RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 ZNF575Q86XF7 245 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 EXOC8Q8IYI6 725 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 RNF169Q8NCN4 708 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 TFAP2CQ92754 450 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 TNPO1Q92973 898 aaKnown RBP6.29□□□□□ -1.4
LSM5-209ENST00000468872 TNIP3Q96KP6 325 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 ARPC5LQ9BPX5 153 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 TEX101Q9BY14 249 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 NLRC4Q9NPP4 1024 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.29□□□□□ -1.4
LSM5-209ENST00000468872 POGKQ9P215 609 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 CORO2BQ9UQ03 480 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 COL4A3Q01955 1670 aa6.29□□□□□ -1.4
LSM5-209ENST00000468872 RHPN2P1A8MT19 583 aa6.28□□□□□ -1.4
LSM5-209ENST00000468872 ZNF185O15231 689 aa6.28□□□□□ -1.4
LSM5-209ENST00000468872 NDUFA10O95299 355 aa6.28□□□□□ -1.4
LSM5-209ENST00000468872 ZKSCAN1P17029 563 aaPredicted RBP6.28□□□□□ -1.4
LSM5-209ENST00000468872 BMP5P22003 454 aa6.28□□□□□ -1.4
LSM5-209ENST00000468872 CASP5P51878 434 aa6.28□□□□□ -1.4
LSM5-209ENST00000468872 SOX8P57073 446 aa6.28□□□□□ -1.4
LSM5-209ENST00000468872 CLRN1P58418 232 aa6.28□□□□□ -1.4
LSM5-209ENST00000468872 RAP2BP61225 183 aa6.28□□□□□ -1.4
LSM5-209ENST00000468872 EXOSC9Q06265 439 aaKnown RBP6.28□□□□□ -1.4
LSM5-209ENST00000468872 BEAN1Q3B7T3 259 aa6.28□□□□□ -1.4
LSM5-209ENST00000468872 EMC10Q5UCC4 262 aa6.28□□□□□ -1.4
LSM5-209ENST00000468872 UBE3BQ7Z3V4 1068 aa6.28□□□□□ -1.4
LSM5-209ENST00000468872 FAM186BQ8IYM0 893 aa6.28□□□□□ -1.4
LSM5-209ENST00000468872 CRAMP1Q96RY5 1269 aa6.28□□□□□ -1.4
LSM5-209ENST00000468872 P2RX7Q99572 595 aaKnown RBP6.28□□□□□ -1.4
LSM5-209ENST00000468872 KIAA1586Q9HCI6 787 aa6.28□□□□□ -1.4
LSM5-209ENST00000468872 SLAMF7Q9NQ25 335 aa6.28□□□□□ -1.4
LSM5-209ENST00000468872 CNNM1Q9NRU3 951 aa6.28□□□□□ -1.4
LSM5-209ENST00000468872 FBXO34Q9NWN3 711 aa6.28□□□□□ -1.4
LSM5-209ENST00000468872 PIH1D1Q9NWS0 290 aaKnown RBP6.28□□□□□ -1.4
LSM5-209ENST00000468872 ANKFY1Q9P2R3 1169 aa6.28□□□□□ -1.4
LSM5-209ENST00000468872 CPNE7Q9UBL6 633 aa6.28□□□□□ -1.4
LSM5-209ENST00000468872 LOC102724159A0A0B4J2E5 919 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 ISM1B1AKI9 464 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 RASA4BC9J798 803 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 KPNA5O15131 536 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 RASA4O43374 803 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 PPFIA2O75334 1257 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 SLC43A1O75387 559 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 BRAFP15056 766 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 EN2P19622 333 aaPredicted RBP6.27□□□□□ -1.41
LSM5-209ENST00000468872 ADRA1BP35368 520 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 PHKA1P46020 1223 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 ARFIP2P53365 341 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 FMO1Q01740 532 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 PWP2Q15269 919 aaKnown RBP6.27□□□□□ -1.41
LSM5-209ENST00000468872 CNGA2Q16280 664 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 PDCD4Q53EL6 469 aaKnown RBP6.27□□□□□ -1.41
LSM5-209ENST00000468872 GORABQ5T7V8 394 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 SESTD1Q86VW0 696 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 BEND2Q8NDZ0 799 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 ZFP28Q8NHY6 868 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 SGCZQ96LD1 299 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 CCDC138Q96M89 665 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 PACSIN1Q9BY11 444 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 TRIM54Q9BYV2 358 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 SERHL2Q9H4I8 314 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 MYH16Q9H6N6 1097 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 GNL3LQ9NVN8 582 aaKnown RBP6.27□□□□□ -1.41
LSM5-209ENST00000468872 STK32BQ9NY57 414 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 DKK2Q9UBU2 259 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 ZDHHC8Q9ULC8 765 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 SLC45A2Q9UMX9 530 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 DMTF1Q9Y222 760 aa6.27□□□□□ -1.41
LSM5-209ENST00000468872 LMNAP02545 664 aaKnown RBP6.26□□□□□ -1.41
LSM5-209ENST00000468872 GNAI3P08754 354 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 BMPR1AP36894 532 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 ZEB1P37275 1124 aaPredicted RBP6.26□□□□□ -1.41
LSM5-209ENST00000468872 SUMO3P55854 103 aaPredicted RBP6.26□□□□□ -1.41
LSM5-209ENST00000468872 GNAI1P63096 354 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 TAP1Q03518 808 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 ZNF543Q08ER8 600 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 KIF22Q14807 665 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 FAM102AQ5T9C2 384 aaPredicted RBP6.26□□□□□ -1.41
LSM5-209ENST00000468872 HECTD2Q5U5R9 776 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 METRNLQ641Q3 311 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 SKAP1Q86WV1 359 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 CERS3Q8IU89 383 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 ARHGEF19Q8IW93 802 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 SMC5Q8IY18 1101 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 KBTBD7Q8WVZ9 684 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 RIPOR3Q96MK2 946 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 WDR11Q9BZH6 1224 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 TOR3AQ9H497 397 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 CYP4F11Q9HBI6 524 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 ZNF287Q9HBT7 754 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 FAM30AQ9NZY2 134 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 JKAMPQ9P055 326 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 OGDHLQ9ULD0 1010 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 SNX13Q9Y5W8 968 aa6.26□□□□□ -1.41
LSM5-209ENST00000468872 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.26□□□□□ -1.41
LSM5-209ENST00000468872 EIF3JO75822 258 aaKnown RBP6.25□□□□□ -1.41
LSM5-209ENST00000468872 GJB1P08034 283 aa6.25□□□□□ -1.41
LSM5-209ENST00000468872 SPATA31D3P0C874 917 aa6.25□□□□□ -1.41
LSM5-209ENST00000468872 RPL17P18621 184 aaKnown RBP6.25□□□□□ -1.41
LSM5-209ENST00000468872 NOMO3P69849 1222 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms