RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 IRF2BPLQ9H1B7 796 aa7.73□□□□□ -1.17
SND1-205ENST00000467238 PTPRHQ9HD43 1115 aa7.73□□□□□ -1.17
SND1-205ENST00000467238 FAM86C1Q9NVL1 165 aa7.73□□□□□ -1.17
SND1-205ENST00000467238 ARHGAP28Q9P2N2 729 aa7.73□□□□□ -1.17
SND1-205ENST00000467238 TNFSF13BQ9Y275 285 aa7.73□□□□□ -1.17
SND1-205ENST00000467238 TICRRQ7Z2Z1 1910 aa7.73□□□□□ -1.17
SND1-205ENST00000467238 ACACBO00763 2458 aa7.73□□□□□ -1.17
SND1-205ENST00000467238 TSC2P49815 1807 aa7.73□□□□□ -1.17
SND1-205ENST00000467238 KIF26AQ9ULI4 1882 aaPredicted RBP7.72□□□□□ -1.17
SND1-205ENST00000467238 CCDC169A6NNP5 214 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 H0Y858 1186 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 K7ERI5 159 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 ADAM12O43184 909 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 NARSO43776 548 aaKnown RBP7.72□□□□□ -1.17
SND1-205ENST00000467238 HIP1RO75146 1068 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 B3GAT3O94766 335 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 LAMP2P13473 410 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 NPR3P17342 541 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 IGFBP6P24592 240 aaPredicted RBP7.72□□□□□ -1.17
SND1-205ENST00000467238 CLCNKBP51801 687 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 PEX3P56589 373 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 ATP2C1P98194 919 aaPredicted RBP7.72□□□□□ -1.17
SND1-205ENST00000467238 PDE4CQ08493 712 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 MAPK7Q13164 816 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 UPP1Q16831 310 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 RILPL1Q5EBL4 403 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 XKR4Q5GH76 650 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 LCE1DQ5T752 114 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 LIN9Q5TKA1 542 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 PDXDC1Q6P996 788 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 CD300LGQ6UXG3 332 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 ALKAL1Q6UXT8 129 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.72□□□□□ -1.17
SND1-205ENST00000467238 DTHD1Q6ZMT9 781 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 C1orf186Q6ZWK4 172 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 GET4Q7L5D6 327 aaPredicted RBP7.72□□□□□ -1.17
SND1-205ENST00000467238 APBB1IPQ7Z5R6 666 aaPredicted RBP7.72□□□□□ -1.17
SND1-205ENST00000467238 CEP57Q86XR8 500 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 FLCNQ8NFG4 579 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 RSAD2Q8WXG1 361 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 ATOH1Q92858 354 aaPredicted RBP7.72□□□□□ -1.17
SND1-205ENST00000467238 NXPE3Q969Y0 559 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 MRPL4Q9BYD3 311 aaKnown RBP7.72□□□□□ -1.17
SND1-205ENST00000467238 CDT1Q9H211 546 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 MFSD1Q9H3U5 465 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 C17orf75Q9HAS0 396 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 PIDD1Q9HB75 910 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.72□□□□□ -1.17
SND1-205ENST00000467238 MTRRQ9UBK8 725 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 DNM3Q9UQ16 869 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 KIF3AQ9Y496 699 aa7.72□□□□□ -1.17
SND1-205ENST00000467238 NUP210Q8TEM1 1887 aaPredicted RBP7.72□□□□□ -1.17
SND1-205ENST00000467238 EPG5Q9HCE0 2579 aa7.71□□□□□ -1.17
SND1-205ENST00000467238 OBSL1O75147 1896 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 SMIM28A0A1B0GU29 152 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 PROB1E7EW31 1015 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 ANHXE9PGG2 379 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 ABLIM1O14639 778 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 C8AP07357 584 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 POU2F2P09086 479 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 HNRNPA1P09651 372 aaKnown RBP eCLIP7.71□□□□□ -1.18
SND1-205ENST00000467238 SRFP11831 508 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 AOC1P19801 751 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 PROZP22891 400 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 GUCY2CP25092 1073 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 TKTP29401 623 aaKnown RBP7.71□□□□□ -1.18
SND1-205ENST00000467238 HOXA9P31269 272 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 CLDN10P78369 228 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 SOX4Q06945 474 aaPredicted RBP7.71□□□□□ -1.18
SND1-205ENST00000467238 HTR4Q13639 388 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 RAB33AQ14088 237 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 ZNF568Q3ZCX4 644 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 CRTC2Q53ET0 693 aaPredicted RBP7.71□□□□□ -1.18
SND1-205ENST00000467238 C4orf17Q53FE4 359 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 PPM1LQ5SGD2 360 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 HYIQ5T013 277 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 MCTP1Q6DN14 999 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 DCLRE1AQ6PJP8 1040 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 RSPO2Q6UXX9 243 aaPredicted RBP7.71□□□□□ -1.18
SND1-205ENST00000467238 SIX5Q8N196 739 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 SLC44A3Q8N4M1 653 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 C3orf58Q8NDZ4 430 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 TMX3Q96JJ7 454 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 SNX27Q96L92 541 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 DRC1Q96MC2 740 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 UROC1Q96N76 676 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 ZMAT2Q96NC0 199 aaKnown RBP7.71□□□□□ -1.18
SND1-205ENST00000467238 PNMA5Q96PV4 448 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 TIPINQ9BVW5 301 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 CCDC94Q9BW85 323 aaPredicted RBP7.71□□□□□ -1.18
SND1-205ENST00000467238 TARS2Q9BW92 718 aaKnown RBP7.71□□□□□ -1.18
SND1-205ENST00000467238 KMT5AQ9NQR1 393 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 TOPORSQ9NS56 1045 aaPredicted RBP7.71□□□□□ -1.18
SND1-205ENST00000467238 WNT16Q9UBV4 365 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 FBXL21Q9UKT6 434 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 RBM19Q9Y4C8 960 aaKnown RBP7.71□□□□□ -1.18
SND1-205ENST00000467238 CHD8Q9HCK8 2581 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 MYH10P35580 1976 aa7.71□□□□□ -1.18
SND1-205ENST00000467238 COL4A3Q01955 1670 aa7.7□□□□□ -1.18
SND1-205ENST00000467238 ANAPC1Q9H1A4 1944 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms