RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 TXLNBQ8N3L3 684 aa14.91□□□□□ -0.02
HDAC6-215ENST00000465457 KIF18AQ8NI77 898 aa14.91□□□□□ -0.02
HDAC6-215ENST00000465457 SLC7A3Q8WY07 619 aa14.91□□□□□ -0.02
HDAC6-215ENST00000465457 B3GALT6Q96L58 329 aa14.91□□□□□ -0.02
HDAC6-215ENST00000465457 SH2D3AQ9BRG2 576 aa14.91□□□□□ -0.02
HDAC6-215ENST00000465457 EPC1Q9H2F5 836 aa14.91□□□□□ -0.02
HDAC6-215ENST00000465457 MMRN2Q9H8L6 949 aa14.91□□□□□ -0.02
HDAC6-215ENST00000465457 PLCB1Q9NQ66 1216 aa14.91□□□□□ -0.02
HDAC6-215ENST00000465457 MRPL17Q9NRX2 175 aaKnown RBP14.91□□□□□ -0.02
HDAC6-215ENST00000465457 FAM105AQ9NUU6 356 aa14.91□□□□□ -0.02
HDAC6-215ENST00000465457 TRMT1Q9NXH9 659 aaKnown RBP14.91□□□□□ -0.02
HDAC6-215ENST00000465457 PIN4Q9Y237 131 aaKnown RBP14.91□□□□□ -0.02
HDAC6-215ENST00000465457 PRG3Q9Y2Y8 225 aaPredicted RBP14.91□□□□□ -0.02
HDAC6-215ENST00000465457 ASPMQ8IZT6 3477 aa14.91□□□□□ -0.02
HDAC6-215ENST00000465457 MYH11P35749 1972 aa14.91□□□□□ -0.02
HDAC6-215ENST00000465457 A0A087WZ62 844 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 USP27XA6NNY8 438 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 MAGEB2O15479 319 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 GLUD1P00367 558 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 NPEPPSP55786 919 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 KRT83P78385 493 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 LMNB2Q03252 620 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 KCNH2Q12809 1159 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 EMC2Q15006 297 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 LPAL2Q16609 132 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 ZNF528Q3MIS6 628 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 AGMOQ6ZNB7 445 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 INTS8Q75QN2 995 aaKnown RBP14.9□□□□□ -0.02
HDAC6-215ENST00000465457 CACNA2D4Q7Z3S7 1137 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 USP37Q86T82 979 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 MAP4K3Q8IVH8 894 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 GLYCTKQ8IVS8 523 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 ZBTB44Q8NCP5 570 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 RPS6KC1Q96S38 1066 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 JPH2Q9BR39 696 aaPredicted RBP14.9□□□□□ -0.02
HDAC6-215ENST00000465457 FDXACB1Q9BRP7 624 aaPredicted RBP14.9□□□□□ -0.02
HDAC6-215ENST00000465457 RTKNQ9BST9 563 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 KMT5AQ9NQR1 393 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 FBXL5Q9UKA1 691 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 MYO6Q9UM54 1294 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 R3HCC1Q9Y3T6 440 aaKnown RBP14.9□□□□□ -0.02
HDAC6-215ENST00000465457 ADGRG1Q9Y653 693 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.9□□□□□ -0.02
HDAC6-215ENST00000465457 SPEGQ15772 3267 aa14.9□□□□□ -0.02
HDAC6-215ENST00000465457 KANSL1LA0AUZ9 987 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 SOWAHDA6NJG2 315 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 NRP1O14786 923 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 KIAA0391O15091 583 aaKnown RBP14.89□□□□□ -0.03
HDAC6-215ENST00000465457 LAMTOR5O43504 91 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 EXOC3O60645 756 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 LILRB5O75023 590 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 POMCP01189 267 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 SOD2P04179 222 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 URODP06132 367 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 KRT13P13646 458 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 HOXB3P14651 431 aaPredicted RBP14.89□□□□□ -0.03
HDAC6-215ENST00000465457 TMOD1P28289 359 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 NPTX2P47972 431 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 PEX3P56589 373 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 ETF1P62495 437 aaKnown RBP14.89□□□□□ -0.03
HDAC6-215ENST00000465457 NTHL1P78549 312 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 COL9A2Q14055 689 aaPredicted RBP14.89□□□□□ -0.03
HDAC6-215ENST00000465457 UBXN2BQ14CS0 331 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 PPM1JQ5JR12 505 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 RAD9BQ6WBX8 426 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 GBP6Q6ZN66 633 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 TOGARAM2Q6ZUX3 1019 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 KSR1Q8IVT5 923 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 TMEM161BQ8NDZ6 487 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 SLC35C1Q96A29 364 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 DDX23Q9BUQ8 820 aaKnown RBP14.89□□□□□ -0.03
HDAC6-215ENST00000465457 HERC2P3Q9BVR0 1158 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 TRAIPQ9BWF2 469 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 FAM207AQ9NSI2 230 aaPredicted RBP14.89□□□□□ -0.03
HDAC6-215ENST00000465457 FBXO4Q9UKT5 387 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 TBX20Q9UMR3 447 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 PCDHGA2Q9Y5H1 932 aa14.89□□□□□ -0.03
HDAC6-215ENST00000465457 FASNP49327 2511 aaKnown RBP14.89□□□□□ -0.03
HDAC6-215ENST00000465457 ZZEF1O43149 2961 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 F5P12259 2224 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 CCDC169A6NNP5 214 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 P4HA2O15460 535 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 EFEMP2O95967 443 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 ADH1AP07327 375 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 NAMPTP43490 491 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 KCNA1Q09470 495 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 SPEM2Q0P670 501 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 MLF2Q15773 248 aaPredicted RBP14.88□□□□□ -0.03
HDAC6-215ENST00000465457 MTERF2Q49AM1 385 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 DCAF17Q5H9S7 520 aaPredicted RBP14.88□□□□□ -0.03
HDAC6-215ENST00000465457 MAEAQ7L5Y9 396 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 PALB2Q86YC2 1186 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 REXO1L1PQ8IX06 675 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 RNF168Q8IYW5 571 aaPredicted RBP14.88□□□□□ -0.03
HDAC6-215ENST00000465457 XXYLT1Q8NBI6 393 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 NELL1Q92832 810 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 NXPE3Q969Y0 559 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 BORCS6Q96GS4 357 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 CEP89Q96ST8 783 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 LSM14BQ9BX40 385 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms