RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 GAP43P17677 238 aa22.54■■□□□ 1.2
CSPG5-204ENST00000465441 TUFMP49411 452 aaKnown RBP22.54■■□□□ 1.2
CSPG5-204ENST00000465441 SLC39A14Q15043 492 aa22.54■■□□□ 1.2
CSPG5-204ENST00000465441 STXBP5Q5T5C0 1151 aa22.54■■□□□ 1.2
CSPG5-204ENST00000465441 L1TD1Q5T7N2 865 aaKnown RBP22.54■■□□□ 1.2
CSPG5-204ENST00000465441 WSCD1Q658N2 575 aa22.54■■□□□ 1.2
CSPG5-204ENST00000465441 LRRTM3Q86VH5 581 aa22.54■■□□□ 1.2
CSPG5-204ENST00000465441 ARID3BQ8IVW6 561 aaPredicted RBP22.54■■□□□ 1.2
CSPG5-204ENST00000465441 THEM5Q8N1Q8 247 aa22.54■■□□□ 1.2
CSPG5-204ENST00000465441 ZSWIM2Q8NEG5 633 aa22.54■■□□□ 1.2
CSPG5-204ENST00000465441 FAM3CQ92520 227 aa22.54■■□□□ 1.2
CSPG5-204ENST00000465441 ACCSQ96QU6 501 aa22.54■■□□□ 1.2
CSPG5-204ENST00000465441 MKNK1Q9BUB5 465 aa22.54■■□□□ 1.2
CSPG5-204ENST00000465441 ATXN3LQ9H3M9 355 aa22.54■■□□□ 1.2
CSPG5-204ENST00000465441 FOXD4L1Q9NU39 408 aa22.54■■□□□ 1.2
CSPG5-204ENST00000465441 EXOC7Q9UPT5 735 aa22.54■■□□□ 1.2
CSPG5-204ENST00000465441 MTMR6Q9Y217 621 aa22.54■■□□□ 1.2
CSPG5-204ENST00000465441 TULP1O00294 542 aaPredicted RBP22.53■■□□□ 1.2
CSPG5-204ENST00000465441 KINO60870 393 aaKnown RBP22.53■■□□□ 1.2
CSPG5-204ENST00000465441 IL18RAPO95256 599 aa22.53■■□□□ 1.2
CSPG5-204ENST00000465441 GCNT3O95395 438 aa22.53■■□□□ 1.2
CSPG5-204ENST00000465441 GABRR2P28476 465 aa22.53■■□□□ 1.2
CSPG5-204ENST00000465441 ID4P47928 161 aa22.53■■□□□ 1.2
CSPG5-204ENST00000465441 WNT7BP56706 349 aa22.53■■□□□ 1.2
CSPG5-204ENST00000465441 MGAT5BQ3V5L5 792 aa22.53■■□□□ 1.2
CSPG5-204ENST00000465441 TSSK4Q6SA08 328 aa22.53■■□□□ 1.2
CSPG5-204ENST00000465441 CCDC73Q6ZRK6 1079 aa22.53■■□□□ 1.2
CSPG5-204ENST00000465441 ITIH5Q86UX2 942 aa22.53■■□□□ 1.2
CSPG5-204ENST00000465441 NT5DC4Q86YG4 428 aa22.53■■□□□ 1.2
CSPG5-204ENST00000465441 SUMF1Q8NBK3 374 aa22.53■■□□□ 1.2
CSPG5-204ENST00000465441 INTS4Q96HW7 963 aaKnown RBP22.53■■□□□ 1.2
CSPG5-204ENST00000465441 SEPT5Q99719 369 aaPredicted RBP22.53■■□□□ 1.2
CSPG5-204ENST00000465441 LPIN3Q9BQK8 851 aa22.53■■□□□ 1.2
CSPG5-204ENST00000465441 FAM213AQ9BRX8 229 aa22.53■■□□□ 1.2
CSPG5-204ENST00000465441 LMAN1LQ9HAT1 526 aa22.53■■□□□ 1.2
CSPG5-204ENST00000465441 PCDHB13Q9Y5F0 798 aa22.53■■□□□ 1.2
CSPG5-204ENST00000465441 PIAS3Q9Y6X2 628 aa22.53■■□□□ 1.2
CSPG5-204ENST00000465441 A0A087X0B3 334 aa22.52■■□□□ 1.2
CSPG5-204ENST00000465441 KPNA7A9QM74 516 aa22.52■■□□□ 1.2
CSPG5-204ENST00000465441 ARNTLO00327 626 aa22.52■■□□□ 1.2
CSPG5-204ENST00000465441 IDEP14735 1019 aa22.52■■□□□ 1.2
CSPG5-204ENST00000465441 CASP5P51878 434 aa22.52■■□□□ 1.2
CSPG5-204ENST00000465441 MTAPQ13126 283 aa22.52■■□□□ 1.2
CSPG5-204ENST00000465441 YAF2Q8IY57 180 aa22.52■■□□□ 1.2
CSPG5-204ENST00000465441 DCLK2Q8N568 766 aa22.52■■□□□ 1.2
CSPG5-204ENST00000465441 FAM200AQ8TCP9 573 aa22.52■■□□□ 1.2
CSPG5-204ENST00000465441 SAAL1Q96ER3 474 aa22.52■■□□□ 1.2
CSPG5-204ENST00000465441 LRRC3BQ96PB8 259 aa22.52■■□□□ 1.2
CSPG5-204ENST00000465441 MORC2Q9Y6X9 1032 aaPredicted RBP22.52■■□□□ 1.2
CSPG5-204ENST00000465441 CHADO15335 359 aa22.51■■□□□ 1.19
CSPG5-204ENST00000465441 LDHAP00338 332 aaKnown RBP22.51■■□□□ 1.19
CSPG5-204ENST00000465441 CCNE1P24864 410 aa22.51■■□□□ 1.19
CSPG5-204ENST00000465441 STAT6P42226 847 aa22.51■■□□□ 1.19
CSPG5-204ENST00000465441 GPR158Q5T848 1215 aa22.51■■□□□ 1.19
CSPG5-204ENST00000465441 KIAA2013Q8IYS2 634 aa22.51■■□□□ 1.19
CSPG5-204ENST00000465441 ZBTB44Q8NCP5 570 aa22.51■■□□□ 1.19
CSPG5-204ENST00000465441 CSGALNACT1Q8TDX6 532 aa22.51■■□□□ 1.19
CSPG5-204ENST00000465441 GIPC2Q8TF65 315 aa22.51■■□□□ 1.19
CSPG5-204ENST00000465441 ATRIPQ8WXE1 791 aa22.51■■□□□ 1.19
CSPG5-204ENST00000465441 RUBCNQ92622 972 aa22.51■■□□□ 1.19
CSPG5-204ENST00000465441 NELL1Q92832 810 aa22.51■■□□□ 1.19
CSPG5-204ENST00000465441 FGFBP2Q9BYJ0 223 aa22.51■■□□□ 1.19
CSPG5-204ENST00000465441 ZSCAN16Q9H4T2 348 aaPredicted RBP22.51■■□□□ 1.19
CSPG5-204ENST00000465441 OLFML3Q9NRN5 406 aa22.51■■□□□ 1.19
CSPG5-204ENST00000465441 ZSCAN32Q9NX65 697 aa22.51■■□□□ 1.19
CSPG5-204ENST00000465441 PCDHGA2Q9Y5H1 932 aa22.51■■□□□ 1.19
CSPG5-204ENST00000465441 PATJQ8NI35 1801 aa22.5■■□□□ 1.19
CSPG5-204ENST00000465441 FRMD3A2A2Y4 597 aa22.5■■□□□ 1.19
CSPG5-204ENST00000465441 FGF19O95750 216 aa22.5■■□□□ 1.19
CSPG5-204ENST00000465441 ATF6P18850 670 aa22.5■■□□□ 1.19
CSPG5-204ENST00000465441 GARTP22102 1010 aa22.5■■□□□ 1.19
CSPG5-204ENST00000465441 MLLT6P55198 1093 aaPredicted RBP22.5■■□□□ 1.19
CSPG5-204ENST00000465441 TFAMQ00059 246 aaKnown RBP22.5■■□□□ 1.19
CSPG5-204ENST00000465441 FCHO2Q0JRZ9 810 aa22.5■■□□□ 1.19
CSPG5-204ENST00000465441 SV2CQ496J9 727 aa22.5■■□□□ 1.19
CSPG5-204ENST00000465441 SCARA3Q6AZY7 606 aa22.5■■□□□ 1.19
CSPG5-204ENST00000465441 BRSK2Q8IWQ3 736 aa22.5■■□□□ 1.19
CSPG5-204ENST00000465441 SYCP3Q8IZU3 236 aa22.5■■□□□ 1.19
CSPG5-204ENST00000465441 SPPL2BQ8TCT7 592 aa22.5■■□□□ 1.19
CSPG5-204ENST00000465441 C2orf15Q8WU43 125 aaKnown RBP22.5■■□□□ 1.19
CSPG5-204ENST00000465441 HINFPQ9BQA5 517 aa22.5■■□□□ 1.19
CSPG5-204ENST00000465441 CHRDQ9H2X0 955 aa22.5■■□□□ 1.19
CSPG5-204ENST00000465441 IL21Q9HBE4 155 aa22.5■■□□□ 1.19
CSPG5-204ENST00000465441 PANK4Q9NVE7 773 aa22.5■■□□□ 1.19
CSPG5-204ENST00000465441 AGAP1Q9UPQ3 857 aa22.5■■□□□ 1.19
CSPG5-204ENST00000465441 F5P12259 2224 aa22.49■■□□□ 1.19
CSPG5-204ENST00000465441 GOLGA8IPA6NC78 632 aa22.49■■□□□ 1.19
CSPG5-204ENST00000465441 GOLGA8JA6NMD2 632 aa22.49■■□□□ 1.19
CSPG5-204ENST00000465441 DPYSL4O14531 572 aa22.49■■□□□ 1.19
CSPG5-204ENST00000465441 PRPF6O94906 941 aaKnown RBP22.49■■□□□ 1.19
CSPG5-204ENST00000465441 HAPLN1P10915 354 aaPredicted RBP22.49■■□□□ 1.19
CSPG5-204ENST00000465441 CHRNB1P11230 501 aa22.49■■□□□ 1.19
CSPG5-204ENST00000465441 CYP4F8P98187 520 aa22.49■■□□□ 1.19
CSPG5-204ENST00000465441 SMARCB1Q12824 385 aa22.49■■□□□ 1.19
CSPG5-204ENST00000465441 VEPH1Q14D04 833 aa22.49■■□□□ 1.19
CSPG5-204ENST00000465441 ARHGAP15Q53QZ3 475 aa22.49■■□□□ 1.19
CSPG5-204ENST00000465441 MAMSTRQ6ZN01 415 aa22.49■■□□□ 1.19
CSPG5-204ENST00000465441 DCP1BQ8IZD4 617 aaKnown RBP22.49■■□□□ 1.19
CSPG5-204ENST00000465441 PDILTQ8N807 584 aa22.49■■□□□ 1.19
CSPG5-204ENST00000465441 PCIF1Q9H4Z3 704 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms