEV1 266 aa11.45□□□□□ -0.58
TGFBR3-205ENST00000468996 DPYSL4O14531 572 aa11.45□□□□□ -0.58
TGFBR3-205ENST00000468996 NCAM2O15394 837 aa11.45□□□□□ -0.58
TGFBR3-205ENST00000468996 LAMTOR5O43504 91 aa11.45□□□□□ -0.58
TGFBR3-205ENST00000468996 PRPF40AO75400 957 aaKnown RBP11.45□□□□□ -0.58
TGFBR3-205ENST00000468996 FGF19O95750 216 aa11.45□□□□□ -0.58
TGFBR3-205ENST00000468996 TMEM191BP0C7N4 346 aa11.45□□□□□ -0.58
TGFBR3-205ENST00000468996 SP9P0CG40 484 aa11.45□□□□□ -0.58
TGFBR3-205ENST00000468996 HOXD13P35453 343 aa11.45□□□□□ -0.58
TGFBR3-205ENST00000468996 AFMP43652 599 aa11.45□□□□□ -0.58
TGFBR3-205ENST00000468996 TSPY1Q01534 308 aa11.45□□□□□ -0.58
TGFBR3-205ENST00000468996 DNM1Q05193 864 aaKnown RBP11.45□□□□□ -0.58
TGFBR3-205ENST00000468996 PKP1Q13835 747 aa11.45□□□□□ -0.58
TGFBR3-205ENST00000468996 ARHGAP15Q53QZ3 475 aa11.45□□□□□ -0.58
TGFBR3-205ENST00000468996 GPR158Q5T848 1215 aa11.45□□□□□ -0.58
TGFBR3-205ENST00000468996 GAREM2Q75VX8 874 aa11.45□□□□□ -0.58
TGFBR3-205ENST00000468996 TMC8Q8IU68 726 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms