RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 PLEKHM1Q9Y4G2 1056 aa7.47□□□□□ -1.21
PTCD3-205ENST00000464541 PAXBP1Q9Y5B6 917 aa7.47□□□□□ -1.21
PTCD3-205ENST00000464541 TRGV11A0A075B6L2 103 aa7.46□□□□□ -1.22
PTCD3-205ENST00000464541 TOR1BO14657 336 aa7.46□□□□□ -1.22
PTCD3-205ENST00000464541 KIF3BO15066 747 aa7.46□□□□□ -1.22
PTCD3-205ENST00000464541 PIM1P11309 404 aaPredicted RBP7.46□□□□□ -1.22
PTCD3-205ENST00000464541 HDCP19113 662 aa7.46□□□□□ -1.22
PTCD3-205ENST00000464541 FDXRP22570 491 aa7.46□□□□□ -1.22
PTCD3-205ENST00000464541 KCNJ5P48544 419 aa7.46□□□□□ -1.22
PTCD3-205ENST00000464541 USP14P54578 494 aa7.46□□□□□ -1.22
PTCD3-205ENST00000464541 FPGSQ05932 587 aa7.46□□□□□ -1.22
PTCD3-205ENST00000464541 GEN1Q17RS7 908 aa7.46□□□□□ -1.22
PTCD3-205ENST00000464541 MICALCLQ6ZW33 695 aa7.46□□□□□ -1.22
PTCD3-205ENST00000464541 GPR149Q86SP6 731 aa7.46□□□□□ -1.22
PTCD3-205ENST00000464541 LNX2Q8N448 690 aa7.46□□□□□ -1.22
PTCD3-205ENST00000464541 ASB10Q8WXI3 467 aa7.46□□□□□ -1.22
PTCD3-205ENST00000464541 TMPRSS5Q9H3S3 457 aa7.46□□□□□ -1.22
PTCD3-205ENST00000464541 CYP4F11Q9HBI6 524 aa7.46□□□□□ -1.22
PTCD3-205ENST00000464541 GEMIN8Q9NWZ8 242 aaKnown RBP7.46□□□□□ -1.22
PTCD3-205ENST00000464541 VSX1Q9NZR4 365 aaPredicted RBP7.46□□□□□ -1.22
PTCD3-205ENST00000464541 ZFPL1O95159 310 aa7.45□□□□□ -1.22
PTCD3-205ENST00000464541 HKR1P10072 659 aa7.45□□□□□ -1.22
PTCD3-205ENST00000464541 MYBP10242 640 aa7.45□□□□□ -1.22
PTCD3-205ENST00000464541 ARFIP2P53365 341 aa7.45□□□□□ -1.22
PTCD3-205ENST00000464541 DPTQ07507 201 aa7.45□□□□□ -1.22
PTCD3-205ENST00000464541 FHL2Q14192 279 aa7.45□□□□□ -1.22
PTCD3-205ENST00000464541 HLTFQ14527 1009 aaKnown RBP eCLIP7.45□□□□□ -1.22
PTCD3-205ENST00000464541 GRM3Q14832 879 aa7.45□□□□□ -1.22
PTCD3-205ENST00000464541 AMOTQ4VCS5 1084 aa7.45□□□□□ -1.22
PTCD3-205ENST00000464541 Q6ZPA2 131 aa7.45□□□□□ -1.22
PTCD3-205ENST00000464541 ZNF627Q7L945 461 aa7.45□□□□□ -1.22
PTCD3-205ENST00000464541 DGKHQ86XP1 1220 aa7.45□□□□□ -1.22
PTCD3-205ENST00000464541 SNX19Q92543 992 aa7.45□□□□□ -1.22
PTCD3-205ENST00000464541 SUCLG2Q96I99 432 aa7.45□□□□□ -1.22
PTCD3-205ENST00000464541 MOGAT1Q96PD6 335 aa7.45□□□□□ -1.22
PTCD3-205ENST00000464541 HEPHQ9BQS7 1158 aa7.45□□□□□ -1.22
PTCD3-205ENST00000464541 SCAND2PQ9GZW5 306 aaPredicted RBP7.45□□□□□ -1.22
PTCD3-205ENST00000464541 ZMAT3Q9HA38 289 aaKnown RBP7.45□□□□□ -1.22
PTCD3-205ENST00000464541 SYBUQ9NX95 663 aa7.45□□□□□ -1.22
PTCD3-205ENST00000464541 TESQ9UGI8 421 aaKnown RBP7.45□□□□□ -1.22
PTCD3-205ENST00000464541 AGAP1Q9UPQ3 857 aa7.45□□□□□ -1.22
PTCD3-205ENST00000464541 DMTF1Q9Y222 760 aa7.45□□□□□ -1.22
PTCD3-205ENST00000464541 FRMPD2Q68DX3 1309 aaPredicted RBP7.45□□□□□ -1.22
PTCD3-205ENST00000464541 GRID2IPA4D2P6 1211 aa7.44□□□□□ -1.22
PTCD3-205ENST00000464541 M0QYG6 137 aa7.44□□□□□ -1.22
PTCD3-205ENST00000464541 AKAP8O43823 692 aaKnown RBP7.44□□□□□ -1.22
PTCD3-205ENST00000464541 SRGNP10124 158 aa7.44□□□□□ -1.22
PTCD3-205ENST00000464541 ITGAMP11215 1152 aa7.44□□□□□ -1.22
PTCD3-205ENST00000464541 NPR1P16066 1061 aa7.44□□□□□ -1.22
PTCD3-205ENST00000464541 INHBCP55103 352 aa7.44□□□□□ -1.22
PTCD3-205ENST00000464541 FAM193AP78312 1265 aa7.44□□□□□ -1.22
PTCD3-205ENST00000464541 CNN3Q15417 329 aaKnown RBP7.44□□□□□ -1.22
PTCD3-205ENST00000464541 PREPLQ4J6C6 727 aaPredicted RBP7.44□□□□□ -1.22
PTCD3-205ENST00000464541 Q6YL49 198 aa7.44□□□□□ -1.22
PTCD3-205ENST00000464541 ADGRG5Q8IZF4 528 aa7.44□□□□□ -1.22
PTCD3-205ENST00000464541 LINC00476Q8WZB0 136 aa7.44□□□□□ -1.22
PTCD3-205ENST00000464541 ANKS1AQ92625 1134 aa7.44□□□□□ -1.22
PTCD3-205ENST00000464541 TMEM125Q96AQ2 219 aa7.44□□□□□ -1.22
PTCD3-205ENST00000464541 LRIG1Q96JA1 1093 aa7.44□□□□□ -1.22
PTCD3-205ENST00000464541 TRIM54Q9BYV2 358 aa7.44□□□□□ -1.22
PTCD3-205ENST00000464541 DPH1Q9BZG8 443 aa7.44□□□□□ -1.22
PTCD3-205ENST00000464541 ATP6V0A4Q9HBG4 840 aa7.44□□□□□ -1.22
PTCD3-205ENST00000464541 STAP2Q9UGK3 403 aa7.44□□□□□ -1.22
PTCD3-205ENST00000464541 DDX20Q9UHI6 824 aaKnown RBP7.44□□□□□ -1.22
PTCD3-205ENST00000464541 A6NNZ2 444 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 ISM1B1AKI9 464 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 TPP1O14773 563 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 FOXN1O15353 648 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 DNAJB5O75953 348 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 RHOBTB3O94955 611 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 KIF20AO95235 890 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 EN2P19622 333 aaPredicted RBP7.43□□□□□ -1.22
PTCD3-205ENST00000464541 KLF10Q13118 480 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 HSP90AB2PQ58FF8 381 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 LAIR1Q6GTX8 287 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 DARS2Q6PI48 645 aaKnown RBP7.43□□□□□ -1.22
PTCD3-205ENST00000464541 MRGPRGQ86SM5 289 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 LDLRAD3Q86YD5 345 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 PSD4Q8NDX1 1056 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 NSUN7Q8NE18 718 aaKnown RBP7.43□□□□□ -1.22
PTCD3-205ENST00000464541 SUPT20HQ8NEM7 779 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 IL31RAQ8NI17 732 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 SLC9A6Q92581 669 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 TTC17Q96AE7 1141 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 PTCD3Q96EY7 689 aaKnown RBP7.43□□□□□ -1.22
PTCD3-205ENST00000464541 CCDC136Q96JN2 1154 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 NT5C1BQ96P26 610 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 SORCS2Q96PQ0 1159 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 OSBPL9Q96SU4 736 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 C22orf23Q9BZE7 217 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 TOR3AQ9H497 397 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 MAST3O60307 1309 aa7.43□□□□□ -1.22
PTCD3-205ENST00000464541 COL4A3Q01955 1670 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 MYO1FO00160 1098 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 GOLIM4O00461 696 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 UNC5CO95185 931 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 GRPP07492 148 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 KRT4P19013 534 aa7.42□□□□□ -1.22
PTCD3-205ENST00000464541 ITGALP20701 1170 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms