RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 PIK3CAP42336 1068 aa11.86□□□□□ -0.51
MSH5-212ENST00000467319 KCNQ1P51787 676 aa11.86□□□□□ -0.51
MSH5-212ENST00000467319 MRPS5P82675 430 aaKnown RBP11.86□□□□□ -0.51
MSH5-212ENST00000467319 STX1AQ16623 288 aa11.86□□□□□ -0.51
MSH5-212ENST00000467319 CBWD6Q4V339 395 aa11.86□□□□□ -0.51
MSH5-212ENST00000467319 DCAF17Q5H9S7 520 aaPredicted RBP11.86□□□□□ -0.51
MSH5-212ENST00000467319 CBWD3Q5JTY5 395 aa11.86□□□□□ -0.51
MSH5-212ENST00000467319 CBWD5Q5RIA9 395 aa11.86□□□□□ -0.51
MSH5-212ENST00000467319 KRT39Q6A163 491 aa11.86□□□□□ -0.51
MSH5-212ENST00000467319 CAVIN1Q6NZI2 390 aaKnown RBP11.86□□□□□ -0.51
MSH5-212ENST00000467319 OSTM1Q86WC4 334 aa11.86□□□□□ -0.51
MSH5-212ENST00000467319 PALB2Q86YC2 1186 aa11.86□□□□□ -0.51
MSH5-212ENST00000467319 IRF2BP1Q8IU81 584 aa11.86□□□□□ -0.51
MSH5-212ENST00000467319 KREMEN2Q8NCW0 462 aa11.86□□□□□ -0.51
MSH5-212ENST00000467319 ZNF461Q8TAF7 563 aa11.86□□□□□ -0.51
MSH5-212ENST00000467319 FEZF2Q8TBJ5 459 aa11.86□□□□□ -0.51
MSH5-212ENST00000467319 TAF4BQ92750 862 aa11.86□□□□□ -0.51
MSH5-212ENST00000467319 ZNF707Q96C28 371 aaPredicted RBP11.86□□□□□ -0.51
MSH5-212ENST00000467319 PKMYT1Q99640 499 aa11.86□□□□□ -0.51
MSH5-212ENST00000467319 ZCWPW1Q9H0M4 648 aa11.86□□□□□ -0.51
MSH5-212ENST00000467319 ZDHHC7Q9NXF8 308 aa11.86□□□□□ -0.51
MSH5-212ENST00000467319 DPP7Q9UHL4 492 aa11.86□□□□□ -0.51
MSH5-212ENST00000467319 COQ4Q9Y3A0 265 aa11.86□□□□□ -0.51
MSH5-212ENST00000467319 USP15Q9Y4E8 981 aaPredicted RBP11.86□□□□□ -0.51
MSH5-212ENST00000467319 CUL9Q8IWT3 2517 aa11.86□□□□□ -0.51
MSH5-212ENST00000467319 TULP1O00294 542 aaPredicted RBP11.85□□□□□ -0.51
MSH5-212ENST00000467319 PHACTR2O75167 634 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 ZMYND10O75800 440 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 OR4Q2P0C623 313 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 ATF2P15336 505 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 WARSP23381 471 aaKnown RBP11.85□□□□□ -0.51
MSH5-212ENST00000467319 ASPAP45381 313 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 NOP14P78316 857 aaKnown RBP11.85□□□□□ -0.51
MSH5-212ENST00000467319 ITIH3Q06033 890 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 GPR17Q13304 367 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 TRPC3Q13507 836 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 SMAD2Q15796 467 aaKnown RBP11.85□□□□□ -0.51
MSH5-212ENST00000467319 CLUL1Q15846 466 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 PUS10Q3MIT2 529 aaKnown RBP11.85□□□□□ -0.51
MSH5-212ENST00000467319 CCDC40Q4G0X9 1142 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 PTCRAQ6ISU1 281 aaPredicted RBP11.85□□□□□ -0.51
MSH5-212ENST00000467319 ELMSAN1Q6PJG2 1045 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 EP400NLQ6ZTU2 488 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 C11orf57Q6ZUT1 292 aaPredicted RBP11.85□□□□□ -0.51
MSH5-212ENST00000467319 RTL10Q7L3V2 364 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 TCEAL8Q8IYN2 117 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 CNOT6LQ96LI5 555 aaKnown RBP11.85□□□□□ -0.51
MSH5-212ENST00000467319 TMEM209Q96SK2 561 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 SRRTQ9BXP5 876 aaKnown RBP11.85□□□□□ -0.51
MSH5-212ENST00000467319 BCO2Q9BYV7 579 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 ADAM7Q9H2U9 754 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 SMYD3Q9H7B4 428 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 AFF4Q9UHB7 1163 aaKnown RBP11.85□□□□□ -0.51
MSH5-212ENST00000467319 CDH22Q9UJ99 828 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 MAFFQ9ULX9 164 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 POLIQ9UNA4 740 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 NME7Q9Y5B8 376 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 NCOR1O75376 2440 aa11.85□□□□□ -0.51
MSH5-212ENST00000467319 PTPRDP23468 1912 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 MTMR11A4FU01 709 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 RFPL2O75678 378 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 SEC24AO95486 1093 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 FGFR1OPO95684 399 aaKnown RBP11.84□□□□□ -0.51
MSH5-212ENST00000467319 C8AP07357 584 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 HNRNPA1P09651 372 aaKnown RBP eCLIP11.84□□□□□ -0.51
MSH5-212ENST00000467319 FAM163BP0C2L3 166 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 SPATA31D3P0C874 917 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 BMP1P13497 986 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 CPB1P15086 417 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 LHX1P48742 406 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 FMO5P49326 533 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 TNNC1P63316 161 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 MYL7Q01449 175 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 TYRO3Q06418 890 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 SGSM1Q2NKQ1 1148 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 WDR72Q3MJ13 1102 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 ZNF667Q5HYK9 610 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 TJAP1Q5JTD0 557 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 RARS2Q5T160 578 aaKnown RBP11.84□□□□□ -0.51
MSH5-212ENST00000467319 LIN9Q5TKA1 542 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 TCERG1LQ5VWI1 586 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 CYP26C1Q6V0L0 522 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 RNF19BQ6ZMZ0 732 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 SPATA31D4Q6ZUB0 917 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 GPR149Q86SP6 731 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 METTL23Q86XA0 190 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 C12orf76Q8N812 135 aaPredicted RBP11.84□□□□□ -0.51
MSH5-212ENST00000467319 FBXL13Q8NEE6 735 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 SLC7A14Q8TBB6 771 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 SEMA4DQ92854 862 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 ELMO3Q96BJ8 720 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 ACBD6Q9BR61 282 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 MRPL45Q9BRJ2 306 aaKnown RBP11.84□□□□□ -0.51
MSH5-212ENST00000467319 FUCA2Q9BTY2 467 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 NIF3L1Q9GZT8 377 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 SDCBP2Q9H190 292 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 CRISPLD1Q9H336 500 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 THAP9Q9H5L6 903 aa11.84□□□□□ -0.51
MSH5-212ENST00000467319 APOBEC3GQ9HC16 384 aaKnown RBP11.84□□□□□ -0.51
MSH5-212ENST00000467319 ANO10Q9NW15 660 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms