RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 SYCE3A1L190 88 aa21.21■□□□□ 0.99
COL9A3-204ENST00000463487 PMM2O15305 246 aa21.21■□□□□ 0.99
COL9A3-204ENST00000463487 TBC1D4O60343 1298 aa21.21■□□□□ 0.99
COL9A3-204ENST00000463487 GLP2RO95838 553 aa21.21■□□□□ 0.99
COL9A3-204ENST00000463487 ASS1P00966 412 aaKnown RBP21.21■□□□□ 0.99
COL9A3-204ENST00000463487 AFPP02771 609 aaKnown RBP21.21■□□□□ 0.99
COL9A3-204ENST00000463487 TPM2P07951 284 aa21.21■□□□□ 0.99
COL9A3-204ENST00000463487 EPCAMP16422 314 aa21.21■□□□□ 0.99
COL9A3-204ENST00000463487 FMO5P49326 533 aa21.21■□□□□ 0.99
COL9A3-204ENST00000463487 NOP14P78316 857 aaKnown RBP21.21■□□□□ 0.99
COL9A3-204ENST00000463487 ROR1Q01973 937 aa21.21■□□□□ 0.99
COL9A3-204ENST00000463487 SMARCB1Q12824 385 aa21.21■□□□□ 0.99
COL9A3-204ENST00000463487 KCNC3Q14003 757 aa21.21■□□□□ 0.99
COL9A3-204ENST00000463487 SOWAHAQ2M3V2 549 aa21.21■□□□□ 0.99
COL9A3-204ENST00000463487 ANKRD54Q6NXT1 300 aa21.21■□□□□ 0.99
COL9A3-204ENST00000463487 CCDC149Q6ZUS6 474 aa21.21■□□□□ 0.99
COL9A3-204ENST00000463487 RTL10Q7L3V2 364 aa21.21■□□□□ 0.99
COL9A3-204ENST00000463487 DCP1BQ8IZD4 617 aaKnown RBP21.21■□□□□ 0.99
COL9A3-204ENST00000463487 ANKRD20A12PQ8NF67 263 aa21.21■□□□□ 0.99
COL9A3-204ENST00000463487 ZNF461Q8TAF7 563 aa21.21■□□□□ 0.99
COL9A3-204ENST00000463487 FAXDC2Q96IV6 333 aa21.21■□□□□ 0.99
COL9A3-204ENST00000463487 MAN1C1Q9NR34 630 aa21.21■□□□□ 0.99
COL9A3-204ENST00000463487 BARX2Q9UMQ3 279 aaPredicted RBP21.21■□□□□ 0.99
COL9A3-204ENST00000463487 TBX10O75333 385 aa21.2■□□□□ 0.98
COL9A3-204ENST00000463487 TACC1O75410 805 aa21.2■□□□□ 0.98
COL9A3-204ENST00000463487 EEF1GP26641 437 aaKnown RBP21.2■□□□□ 0.98
COL9A3-204ENST00000463487 KCNH2Q12809 1159 aa21.2■□□□□ 0.98
COL9A3-204ENST00000463487 PUS10Q3MIT2 529 aaKnown RBP21.2■□□□□ 0.98
COL9A3-204ENST00000463487 ANO6Q4KMQ2 910 aa21.2■□□□□ 0.98
COL9A3-204ENST00000463487 CBWD6Q4V339 395 aa21.2■□□□□ 0.98
COL9A3-204ENST00000463487 CBWD3Q5JTY5 395 aa21.2■□□□□ 0.98
COL9A3-204ENST00000463487 CBWD5Q5RIA9 395 aa21.2■□□□□ 0.98
COL9A3-204ENST00000463487 C11orf57Q6ZUT1 292 aaPredicted RBP21.2■□□□□ 0.98
COL9A3-204ENST00000463487 KREMEN2Q8NCW0 462 aa21.2■□□□□ 0.98
COL9A3-204ENST00000463487 ACBD6Q9BR61 282 aa21.2■□□□□ 0.98
COL9A3-204ENST00000463487 NIF3L1Q9GZT8 377 aa21.2■□□□□ 0.98
COL9A3-204ENST00000463487 DDX43Q9NXZ2 648 aaKnown RBP21.2■□□□□ 0.98
COL9A3-204ENST00000463487 CD207Q9UJ71 328 aa21.2■□□□□ 0.98
COL9A3-204ENST00000463487 TSC2P49815 1807 aa21.2■□□□□ 0.98
COL9A3-204ENST00000463487 SMTNL1A8MU46 457 aa21.19■□□□□ 0.98
COL9A3-204ENST00000463487 ADAM12O43184 909 aa21.19■□□□□ 0.98
COL9A3-204ENST00000463487 CAVIN2O95810 425 aa21.19■□□□□ 0.98
COL9A3-204ENST00000463487 WARSP23381 471 aaKnown RBP21.19■□□□□ 0.98
COL9A3-204ENST00000463487 ITIH3Q06033 890 aa21.19■□□□□ 0.98
COL9A3-204ENST00000463487 UVSSAQ2YD98 709 aa21.19■□□□□ 0.98
COL9A3-204ENST00000463487 CES5AQ6NT32 575 aa21.19■□□□□ 0.98
COL9A3-204ENST00000463487 LILRA6Q6PI73 481 aa21.19■□□□□ 0.98
COL9A3-204ENST00000463487 VN1R2Q8NFZ6 395 aa21.19■□□□□ 0.98
COL9A3-204ENST00000463487 ATXN2LQ8WWM7 1075 aaKnown RBP21.19■□□□□ 0.98
COL9A3-204ENST00000463487 BPIFA3Q9BQP9 254 aa21.19■□□□□ 0.98
COL9A3-204ENST00000463487 ZDHHC7Q9NXF8 308 aa21.19■□□□□ 0.98
COL9A3-204ENST00000463487 AFF4Q9UHB7 1163 aaKnown RBP21.19■□□□□ 0.98
COL9A3-204ENST00000463487 FBXW11Q9UKB1 542 aa21.19■□□□□ 0.98
COL9A3-204ENST00000463487 COQ4Q9Y3A0 265 aa21.19■□□□□ 0.98
COL9A3-204ENST00000463487 WDR27A2RRH5 827 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 KCNJ18B7U540 433 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 PRRG1O14668 218 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 GABRDO14764 452 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 ABLIM3O94929 683 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 ATF2P15336 505 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 GPR17Q13304 367 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 KCNJ12Q14500 433 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 MAPRE1Q15691 268 aaKnown RBP21.18■□□□□ 0.98
COL9A3-204ENST00000463487 NFE2Q16621 373 aaPredicted RBP21.18■□□□□ 0.98
COL9A3-204ENST00000463487 MAN2A1Q16706 1144 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 ZSCAN23Q3MJ62 389 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 LEXMQ3ZCV2 418 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 PPM1LQ5SGD2 360 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 SCARA3Q6AZY7 606 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 RSPO2Q6UXX9 243 aaPredicted RBP21.18■□□□□ 0.98
COL9A3-204ENST00000463487 CYP26C1Q6V0L0 522 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 SCARA5Q6ZMJ2 495 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 LIMS2Q7Z4I7 341 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 TTC39CQ8N584 583 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 OR6B3Q8NGW1 331 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 C2orf15Q8WU43 125 aaKnown RBP21.18■□□□□ 0.98
COL9A3-204ENST00000463487 PI4K2AQ9BTU6 479 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 ZCWPW1Q9H0M4 648 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 FAM124BQ9H5Z6 455 aaPredicted RBP21.18■□□□□ 0.98
COL9A3-204ENST00000463487 CYP3A43Q9HB55 503 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 CLEC1BQ9P126 229 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 CDH9Q9ULB4 789 aa21.18■□□□□ 0.98
COL9A3-204ENST00000463487 H3BQ06 376 aaPredicted RBP21.17■□□□□ 0.98
COL9A3-204ENST00000463487 SLC34A2O95436 690 aa21.17■□□□□ 0.98
COL9A3-204ENST00000463487 C8AP07357 584 aa21.17■□□□□ 0.98
COL9A3-204ENST00000463487 SPATA31D3P0C874 917 aa21.17■□□□□ 0.98
COL9A3-204ENST00000463487 GNL1P36915 607 aaPredicted RBP21.17■□□□□ 0.98
COL9A3-204ENST00000463487 LTBRP36941 435 aa21.17■□□□□ 0.98
COL9A3-204ENST00000463487 ZNF165P49910 485 aa21.17■□□□□ 0.98
COL9A3-204ENST00000463487 MRPS5P82675 430 aaKnown RBP21.17■□□□□ 0.98
COL9A3-204ENST00000463487 RBM10P98175 930 aaKnown RBP21.17■□□□□ 0.98
COL9A3-204ENST00000463487 SPATA31D4Q6ZUB0 917 aa21.17■□□□□ 0.98
COL9A3-204ENST00000463487 OR10T2Q8NGX3 314 aa21.17■□□□□ 0.98
COL9A3-204ENST00000463487 MSLNLQ96KJ4 702 aa21.17■□□□□ 0.98
COL9A3-204ENST00000463487 TUBGCP2Q9BSJ2 902 aa21.17■□□□□ 0.98
COL9A3-204ENST00000463487 CYP4F11Q9HBI6 524 aa21.17■□□□□ 0.98
COL9A3-204ENST00000463487 SAMSN1Q9NSI8 373 aaKnown RBP21.17■□□□□ 0.98
COL9A3-204ENST00000463487 POLIQ9UNA4 740 aa21.17■□□□□ 0.98
COL9A3-204ENST00000463487 PLXNA3P51805 1871 aa21.16■□□□□ 0.98
COL9A3-204ENST00000463487 BECN2A8MW95 431 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms