RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 C1orf127Q8N9H9 656 aa20.57■□□□□ 0.88
COL7A1-207ENST00000467985 ATAD1Q8NBU5 361 aa20.57■□□□□ 0.88
COL7A1-207ENST00000467985 OR10T2Q8NGX3 314 aa20.57■□□□□ 0.88
COL7A1-207ENST00000467985 HPS3Q969F9 1004 aa20.57■□□□□ 0.88
COL7A1-207ENST00000467985 BORCS6Q96GS4 357 aa20.57■□□□□ 0.88
COL7A1-207ENST00000467985 ZCWPW1Q9H0M4 648 aa20.57■□□□□ 0.88
COL7A1-207ENST00000467985 AGAP1Q9UPQ3 857 aa20.57■□□□□ 0.88
COL7A1-207ENST00000467985 R3HCC1Q9Y3T6 440 aaKnown RBP20.57■□□□□ 0.88
COL7A1-207ENST00000467985 PVALEFA0A1B0GWK0 134 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 H0Y858 1186 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 ITGB3P05106 788 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 TMEM191BP0C7N4 346 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 CCR2P41597 374 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 WNT7BP56706 349 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 STARD6P59095 220 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 RBP5P82980 135 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 PRKCQQ04759 706 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 SLC39A12Q504Y0 691 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 WSCD1Q658N2 575 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 DCP1BQ8IZD4 617 aaKnown RBP20.56■□□□□ 0.88
COL7A1-207ENST00000467985 HS6ST3Q8IZP7 471 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 DTWD2Q8NBA8 298 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 GLIS3Q8NEA6 775 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 SMARCD2Q92925 531 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 ASB16Q96NS5 453 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 CRISPLD1Q9H336 500 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 ZFP14Q9HCL3 533 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 PDE11AQ9HCR9 933 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 SLC27A5Q9Y2P5 690 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 SIT1Q9Y3P8 196 aa20.56■□□□□ 0.88
COL7A1-207ENST00000467985 HUS1O60921 280 aa20.55■□□□□ 0.88
COL7A1-207ENST00000467985 SLFN14P0C7P3 912 aa20.55■□□□□ 0.88
COL7A1-207ENST00000467985 HOXD13P35453 343 aa20.55■□□□□ 0.88
COL7A1-207ENST00000467985 EHHADHQ08426 723 aa20.55■□□□□ 0.88
COL7A1-207ENST00000467985 FAM78AQ5JUQ0 283 aa20.55■□□□□ 0.88
COL7A1-207ENST00000467985 TANGO2Q6ICL3 276 aa20.55■□□□□ 0.88
COL7A1-207ENST00000467985 TMEM86AQ8N2M4 240 aa20.55■□□□□ 0.88
COL7A1-207ENST00000467985 CSGALNACT2Q8N6G5 542 aa20.55■□□□□ 0.88
COL7A1-207ENST00000467985 SPPL2BQ8TCT7 592 aa20.55■□□□□ 0.88
COL7A1-207ENST00000467985 PSMG2Q969U7 264 aa20.55■□□□□ 0.88
COL7A1-207ENST00000467985 ANKRD36BP1Q96IX9 119 aa20.55■□□□□ 0.88
COL7A1-207ENST00000467985 TMEM209Q96SK2 561 aa20.55■□□□□ 0.88
COL7A1-207ENST00000467985 TRPV4Q9HBA0 871 aa20.55■□□□□ 0.88
COL7A1-207ENST00000467985 HSPBP1Q9NZL4 362 aa20.55■□□□□ 0.88
COL7A1-207ENST00000467985 CGNQ9P2M7 1197 aaKnown RBP20.55■□□□□ 0.88
COL7A1-207ENST00000467985 MOSPD3O75425 235 aa20.54■□□□□ 0.88
COL7A1-207ENST00000467985 TNNC2P02585 160 aa20.54■□□□□ 0.88
COL7A1-207ENST00000467985 FCARP24071 287 aa20.54■□□□□ 0.88
COL7A1-207ENST00000467985 TSPY1Q01534 308 aa20.54■□□□□ 0.88
COL7A1-207ENST00000467985 MYO1EQ12965 1108 aa20.54■□□□□ 0.88
COL7A1-207ENST00000467985 SNW1Q13573 536 aaKnown RBP20.54■□□□□ 0.88
COL7A1-207ENST00000467985 VEPH1Q14D04 833 aa20.54■□□□□ 0.88
COL7A1-207ENST00000467985 MLF2Q15773 248 aaPredicted RBP20.54■□□□□ 0.88
COL7A1-207ENST00000467985 DUOXA2Q1HG44 320 aa20.54■□□□□ 0.88
COL7A1-207ENST00000467985 SLC44A4Q53GD3 710 aa20.54■□□□□ 0.88
COL7A1-207ENST00000467985 HS2ST1Q7LGA3 356 aa20.54■□□□□ 0.88
COL7A1-207ENST00000467985 SPATA18Q8TC71 538 aa20.54■□□□□ 0.88
COL7A1-207ENST00000467985 E2F7Q96AV8 911 aa20.54■□□□□ 0.88
COL7A1-207ENST00000467985 LRRC3Q9BY71 257 aa20.54■□□□□ 0.88
COL7A1-207ENST00000467985 MTMR12Q9C0I1 747 aa20.54■□□□□ 0.88
COL7A1-207ENST00000467985 DNAJC25Q9H1X3 360 aa20.54■□□□□ 0.88
COL7A1-207ENST00000467985 SLITRK6Q9H5Y7 841 aa20.54■□□□□ 0.88
COL7A1-207ENST00000467985 AGPAT3Q9NRZ7 376 aa20.54■□□□□ 0.88
COL7A1-207ENST00000467985 INTS13Q9NVM9 706 aa20.54■□□□□ 0.88
COL7A1-207ENST00000467985 GDAP2Q9NXN4 497 aa20.54■□□□□ 0.88
COL7A1-207ENST00000467985 USP25Q9UHP3 1055 aa20.54■□□□□ 0.88
COL7A1-207ENST00000467985 ATP6V1DQ9Y5K8 247 aa20.54■□□□□ 0.88
COL7A1-207ENST00000467985 KRT19P08727 400 aa20.53■□□□□ 0.88
COL7A1-207ENST00000467985 KRT85P78386 507 aa20.53■□□□□ 0.88
COL7A1-207ENST00000467985 BFSP1Q12934 665 aa20.53■□□□□ 0.88
COL7A1-207ENST00000467985 NFE2Q16621 373 aaPredicted RBP20.53■□□□□ 0.88
COL7A1-207ENST00000467985 POTEHQ6S545 545 aa20.53■□□□□ 0.88
COL7A1-207ENST00000467985 DNAJB7Q7Z6W7 309 aaPredicted RBP20.53■□□□□ 0.88
COL7A1-207ENST00000467985 TMC8Q8IU68 726 aa20.53■□□□□ 0.88
COL7A1-207ENST00000467985 PJA1Q8NG27 643 aa20.53■□□□□ 0.88
COL7A1-207ENST00000467985 CXorf38Q8TB03 319 aa20.53■□□□□ 0.88
COL7A1-207ENST00000467985 SHKBP1Q8TBC3 707 aa20.53■□□□□ 0.88
COL7A1-207ENST00000467985 SCFD1Q8WVM8 642 aa20.53■□□□□ 0.88
COL7A1-207ENST00000467985 DNASE1L2Q92874 299 aa20.53■□□□□ 0.88
COL7A1-207ENST00000467985 SEPT5Q99719 369 aaPredicted RBP20.53■□□□□ 0.88
COL7A1-207ENST00000467985 DDX23Q9BUQ8 820 aaKnown RBP20.53■□□□□ 0.88
COL7A1-207ENST00000467985 BLZF1Q9H2G9 400 aa20.53■□□□□ 0.88
COL7A1-207ENST00000467985 FAM86C1Q9NVL1 165 aa20.53■□□□□ 0.88
COL7A1-207ENST00000467985 KANSL1LA0AUZ9 987 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 TGFB1I1O43294 461 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 CMA1P23946 247 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 AFMP43652 599 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 MYL7Q01449 175 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 CUL4BQ13620 913 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 TEAD2Q15562 447 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 SNRNP35Q16560 246 aaKnown RBP20.52■□□□□ 0.88
COL7A1-207ENST00000467985 BMT2Q1RMZ1 405 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 MGAT5BQ3V5L5 792 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 CBWD2Q8IUF1 395 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 WDR49Q8IV35 697 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 PDCL2Q8N4E4 241 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 TTC9BQ8N6N2 239 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 TOP6BLQ8N6T0 577 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 ZSCAN18Q8TBC5 510 aaPredicted RBP20.52■□□□□ 0.88
COL7A1-207ENST00000467985 FAM200AQ8TCP9 573 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms