RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 MTMR3Q13615 1198 aa19.91■□□□□ 0.78
CDKN1A-206ENST00000462537 TMEM86AQ8N2M4 240 aa19.91■□□□□ 0.78
CDKN1A-206ENST00000462537 PDCL2Q8N4E4 241 aa19.91■□□□□ 0.78
CDKN1A-206ENST00000462537 CORO1BQ9BR76 489 aa19.91■□□□□ 0.78
CDKN1A-206ENST00000462537 LRFN3Q9BTN0 628 aa19.91■□□□□ 0.78
CDKN1A-206ENST00000462537 ZCWPW1Q9H0M4 648 aa19.91■□□□□ 0.78
CDKN1A-206ENST00000462537 C11orf16Q9NQ32 467 aa19.91■□□□□ 0.78
CDKN1A-206ENST00000462537 GDAP2Q9NXN4 497 aa19.91■□□□□ 0.78
CDKN1A-206ENST00000462537 EPS15L1Q9UBC2 864 aa19.91■□□□□ 0.78
CDKN1A-206ENST00000462537 SLC27A5Q9Y2P5 690 aa19.91■□□□□ 0.78
CDKN1A-206ENST00000462537 YIPF1Q9Y548 306 aa19.91■□□□□ 0.78
CDKN1A-206ENST00000462537 DOCK6Q96HP0 2047 aa19.91■□□□□ 0.78
CDKN1A-206ENST00000462537 VNN2O95498 520 aa19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 RHOP08100 348 aa19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 NR2F2P24468 414 aa19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 ALDH1A3P47895 512 aa19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 TSPY1Q01534 308 aa19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 PLD1Q13393 1074 aa19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 BIRC3Q13489 604 aa19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 TRPC3Q13507 836 aa19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 IQCEQ6IPM2 695 aa19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 DCP1BQ8IZD4 617 aaKnown RBP19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 ADGRF2Q8IZF7 708 aa19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 TOP6BLQ8N6T0 577 aa19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 ATAD1Q8NBU5 361 aa19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 ITFG1Q8TB96 612 aa19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 PLEKHO2Q8TD55 490 aa19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 ZNF512Q96ME7 567 aaPredicted RBP19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 GSDMAQ96QA5 445 aa19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 RTP3Q9BQQ7 232 aa19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 DDX43Q9NXZ2 648 aaKnown RBP19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 MRPS23Q9Y3D9 190 aaKnown RBP19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 PCDHA5Q9Y5H7 936 aa19.9■□□□□ 0.78
CDKN1A-206ENST00000462537 LRRIQ3A6PVS8 624 aaPredicted RBP19.89■□□□□ 0.77
CDKN1A-206ENST00000462537 LAMP2P13473 410 aa19.89■□□□□ 0.77
CDKN1A-206ENST00000462537 MYL7Q01449 175 aa19.89■□□□□ 0.77
CDKN1A-206ENST00000462537 ZNF658Q5TYW1 1059 aaPredicted RBP19.89■□□□□ 0.77
CDKN1A-206ENST00000462537 CENPPQ6IPU0 288 aa19.89■□□□□ 0.77
CDKN1A-206ENST00000462537 TRIM67Q6ZTA4 783 aa19.89■□□□□ 0.77
CDKN1A-206ENST00000462537 UBALD2Q8IYN6 164 aa19.89■□□□□ 0.77
CDKN1A-206ENST00000462537 PARD3BQ8TEW8 1205 aa19.89■□□□□ 0.77
CDKN1A-206ENST00000462537 TMEM174Q8WUU8 243 aa19.89■□□□□ 0.77
CDKN1A-206ENST00000462537 ING5Q8WYH8 240 aa19.89■□□□□ 0.77
CDKN1A-206ENST00000462537 ZNF516Q92618 1163 aa19.89■□□□□ 0.77
CDKN1A-206ENST00000462537 MMS19Q96T76 1030 aa19.89■□□□□ 0.77
CDKN1A-206ENST00000462537 GZF1Q9H116 711 aaPredicted RBP19.89■□□□□ 0.77
CDKN1A-206ENST00000462537 CRISPLD1Q9H336 500 aa19.89■□□□□ 0.77
CDKN1A-206ENST00000462537 KCNK12Q9HB15 430 aa19.89■□□□□ 0.77
CDKN1A-206ENST00000462537 IGSF9Q9P2J2 1179 aa19.89■□□□□ 0.77
CDKN1A-206ENST00000462537 CDH7Q9ULB5 785 aa19.89■□□□□ 0.77
CDKN1A-206ENST00000462537 ZFP37Q9Y6Q3 630 aaPredicted RBP19.89■□□□□ 0.77
CDKN1A-206ENST00000462537 PRR33A8MZF0 331 aa19.88■□□□□ 0.77
CDKN1A-206ENST00000462537 CST3P01034 146 aaPredicted RBP19.88■□□□□ 0.77
CDKN1A-206ENST00000462537 ACAT1P24752 427 aaKnown RBP19.88■□□□□ 0.77
CDKN1A-206ENST00000462537 RPL13P26373 211 aaKnown RBP19.88■□□□□ 0.77
CDKN1A-206ENST00000462537 AP3M2P53677 418 aa19.88■□□□□ 0.77
CDKN1A-206ENST00000462537 EPHB3P54753 998 aa19.88■□□□□ 0.77
CDKN1A-206ENST00000462537 SIGLEC14Q08ET2 396 aa19.88■□□□□ 0.77
CDKN1A-206ENST00000462537 PDZD4Q76G19 769 aaPredicted RBP19.88■□□□□ 0.77
CDKN1A-206ENST00000462537 RSAD2Q8WXG1 361 aa19.88■□□□□ 0.77
CDKN1A-206ENST00000462537 FGF13Q92913 245 aa19.88■□□□□ 0.77
CDKN1A-206ENST00000462537 SEPT5Q99719 369 aaPredicted RBP19.88■□□□□ 0.77
CDKN1A-206ENST00000462537 SMOC2Q9H3U7 446 aa19.88■□□□□ 0.77
CDKN1A-206ENST00000462537 ABI2Q9NYB9 513 aaPredicted RBP19.88■□□□□ 0.77
CDKN1A-206ENST00000462537 CEP72Q9P209 647 aa19.88■□□□□ 0.77
CDKN1A-206ENST00000462537 DOCK8Q8NF50 2099 aa19.88■□□□□ 0.77
CDKN1A-206ENST00000462537 MYO10Q9HD67 2058 aa19.88■□□□□ 0.77
CDKN1A-206ENST00000462537 NOTCH4Q99466 2003 aa19.88■□□□□ 0.77
CDKN1A-206ENST00000462537 TMEM221A6NGB7 291 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 M0R296 226 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 SOAT2O75908 522 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 PRCPP42785 496 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 LHX1P48742 406 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 TNNC1P63316 161 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 SMARCB1Q12824 385 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 ADAM9Q13443 819 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 TDGQ13569 410 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 NFIL3Q16649 462 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 SLC5A9Q2M3M2 681 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 SOWAHAQ2M3V2 549 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 MGAT5BQ3V5L5 792 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 CYP4A22Q5TCH4 519 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 TDRD10Q5VZ19 366 aaKnown RBP19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 LRRTM3Q86VH5 581 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 OSTM1Q86WC4 334 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 HS6ST3Q8IZP7 471 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 TTC9BQ8N6N2 239 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 ST13P5Q8NFI4 369 aaPredicted RBP19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 SPATA18Q8TC71 538 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 FAM200AQ8TCP9 573 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 C2orf15Q8WU43 125 aaKnown RBP19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 ACBD6Q9BR61 282 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 GTPBP4Q9BZE4 634 aaKnown RBP19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 ASAH2Q9NR71 780 aa19.87■□□□□ 0.77
CDKN1A-206ENST00000462537 MYL4P12829 197 aa19.86■□□□□ 0.77
CDKN1A-206ENST00000462537 KRT13P13646 458 aa19.86■□□□□ 0.77
CDKN1A-206ENST00000462537 PCSK1P29120 753 aa19.86■□□□□ 0.77
CDKN1A-206ENST00000462537 TUFMP49411 452 aaKnown RBP19.86■□□□□ 0.77
CDKN1A-206ENST00000462537 MYL6P60660 151 aa19.86■□□□□ 0.77
CDKN1A-206ENST00000462537 UBE2HP62256 183 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms