RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	FOXS1	O43638	330 aa		6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	GOLGA6D	P0CG33	693 aa		6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	ZEB1	P37275	1124 aa	Predicted RBP	6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	GZMK	P49863	264 aa		6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	TARDBP	Q13148	414 aa	Known RBP eCLIP	6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	MRPL49	Q13405	166 aa	Known RBP	6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	PGS1	Q32NB8	556 aa		6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	ANKS6	Q68DC2	871 aa		6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	B3GNT9	Q6UX72	402 aa		6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	CAMKK1	Q8N5S9	505 aa		6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	IL17RA	Q96F46	866 aa		6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	TMX3	Q96JJ7	454 aa		6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	AIFM3	Q96NN9	605 aa		6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	DMRTA2	Q96SC8	542 aa		6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	ACO2	Q99798	780 aa	Known RBP	6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	VRK1	Q99986	396 aa	Predicted RBP	6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	NELFA	Q9H3P2	528 aa		6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	MANSC1	Q9H8J5	431 aa		6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	GOLGA6A	Q9NYA3	693 aa		6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	PLA2G3	Q9NZ20	509 aa		6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	ZFR2	Q9UPR6	939 aa	Known RBP	6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	RUVBL1	Q9Y265	456 aa	Known RBP	6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	EIF3A	Q14152	1382 aa	Known RBP	6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	FAM208A	Q9UK61	1670 aa	Known RBP	6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	TCF20	Q9UGU0	1960 aa	Known RBP	6.25	□□□□□ -1.41
CACNA1C-223	ENST00000465278	ANKRD31	Q8N7Z5	1873 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	PMS2P1	A4D2B8	440 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	NRP1	O14786	923 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	ALDH2	P05091	517 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	DDC	P20711	480 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	PCSK1	P29120	753 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	MSX2	P35548	267 aa	Predicted RBP	6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	ZNF280A	P59817	542 aa	Predicted RBP	6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	FOXL1	Q12952	345 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	DUSP8	Q13202	625 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	GFOD2	Q3B7J2	385 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	KHDC1	Q4VXA5	237 aa	Known RBP	6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	HSP90AB2P	Q58FF8	381 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	FKBP15	Q5T1M5	1219 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	PPP4R3A	Q6IN85	833 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	PDZD4	Q76G19	769 aa	Predicted RBP	6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	KRTAP19-1	Q8IUB9	90 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	ELOA2	Q8IYF1	753 aa	Predicted RBP	6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	FUK	Q8N0W3	1084 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	NGDN	Q8NEJ9	315 aa	Known RBP	6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	PPP1R35	Q8TAP8	253 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	DIS3L	Q8TF46	1054 aa	Known RBP	6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	C20orf173	Q96LM9	149 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	ZNF512	Q96ME7	567 aa	Predicted RBP	6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	MYOC	Q99972	504 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	LANCL2	Q9NS86	450 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	BCCIP	Q9P287	314 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	STK26	Q9P289	416 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	DDX20	Q9UHI6	824 aa	Known RBP	6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	SH3BP1	Q9Y3L3	701 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	PCDHA3	Q9Y5H8	950 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	CHD6	Q8TD26	2715 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	DAPK1	P53355	1430 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	RNF123	Q5XPI4	1314 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	CLSPN	Q9HAW4	1339 aa		6.24	□□□□□ -1.41
CACNA1C-223	ENST00000465278	ANKRD30A	Q9BXX3	1397 aa		6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278		A0A0G2JLL6	359 aa	Predicted RBP	6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	CELF2	O95319	508 aa	Known RBP	6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	U2AF1L5	P0DN76	240 aa	Predicted RBP	6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	RAP2A	P10114	183 aa		6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	RPS19	P39019	145 aa	Known RBP	6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	U2AF1	Q01081	240 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	LLGL1	Q15334	1064 aa		6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	CCDC157	Q569K6	752 aa		6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	AFMID	Q63HM1	303 aa		6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	FAM109B	Q6ICB4	259 aa	Predicted RBP	6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	SPOCD1	Q6ZMY3	1216 aa		6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	TTC7B	Q86TV6	843 aa		6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	CIR1	Q86X95	450 aa	Predicted RBP	6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	SLC35B2	Q8TB61	432 aa		6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	C1GALT1C1	Q96EU7	318 aa		6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	CYFIP2	Q96F07	1278 aa		6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	TEPSIN	Q96N21	525 aa		6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	TAAR9	Q96RI9	348 aa		6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	TMEM140	Q9NV12	185 aa		6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	LAMB1	P07942	1786 aa		6.23	□□□□□ -1.41
CACNA1C-223	ENST00000465278	COL2A1	P02458	1487 aa	Predicted RBP	6.22	□□□□□ -1.41
CACNA1C-223	ENST00000465278	POLR3A	O14802	1390 aa	Predicted RBP	6.22	□□□□□ -1.41
CACNA1C-223	ENST00000465278	ATRNL1	Q5VV63	1379 aa		6.22	□□□□□ -1.41
CACNA1C-223	ENST00000465278	DTNB	O60941	627 aa		6.22	□□□□□ -1.41
CACNA1C-223	ENST00000465278	FTL	P02792	175 aa	Predicted RBP	6.22	□□□□□ -1.41
CACNA1C-223	ENST00000465278	RPLP2	P05387	115 aa	Known RBP	6.22	□□□□□ -1.41
CACNA1C-223	ENST00000465278	IL2RB	P14784	551 aa		6.22	□□□□□ -1.41
CACNA1C-223	ENST00000465278	GUCY1A2	P33402	732 aa		6.22	□□□□□ -1.41
CACNA1C-223	ENST00000465278	CDC42EP1	Q00587	391 aa		6.22	□□□□□ -1.41
CACNA1C-223	ENST00000465278	NHLH1	Q02575	133 aa		6.22	□□□□□ -1.41
CACNA1C-223	ENST00000465278	FZD5	Q13467	585 aa		6.22	□□□□□ -1.41
CACNA1C-223	ENST00000465278	GLIPR1L2	Q4G1C9	344 aa		6.22	□□□□□ -1.41
CACNA1C-223	ENST00000465278	FAM47A	Q5JRC9	791 aa		6.22	□□□□□ -1.41
CACNA1C-223	ENST00000465278	NOL8	Q76FK4	1167 aa	Known RBP	6.22	□□□□□ -1.41
CACNA1C-223	ENST00000465278	ZNF572	Q7Z3I7	529 aa	Predicted RBP	6.22	□□□□□ -1.41
CACNA1C-223	ENST00000465278	D2HGDH	Q8N465	521 aa		6.22	□□□□□ -1.41
CACNA1C-223	ENST00000465278	SH2D3C	Q8N5H7	860 aa		6.22	□□□□□ -1.41
CACNA1C-223	ENST00000465278	ZBTB34	Q8NCN2	500 aa		6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms