RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 ZNF568Q3ZCX4 644 aa16.65■□□□□ 0.26
APP-211ENST00000462267 BMP2KLQ5H9B9 411 aa16.65■□□□□ 0.26
APP-211ENST00000462267 C19orf48Q6RUI8 117 aa16.65■□□□□ 0.26
APP-211ENST00000462267 ABCA7Q8IZY2 2146 aa16.65■□□□□ 0.26
APP-211ENST00000462267 RPLP0P6Q8NHW5 317 aa16.65■□□□□ 0.26
APP-211ENST00000462267 ZNF274Q96GC6 653 aaPredicted RBP16.65■□□□□ 0.26
APP-211ENST00000462267 P2RY13Q9BPV8 354 aa16.65■□□□□ 0.26
APP-211ENST00000462267 KIFC3Q9BVG8 833 aa16.65■□□□□ 0.26
APP-211ENST00000462267 EBF3Q9H4W6 596 aa16.65■□□□□ 0.26
APP-211ENST00000462267 FBRSL1Q9HCM7 1045 aaKnown RBP16.65■□□□□ 0.26
APP-211ENST00000462267 PTPRHQ9HD43 1115 aa16.65■□□□□ 0.26
APP-211ENST00000462267 TUFT1Q9NNX1 390 aa16.65■□□□□ 0.26
APP-211ENST00000462267 SLC27A5Q9Y2P5 690 aa16.65■□□□□ 0.26
APP-211ENST00000462267 KIF26AQ9ULI4 1882 aaPredicted RBP16.65■□□□□ 0.26
APP-211ENST00000462267 LOC400499M0QZD8 3231 aa16.64■□□□□ 0.26
APP-211ENST00000462267 SMG1Q96Q15 3661 aaKnown RBP16.64■□□□□ 0.25
APP-211ENST00000462267 SPAARA0A1B0GVQ0 90 aa16.64■□□□□ 0.25
APP-211ENST00000462267 UPK3BL1B0FP48 263 aa16.64■□□□□ 0.25
APP-211ENST00000462267 UPK3BL2E5RIL1 263 aa16.64■□□□□ 0.25
APP-211ENST00000462267 K7ERI5 159 aa16.64■□□□□ 0.25
APP-211ENST00000462267 OR4Q2P0C623 313 aa16.64■□□□□ 0.25
APP-211ENST00000462267 EARS2Q5JPH6 523 aaKnown RBP16.64■□□□□ 0.25
APP-211ENST00000462267 PIP4P1Q86T03 277 aa16.64■□□□□ 0.25
APP-211ENST00000462267 CATSPER3Q86XQ3 398 aa16.64■□□□□ 0.25
APP-211ENST00000462267 ATAD1Q8NBU5 361 aa16.64■□□□□ 0.25
APP-211ENST00000462267 TSTD1Q8NFU3 115 aa16.64■□□□□ 0.25
APP-211ENST00000462267 GCNAQ96QF7 691 aa16.64■□□□□ 0.25
APP-211ENST00000462267 ACO2Q99798 780 aaKnown RBP16.64■□□□□ 0.25
APP-211ENST00000462267 SLC46A2Q9BY10 475 aa16.64■□□□□ 0.25
APP-211ENST00000462267 HSFX1Q9UBD0 423 aa16.64■□□□□ 0.25
APP-211ENST00000462267 INVSQ9Y283 1065 aa16.64■□□□□ 0.25
APP-211ENST00000462267 ARHGEF35A5YM69 484 aa16.63■□□□□ 0.25
APP-211ENST00000462267 CYP4F8P98187 520 aa16.63■□□□□ 0.25
APP-211ENST00000462267 TOB2Q14106 344 aaPredicted RBP16.63■□□□□ 0.25
APP-211ENST00000462267 MYBPC2Q14324 1141 aa16.63■□□□□ 0.25
APP-211ENST00000462267 TRIM61Q5EBN2 209 aa16.63■□□□□ 0.25
APP-211ENST00000462267 USP37Q86T82 979 aa16.63■□□□□ 0.25
APP-211ENST00000462267 CMTM8Q8IZV2 173 aa16.63■□□□□ 0.25
APP-211ENST00000462267 CCDC26Q8TAB7 109 aa16.63■□□□□ 0.25
APP-211ENST00000462267 PIGKQ92643 395 aa16.63■□□□□ 0.25
APP-211ENST00000462267 POLR3CQ9BUI4 534 aaPredicted RBP16.63■□□□□ 0.25
APP-211ENST00000462267 NUSAP1Q9BXS6 441 aaKnown RBP16.63■□□□□ 0.25
APP-211ENST00000462267 SMG9Q9H0W8 520 aaKnown RBP16.63■□□□□ 0.25
APP-211ENST00000462267 LAMA5O15230 3695 aa16.63■□□□□ 0.25
APP-211ENST00000462267 MTMR11A4FU01 709 aa16.62■□□□□ 0.25
APP-211ENST00000462267 NEMFO60524 1076 aa16.62■□□□□ 0.25
APP-211ENST00000462267 MCF2P10911 925 aa16.62■□□□□ 0.25
APP-211ENST00000462267 MAPK8P45983 427 aa16.62■□□□□ 0.25
APP-211ENST00000462267 DHPSP49366 369 aaPredicted RBP16.62■□□□□ 0.25
APP-211ENST00000462267 SEMA3BQ13214 749 aa16.62■□□□□ 0.25
APP-211ENST00000462267 VEPH1Q14D04 833 aa16.62■□□□□ 0.25
APP-211ENST00000462267 COL28A1Q2UY09 1125 aa16.62■□□□□ 0.25
APP-211ENST00000462267 TRIM68Q6AZZ1 485 aa16.62■□□□□ 0.25
APP-211ENST00000462267 CC2D1AQ6P1N0 951 aaPredicted RBP16.62■□□□□ 0.25
APP-211ENST00000462267 KIFAP3Q92845 792 aa16.62■□□□□ 0.25
APP-211ENST00000462267 MTMR9Q96QG7 549 aa16.62■□□□□ 0.25
APP-211ENST00000462267 KIF9Q9HAQ2 790 aa16.62■□□□□ 0.25
APP-211ENST00000462267 IL21Q9HBE4 155 aa16.62■□□□□ 0.25
APP-211ENST00000462267 TBX20Q9UMR3 447 aa16.62■□□□□ 0.25
APP-211ENST00000462267 TIMM13Q9Y5L4 95 aaPredicted RBP16.62■□□□□ 0.25
APP-211ENST00000462267 FAM205CA6NFA0 338 aa16.61■□□□□ 0.25
APP-211ENST00000462267 EIF4E1BA6NMX2 242 aaKnown RBP16.61■□□□□ 0.25
APP-211ENST00000462267 MED24O75448 989 aa16.61■□□□□ 0.25
APP-211ENST00000462267 CDKL5O76039 1030 aa16.61■□□□□ 0.25
APP-211ENST00000462267 ZIC2O95409 532 aaPredicted RBP16.61■□□□□ 0.25
APP-211ENST00000462267 SEC24BO95487 1268 aa16.61■□□□□ 0.25
APP-211ENST00000462267 GJA4P35212 333 aa16.61■□□□□ 0.25
APP-211ENST00000462267 AVPR1AP37288 418 aa16.61■□□□□ 0.25
APP-211ENST00000462267 TUFMP49411 452 aaKnown RBP16.61■□□□□ 0.25
APP-211ENST00000462267 BFSP1Q12934 665 aa16.61■□□□□ 0.25
APP-211ENST00000462267 PDGFRLQ15198 375 aa16.61■□□□□ 0.25
APP-211ENST00000462267 ZNF423Q2M1K9 1284 aa16.61■□□□□ 0.25
APP-211ENST00000462267 RASSF3Q86WH2 238 aa16.61■□□□□ 0.25
APP-211ENST00000462267 CHCHD4Q8N4Q1 142 aa16.61■□□□□ 0.25
APP-211ENST00000462267 CNOT6LQ96LI5 555 aaKnown RBP16.61■□□□□ 0.25
APP-211ENST00000462267 TCHPQ9BT92 498 aa16.61■□□□□ 0.25
APP-211ENST00000462267 MRPL4Q9BYD3 311 aaKnown RBP16.61■□□□□ 0.25
APP-211ENST00000462267 GJB4Q9NTQ9 266 aa16.61■□□□□ 0.25
APP-211ENST00000462267 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.61■□□□□ 0.25
APP-211ENST00000462267 PHLPP2Q6ZVD8 1323 aa16.61■□□□□ 0.25
APP-211ENST00000462267 THADAQ6YHU6 1953 aa16.6■□□□□ 0.25
APP-211ENST00000462267 TNFRSF10BO14763 440 aa16.6■□□□□ 0.25
APP-211ENST00000462267 CDC45O75419 566 aa16.6■□□□□ 0.25
APP-211ENST00000462267 SOAT2O75908 522 aa16.6■□□□□ 0.25
APP-211ENST00000462267 ARSAP15289 507 aa16.6■□□□□ 0.25
APP-211ENST00000462267 ENGP17813 658 aa16.6■□□□□ 0.25
APP-211ENST00000462267 BCKDHBP21953 392 aa16.6■□□□□ 0.25
APP-211ENST00000462267 PROZP22891 400 aa16.6■□□□□ 0.25
APP-211ENST00000462267 DPP6P42658 865 aa16.6■□□□□ 0.25
APP-211ENST00000462267 AARSP49588 968 aaKnown RBP eCLIP16.6■□□□□ 0.25
APP-211ENST00000462267 SCAPQ12770 1279 aa16.6■□□□□ 0.25
APP-211ENST00000462267 ARMCX5Q6P1M9 558 aa16.6■□□□□ 0.25
APP-211ENST00000462267 RUFY3Q7L099 469 aa16.6■□□□□ 0.25
APP-211ENST00000462267 RAB44Q7Z6P3 723 aaPredicted RBP16.6■□□□□ 0.25
APP-211ENST00000462267 SYT12Q8IV01 421 aa16.6■□□□□ 0.25
APP-211ENST00000462267 TTC9BQ8N6N2 239 aa16.6■□□□□ 0.25
APP-211ENST00000462267 EZH1Q92800 747 aaPredicted RBP16.6■□□□□ 0.25
APP-211ENST00000462267 USP13Q92995 863 aaPredicted RBP16.6■□□□□ 0.25
APP-211ENST00000462267 CD101Q93033 1021 aa16.6■□□□□ 0.25
APP-211ENST00000462267 TPSD1Q9BZJ3 242 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms