RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 ZCCHC9Q8N567 271 aaKnown RBP17.91■□□□□ 0.46
ACTB-207ENST00000462494 SLC16A10Q8TF71 515 aa17.91■□□□□ 0.46
ACTB-207ENST00000462494 MRPL4Q9BYD3 311 aaKnown RBP17.91■□□□□ 0.46
ACTB-207ENST00000462494 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.91■□□□□ 0.46
ACTB-207ENST00000462494 LCTP09848 1927 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 TCEA3O75764 348 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 DNAJC8O75937 253 aaPredicted RBP17.9■□□□□ 0.46
ACTB-207ENST00000462494 STX2P32856 288 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 TFAMQ00059 246 aaKnown RBP17.9■□□□□ 0.46
ACTB-207ENST00000462494 PLCB3Q01970 1234 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 OGDHQ02218 1023 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 GPS1Q13098 491 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 STAT4Q14765 748 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 TARBP2Q15633 366 aaKnown RBP17.9■□□□□ 0.46
ACTB-207ENST00000462494 FAM160B1Q5W0V3 765 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 CAPN12Q6ZSI9 719 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 TMEM35BQ8NCS4 154 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 TRPM4Q8TD43 1214 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 ZNF668Q96K58 619 aaPredicted RBP17.9■□□□□ 0.46
ACTB-207ENST00000462494 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.9■□□□□ 0.462e-18■□□□□ 10.5
ACTB-207ENST00000462494 USP15Q9Y4E8 981 aaPredicted RBP17.9■□□□□ 0.46
ACTB-207ENST00000462494 LRRD1A4D1F6 860 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 TOM1L1O75674 476 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 OSTNP61366 133 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 XRCC4Q13426 336 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 LY6KQ17RY6 165 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 EAPPQ56P03 285 aaPredicted RBP17.9■□□□□ 0.46
ACTB-207ENST00000462494 TREML2Q5T2D2 321 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 ZPBP2Q6X784 338 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 SPOCD1Q6ZMY3 1216 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 LRRC71Q8N4P6 559 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 UBR7Q8N806 425 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 CKAP2Q8WWK9 683 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 KCNN1Q92952 543 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 SGSM3Q96HU1 749 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 NKIRAS1Q9NYS0 192 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 GGA3Q9NZ52 723 aa17.9■□□□□ 0.46
ACTB-207ENST00000462494 EXOC1LA0A1B0GW35 172 aa17.89■□□□□ 0.45
ACTB-207ENST00000462494 RASA4BC9J798 803 aa17.89■□□□□ 0.45
ACTB-207ENST00000462494 DNALI1O14645 258 aaPredicted RBP17.89■□□□□ 0.45
ACTB-207ENST00000462494 RASA4O43374 803 aa17.89■□□□□ 0.45
ACTB-207ENST00000462494 MSCO60682 206 aa17.89■□□□□ 0.45
ACTB-207ENST00000462494 MAFO75444 373 aaPredicted RBP17.89■□□□□ 0.45
ACTB-207ENST00000462494 AP3M2P53677 418 aa17.89■□□□□ 0.45
ACTB-207ENST00000462494 DUOXA2Q1HG44 320 aa17.89■□□□□ 0.45
ACTB-207ENST00000462494 ERICH1Q86X53 443 aa17.89■□□□□ 0.45
ACTB-207ENST00000462494 NCAPG2Q86XI2 1143 aa17.89■□□□□ 0.45
ACTB-207ENST00000462494 RNF149Q8NC42 400 aa17.89■□□□□ 0.45
ACTB-207ENST00000462494 TGS1Q96RS0 853 aaKnown RBP17.89■□□□□ 0.45
ACTB-207ENST00000462494 PAIP2Q9BPZ3 127 aaKnown RBP17.89■□□□□ 0.45
ACTB-207ENST00000462494 NIF3L1Q9GZT8 377 aa17.89■□□□□ 0.45
ACTB-207ENST00000462494 LGALS13Q9UHV8 139 aa17.89■□□□□ 0.45
ACTB-207ENST00000462494 FAM189A1O60320 539 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 LSM8O95777 96 aaKnown RBP17.88■□□□□ 0.45
ACTB-207ENST00000462494 IFNB1P01574 187 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 SNCBQ16143 134 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 SGSM1Q2NKQ1 1148 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 ARHGEF18Q6ZSZ5 1173 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 ALLCQ8N6M5 410 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 CCHCR1Q8TD31 782 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 TFAP2BQ92481 460 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 ACO2Q99798 780 aaKnown RBP17.88■□□□□ 0.45
ACTB-207ENST00000462494 BTBD7Q9P203 1132 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 SLC12A4Q9UP95 1085 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 SIP14410 1827 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 POC1B-GALNT4F8VUJ3 575 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 GOLGA8SH3BPF8 625 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 FZD9O00144 591 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 SUN1O94901 812 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 PRKCBP05771 671 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 PECAM1P16284 738 aaPredicted RBP17.88■□□□□ 0.45
ACTB-207ENST00000462494 BAG6P46379 1132 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 EFNA5P52803 228 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 LAMTOR4Q0VGL1 99 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 NEDD9Q14511 834 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 FASTKD3Q14CZ7 662 aaKnown RBP17.88■□□□□ 0.45
ACTB-207ENST00000462494 TMEM132AQ24JP5 1023 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 ZNF699Q32M78 642 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 TFDP3Q5H9I0 405 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 TRIM50Q86XT4 487 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 RELL1Q8IUW5 271 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 THNSL1Q8IYQ7 743 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 WDTC1Q8N5D0 677 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 MRRFQ96E11 262 aaKnown RBP17.88■□□□□ 0.45
ACTB-207ENST00000462494 CFAP57Q96MR6 1250 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 TMEM121Q9BTD3 319 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 NXF1Q9UBU9 619 aaKnown RBP17.88■□□□□ 0.45
ACTB-207ENST00000462494 TPX2Q9ULW0 747 aaKnown RBP17.88■□□□□ 0.45
ACTB-207ENST00000462494 CEP83Q9Y592 693 aa17.88■□□□□ 0.45
ACTB-207ENST00000462494 SOWAHBA6NEL2 793 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 SGK1O00141 431 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 OGTO15294 1046 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 OAS1P00973 400 aaKnown RBP17.87■□□□□ 0.45
ACTB-207ENST00000462494 PSMC4P43686 418 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 DYNLT1P63172 113 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 CDR2LQ86X02 465 aaPredicted RBP17.87■□□□□ 0.45
ACTB-207ENST00000462494 SEPT1Q8WYJ6 367 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 hCG_1818297A0A087WSY0 165 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 TCRBV5S1A1TA0A578 114 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 CHUKO15111 745 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms