RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 LRRTM3Q86VH5 581 aa19.02■□□□□ 0.64
VPS52-214ENST00000463486 OSTM1Q86WC4 334 aa19.02■□□□□ 0.64
VPS52-214ENST00000463486 TOP6BLQ8N6T0 577 aa19.02■□□□□ 0.64
VPS52-214ENST00000463486 KBTBD7Q8WVZ9 684 aa19.02■□□□□ 0.64
VPS52-214ENST00000463486 ZCWPW1Q9H0M4 648 aa19.02■□□□□ 0.64
VPS52-214ENST00000463486 AFF4Q9UHB7 1163 aaKnown RBP19.02■□□□□ 0.64
VPS52-214ENST00000463486 SNX9Q9Y5X1 595 aa19.02■□□□□ 0.64
VPS52-214ENST00000463486 PSMA7O14818 248 aa19.01■□□□□ 0.63
VPS52-214ENST00000463486 CETN3O15182 167 aa19.01■□□□□ 0.63
VPS52-214ENST00000463486 POU2F2P09086 479 aa19.01■□□□□ 0.63
VPS52-214ENST00000463486 HNRNPA1P09651 372 aaKnown RBP eCLIP19.01■□□□□ 0.63
VPS52-214ENST00000463486 PPP1R2P41236 205 aa19.01■□□□□ 0.63
VPS52-214ENST00000463486 MTHFRP42898 656 aa19.01■□□□□ 0.63
VPS52-214ENST00000463486 MYO1EQ12965 1108 aa19.01■□□□□ 0.63
VPS52-214ENST00000463486 DPH6Q7L8W6 267 aa19.01■□□□□ 0.63
VPS52-214ENST00000463486 SLC7A14Q8TBB6 771 aa19.01■□□□□ 0.63
VPS52-214ENST00000463486 NECTIN4Q96NY8 510 aa19.01■□□□□ 0.63
VPS52-214ENST00000463486 PKMYT1Q99640 499 aa19.01■□□□□ 0.63
VPS52-214ENST00000463486 VRTNQ9H8Y1 702 aa19.01■□□□□ 0.63
VPS52-214ENST00000463486 MAFFQ9ULX9 164 aa19.01■□□□□ 0.63
VPS52-214ENST00000463486 DOCK6Q96HP0 2047 aa19.01■□□□□ 0.63
VPS52-214ENST00000463486 HCRTO43612 131 aa19■□□□□ 0.63
VPS52-214ENST00000463486 HUS1O60921 280 aa19■□□□□ 0.63
VPS52-214ENST00000463486 TRIM49P0CI25 452 aa19■□□□□ 0.63
VPS52-214ENST00000463486 TRIM49CP0CI26 452 aa19■□□□□ 0.63
VPS52-214ENST00000463486 GJD3Q8N144 294 aa19■□□□□ 0.63
VPS52-214ENST00000463486 TMEM86AQ8N2M4 240 aa19■□□□□ 0.63
VPS52-214ENST00000463486 NELFBQ8WX92 580 aa19■□□□□ 0.63
VPS52-214ENST00000463486 ELMO3Q96BJ8 720 aa19■□□□□ 0.63
VPS52-214ENST00000463486 RIPOR3Q96MK2 946 aa19■□□□□ 0.63
VPS52-214ENST00000463486 TSG101Q99816 390 aa19■□□□□ 0.63
VPS52-214ENST00000463486 WDR6Q9NNW5 1121 aaKnown RBP19■□□□□ 0.63
VPS52-214ENST00000463486 NME7Q9Y5B8 376 aa19■□□□□ 0.63
VPS52-214ENST00000463486 DENND4AQ7Z401 1863 aa18.99■□□□□ 0.63
VPS52-214ENST00000463486 SLC16A3O15427 465 aaKnown RBP18.99■□□□□ 0.63
VPS52-214ENST00000463486 ATICP31939 592 aa18.99■□□□□ 0.63
VPS52-214ENST00000463486 GCLMP48507 274 aa18.99■□□□□ 0.63
VPS52-214ENST00000463486 ADCY1Q08828 1119 aa18.99■□□□□ 0.63
VPS52-214ENST00000463486 STIM1Q13586 685 aa18.99■□□□□ 0.63
VPS52-214ENST00000463486 NCOA4Q13772 614 aa18.99■□□□□ 0.63
VPS52-214ENST00000463486 PPM1LQ5SGD2 360 aa18.99■□□□□ 0.63
VPS52-214ENST00000463486 LIN9Q5TKA1 542 aa18.99■□□□□ 0.63
VPS52-214ENST00000463486 KLHL10Q6JEL2 608 aa18.99■□□□□ 0.63
VPS52-214ENST00000463486 ELMSAN1Q6PJG2 1045 aa18.99■□□□□ 0.63
VPS52-214ENST00000463486 METTL23Q86XA0 190 aa18.99■□□□□ 0.63
VPS52-214ENST00000463486 SPATA18Q8TC71 538 aa18.99■□□□□ 0.63
VPS52-214ENST00000463486 SMG7Q92540 1137 aaKnown RBP18.99■□□□□ 0.63
VPS52-214ENST00000463486 KHSRPQ92945 711 aaKnown RBP eCLIP18.99■□□□□ 0.63
VPS52-214ENST00000463486 NUP62CLQ9H1M0 184 aa18.99■□□□□ 0.63
VPS52-214ENST00000463486 TMLHEQ9NVH6 421 aa18.99■□□□□ 0.63
VPS52-214ENST00000463486 NOTCH4Q99466 2003 aa18.98■□□□□ 0.63
VPS52-214ENST00000463486 MTMR11A4FU01 709 aa18.98■□□□□ 0.63
VPS52-214ENST00000463486 DLL1O00548 723 aa18.98■□□□□ 0.63
VPS52-214ENST00000463486 N4BP1O75113 896 aaKnown RBP18.98■□□□□ 0.63
VPS52-214ENST00000463486 LRRN2O75325 713 aa18.98■□□□□ 0.63
VPS52-214ENST00000463486 FAM163BP0C2L3 166 aa18.98■□□□□ 0.63
VPS52-214ENST00000463486 CPB1P15086 417 aa18.98■□□□□ 0.63
VPS52-214ENST00000463486 WDR72Q3MJ13 1102 aa18.98■□□□□ 0.63
VPS52-214ENST00000463486 RBM43Q6ZSC3 357 aaKnown RBP18.98■□□□□ 0.63
VPS52-214ENST00000463486 CCDC149Q6ZUS6 474 aa18.98■□□□□ 0.63
VPS52-214ENST00000463486 FILIP1Q7Z7B0 1213 aa18.98■□□□□ 0.63
VPS52-214ENST00000463486 ADGRF2Q8IZF7 708 aa18.98■□□□□ 0.63
VPS52-214ENST00000463486 THEM5Q8N1Q8 247 aa18.98■□□□□ 0.63
VPS52-214ENST00000463486 TTC9BQ8N6N2 239 aa18.98■□□□□ 0.63
VPS52-214ENST00000463486 ATAD1Q8NBU5 361 aa18.98■□□□□ 0.63
VPS52-214ENST00000463486 CEP63Q96MT8 703 aa18.98■□□□□ 0.63
VPS52-214ENST00000463486 PGLYRP2Q96PD5 576 aa18.98■□□□□ 0.63
VPS52-214ENST00000463486 ACBD6Q9BR61 282 aa18.98■□□□□ 0.63
VPS52-214ENST00000463486 CYP4F11Q9HBI6 524 aa18.98■□□□□ 0.63
VPS52-214ENST00000463486 CTNND2Q9UQB3 1225 aa18.98■□□□□ 0.63
VPS52-214ENST00000463486 INSL5Q9Y5Q6 135 aa18.98■□□□□ 0.63
VPS52-214ENST00000463486 CCL16O15467 120 aa18.97■□□□□ 0.63
VPS52-214ENST00000463486 PHACTR2O75167 634 aa18.97■□□□□ 0.63
VPS52-214ENST00000463486 TACC1O75410 805 aa18.97■□□□□ 0.63
VPS52-214ENST00000463486 ASS1P00966 412 aaKnown RBP18.97■□□□□ 0.63
VPS52-214ENST00000463486 EPB41P11171 864 aaKnown RBP18.97■□□□□ 0.63
VPS52-214ENST00000463486 KRT13P13646 458 aa18.97■□□□□ 0.63
VPS52-214ENST00000463486 WARSP23381 471 aaKnown RBP18.97■□□□□ 0.63
VPS52-214ENST00000463486 LMO2P25791 158 aa18.97■□□□□ 0.63
VPS52-214ENST00000463486 GTF2H1P32780 548 aa18.97■□□□□ 0.63
VPS52-214ENST00000463486 STX17P56962 302 aa18.97■□□□□ 0.63
VPS52-214ENST00000463486 DUSP4Q13115 394 aa18.97■□□□□ 0.63
VPS52-214ENST00000463486 PAK1Q13153 545 aa18.97■□□□□ 0.63
VPS52-214ENST00000463486 BIRC3Q13489 604 aa18.97■□□□□ 0.63
VPS52-214ENST00000463486 TRPC3Q13507 836 aa18.97■□□□□ 0.63
VPS52-214ENST00000463486 CCDC142Q17RM4 750 aa18.97■□□□□ 0.63
VPS52-214ENST00000463486 SLC39A12Q504Y0 691 aa18.97■□□□□ 0.63
VPS52-214ENST00000463486 TAS1R2Q8TE23 839 aa18.97■□□□□ 0.63
VPS52-214ENST00000463486 SYAP1Q96A49 352 aaPredicted RBP18.97■□□□□ 0.63
VPS52-214ENST00000463486 RPGRIP1Q96KN7 1286 aa18.97■□□□□ 0.63
VPS52-214ENST00000463486 MRPL45Q9BRJ2 306 aaKnown RBP18.97■□□□□ 0.63
VPS52-214ENST00000463486 DDX43Q9NXZ2 648 aaKnown RBP18.97■□□□□ 0.63
VPS52-214ENST00000463486 DNMT3BQ9UBC3 853 aaKnown RBP18.97■□□□□ 0.63
VPS52-214ENST00000463486 POLIQ9UNA4 740 aa18.97■□□□□ 0.63
VPS52-214ENST00000463486 SPDYE4A6NLX3 237 aa18.96■□□□□ 0.63
VPS52-214ENST00000463486 HLA-DRAP01903 254 aa18.96■□□□□ 0.63
VPS52-214ENST00000463486 ACAT1P24752 427 aaKnown RBP18.96■□□□□ 0.63
VPS52-214ENST00000463486 LHX1P48742 406 aa18.96■□□□□ 0.63
VPS52-214ENST00000463486 CDR1P51861 262 aa18.96■□□□□ 0.63
VPS52-214ENST00000463486 NTHL1P78549 312 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms