RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 SPATA18Q8TC71 538 aa15.5■□□□□ 0.07
DNMT3A-208ENST00000466601 PABPC5Q96DU9 382 aaKnown RBP15.5■□□□□ 0.07
DNMT3A-208ENST00000466601 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.5■□□□□ 0.07
DNMT3A-208ENST00000466601 CLDND1Q9NY35 253 aa15.5■□□□□ 0.07
DNMT3A-208ENST00000466601 SMTNL1A8MU46 457 aa15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 GABRDO14764 452 aa15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 TGM5O43548 720 aa15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 GLP2RO95838 553 aa15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 GLUD1P00367 558 aa15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 C1RP00736 705 aa15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 EPCAMP16422 314 aa15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 EEF1GP26641 437 aaKnown RBP15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 LHX1P48742 406 aa15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 ARPP19P56211 112 aa15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 NOP14P78316 857 aaKnown RBP15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 RBM10P98175 930 aaKnown RBP15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 CETN1Q12798 172 aa15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 CTC1Q2NKJ3 1217 aa15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 WDR44Q5JSH3 913 aa15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 LILRA6Q6PI73 481 aa15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 VN1R2Q8NFZ6 395 aa15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 CASP10Q92851 521 aa15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 RTP3Q9BQQ7 232 aa15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 TUBGCP2Q9BSJ2 902 aa15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 APOBEC3GQ9HC16 384 aaKnown RBP15.49■□□□□ 0.07
DNMT3A-208ENST00000466601 TACC1O75410 805 aa15.48■□□□□ 0.07
DNMT3A-208ENST00000466601 SRGAP2BP0DMP2 458 aa15.48■□□□□ 0.07
DNMT3A-208ENST00000466601 PRKCSHP14314 528 aaPredicted RBP15.48■□□□□ 0.07
DNMT3A-208ENST00000466601 WARSP23381 471 aaKnown RBP15.48■□□□□ 0.07
DNMT3A-208ENST00000466601 ROR1Q01973 937 aa15.48■□□□□ 0.07
DNMT3A-208ENST00000466601 VWA3BQ502W6 1294 aa15.48■□□□□ 0.07
DNMT3A-208ENST00000466601 TMEM184AQ6ZMB5 413 aa15.48■□□□□ 0.07
DNMT3A-208ENST00000466601 SCARA5Q6ZMJ2 495 aa15.48■□□□□ 0.07
DNMT3A-208ENST00000466601 OSTM1Q86WC4 334 aa15.48■□□□□ 0.07
DNMT3A-208ENST00000466601 DHX40Q8IX18 779 aaKnown RBP15.48■□□□□ 0.07
DNMT3A-208ENST00000466601 OR10T2Q8NGX3 314 aa15.48■□□□□ 0.07
DNMT3A-208ENST00000466601 KBTBD7Q8WVZ9 684 aa15.48■□□□□ 0.07
DNMT3A-208ENST00000466601 TMEM209Q96SK2 561 aa15.48■□□□□ 0.07
DNMT3A-208ENST00000466601 MRPL45Q9BRJ2 306 aaKnown RBP15.48■□□□□ 0.07
DNMT3A-208ENST00000466601 SNX25Q9H3E2 840 aa15.48■□□□□ 0.07
DNMT3A-208ENST00000466601 SMYD3Q9H7B4 428 aa15.48■□□□□ 0.07
DNMT3A-208ENST00000466601 DDX43Q9NXZ2 648 aaKnown RBP15.48■□□□□ 0.07
DNMT3A-208ENST00000466601 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 WDR27A2RRH5 827 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 BECN2A8MW95 431 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 CAVIN2O95810 425 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 OR4Q2P0C623 313 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 SPATA31D3P0C874 917 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 CPB1P15086 417 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 GNL1P36915 607 aaPredicted RBP15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 LTBRP36941 435 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 ASPAP45381 313 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 RAP1GAPP47736 663 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 CDH8P55286 799 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 IQCB1Q15051 598 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 SPATA31D4Q6ZUB0 917 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 EHBP1Q8NDI1 1231 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 OR6B3Q8NGW1 331 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 ZNF461Q8TAF7 563 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 TATDN2Q93075 761 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 HLA-CQ95604 372 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 FAXDC2Q96IV6 333 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 ACBD6Q9BR61 282 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 NIF3L1Q9GZT8 377 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 ZCWPW1Q9H0M4 648 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 SDCBP2Q9H190 292 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 HSD3B7Q9H2F3 369 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 NDST4Q9H3R1 872 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 UBE2ZQ9H832 354 aaPredicted RBP15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 CBX8Q9HC52 389 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 TAB2Q9NYJ8 693 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 DPP7Q9UHL4 492 aa15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 BARX2Q9UMQ3 279 aaPredicted RBP15.47■□□□□ 0.07
DNMT3A-208ENST00000466601 TSC2P49815 1807 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 HCRTO43612 131 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 TBX10O75333 385 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 ABLIM3O94929 683 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 PDGFRBP09619 1106 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 WEE2P0C1S8 567 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 ZNF18P17022 549 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 CDK11BP21127 795 aaKnown RBP15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 ACAT1P24752 427 aaKnown RBP15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 LMO2P25791 158 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 PCSK1P29120 753 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 DLX2Q07687 328 aaPredicted RBP15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 LRMPQ12912 555 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 GPR17Q13304 367 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 KRT31Q15323 416 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 MIIPQ5JXC2 388 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 TPGS2Q68CL5 300 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 ANKRD54Q6NXT1 300 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 ELMSAN1Q6PJG2 1045 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 LRSAM1Q6UWE0 723 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 RNF19BQ6ZMZ0 732 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 DCP1BQ8IZD4 617 aaKnown RBP15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 KREMEN2Q8NCW0 462 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 ANKRD20A12PQ8NF67 263 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 LMO3Q8TAP4 145 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 HDAC7Q8WUI4 952 aa15.46■□□□□ 0.07
DNMT3A-208ENST00000466601 BCO2Q9BYV7 579 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms