RNA–Protein interactions for RNA: ENST00000463837.5

CCDC88B-204, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 5,235 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-204ENST00000463837 HEY2Q9UBP5 337 aa19.87■□□□□ 0.77
CCDC88B-204ENST00000463837 PIK3C2BO00750 1634 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 TMEM247A6NEH6 219 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 ARHGEF9O43307 516 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 ZC3H11AO75152 810 aaKnown RBP eCLIP19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 CAMTA2O94983 1202 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 MYBPC2Q14324 1141 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 ILDR1Q86SU0 546 aaPredicted RBP19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 DDIASQ8IXT1 998 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 RDM1Q8NG50 284 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 HIC2Q96JB3 615 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 EPAS1Q99814 870 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 HAO1Q9UJM8 370 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 IGSF9BQ9UPX0 1349 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 APOA4P06727 396 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 RBP3P10745 1247 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 ATXN3P54252 364 aaPredicted RBP19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 LRRC8BQ6P9F7 803 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 HHIPL2Q6UWX4 724 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 ZNF555Q8NEP9 628 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 ATP8B4Q8TF62 1192 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 TMA16Q96EY4 203 aaKnown RBP19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 UNC45AQ9H3U1 944 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 OLA1Q9NTK5 396 aaKnown RBP19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 C3orf70A6NLC5 250 aaPredicted RBP19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 SLC37A4O43826 429 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 ATP9BO43861 1147 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 KDM1AO60341 852 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 UBOX5O94941 541 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 MXD4Q14582 209 aaPredicted RBP19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 PACS2Q86VP3 889 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 CD302Q8IX05 232 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 PARD3BQ8TEW8 1205 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 ULK4Q96C45 1275 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 DACH2Q96NX9 599 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 TM9SF1O15321 606 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 H2AFYO75367 372 aaKnown RBP19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 POLBP06746 335 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 SPP2Q13103 211 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 ZNF668Q96K58 619 aaPredicted RBP19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 SH2D3AQ9BRG2 576 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 SEPT3Q9UH03 358 aa19.86■□□□□ 0.77
CCDC88B-204ENST00000463837 KIF20BQ96Q89 1820 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 UBE2Q2LH0YL09 131 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 IFNA8P32881 189 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 WDR72Q3MJ13 1102 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 ZNF571Q7Z3V5 609 aaPredicted RBP19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 GALNT4Q8N4A0 578 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 CCT7Q99832 543 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 MXRA8Q9BRK3 442 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 RFC5P40937 340 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 CD163L1Q9NR16 1453 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 AKAP10O43572 662 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 PSMD7P51665 324 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 ZCWPW2Q504Y3 356 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 ZNF662Q6ZS27 426 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 FASTKD5Q7L8L6 764 aaKnown RBP19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 TMC3Q7Z5M5 1100 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 ENTPD3O75355 529 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 IL18RAPO95256 599 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 NTSR2O95665 410 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 RBP5P82980 135 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 MCL1Q07820 350 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 XRRA1Q6P2D8 792 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 ASAP3Q8TDY4 903 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 HACD3Q9P035 362 aa19.85■□□□□ 0.77
CCDC88B-204ENST00000463837 FOXN3O00409 490 aaPredicted RBP19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 FKBP6O75344 327 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 HADHAP40939 763 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 HSD17B4P51659 736 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 TSPY1Q01534 308 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 ARID3BQ8IVW6 561 aaPredicted RBP19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 PGM2Q96G03 612 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 ASCC2Q9H1I8 757 aaPredicted RBP19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 DTNAQ9Y4J8 743 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 GPR75-ASB3A0A0A6YYF3 556 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 MAFGO15525 162 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 ADORA2BP29275 332 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 MAP3K10Q02779 954 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 LAMB3Q13751 1172 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 CCNJLQ8IV13 435 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 LPAR1Q92633 364 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 NIF3L1Q9GZT8 377 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 ZNF229Q9UJW7 825 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 SLC13A4Q9UKG4 626 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 JCADQ9P266 1359 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 TRIM49D1C9J1S8 452 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 CDH2P19022 906 aaPredicted RBP19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 BTKQ06187 659 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 ZNF844Q08AG5 666 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 FLOT2Q14254 428 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 MFSD14CQ5VZR4 134 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 MTMR8Q96EF0 704 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 CRAMP1Q96RY5 1269 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 PRR12Q9ULL5 1215 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 DEPDC5O75140 1603 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 AIM2O14862 343 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 MYCP01106 439 aaPredicted RBP19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 ACOT2P49753 483 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 TPI1P60174 286 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms