RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 TRIM65Q6PJ69 517 aa12.08□□□□□ -0.48
SSBP1-202ENST00000461433 GBP6Q6ZN66 633 aa12.08□□□□□ -0.48
SSBP1-202ENST00000461433 TMEM86AQ8N2M4 240 aa12.08□□□□□ -0.48
SSBP1-202ENST00000461433 OR10T2Q8NGX3 314 aa12.08□□□□□ -0.48
SSBP1-202ENST00000461433 FAXDC2Q96IV6 333 aa12.08□□□□□ -0.48
SSBP1-202ENST00000461433 NAP1L5Q96NT1 182 aaPredicted RBP12.08□□□□□ -0.48
SSBP1-202ENST00000461433 GAS2L1Q99501 681 aaPredicted RBP12.08□□□□□ -0.48
SSBP1-202ENST00000461433 IMPG2Q9BZV3 1241 aa12.08□□□□□ -0.48
SSBP1-202ENST00000461433 INTS2Q9H0H0 1204 aaKnown RBP12.08□□□□□ -0.48
SSBP1-202ENST00000461433 RBSNQ9H1K0 784 aa12.08□□□□□ -0.48
SSBP1-202ENST00000461433 SIX2Q9NPC8 291 aa12.08□□□□□ -0.48
SSBP1-202ENST00000461433 GCNT4Q9P109 453 aa12.08□□□□□ -0.48
SSBP1-202ENST00000461433 FBXL5Q9UKA1 691 aa12.08□□□□□ -0.48
SSBP1-202ENST00000461433 DSEQ9UL01 958 aa12.08□□□□□ -0.48
SSBP1-202ENST00000461433 EYSQ5T1H1 3165 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 ARHGEF37A1IGU5 675 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 LGALS16A8MUM7 142 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 GOLGA6L19H0YKK7 550 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 H7C4K7 107 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 PER2O15055 1255 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 CLASP2O75122 1294 aaKnown RBP12.07□□□□□ -0.48
SSBP1-202ENST00000461433 WEE2P0C1S8 567 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 IGFBP4P22692 258 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 WARSP23381 471 aaKnown RBP12.07□□□□□ -0.48
SSBP1-202ENST00000461433 LMO2P25791 158 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 GTF2F1P35269 517 aaKnown RBP eCLIP12.07□□□□□ -0.48
SSBP1-202ENST00000461433 CETN1Q12798 172 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 LRMPQ12912 555 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 KCNC3Q14003 757 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 EXOC3L4Q17RC7 722 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 CTXN3Q4LDR2 81 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 TCEAL5Q5H9L2 206 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 WDR44Q5JSH3 913 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 SLC8B1Q6J4K2 584 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 PDXDC1Q6P996 788 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 SCARA5Q6ZMJ2 495 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 ARHGEF19Q8IW93 802 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 ADGRF2Q8IZF7 708 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 ANKRD20A12PQ8NF67 263 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 SPATA18Q8TC71 538 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 TMEM209Q96SK2 561 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 ARID3AQ99856 593 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 NIF3L1Q9GZT8 377 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 NSUN3Q9H649 340 aaKnown RBP12.07□□□□□ -0.48
SSBP1-202ENST00000461433 RTN4Q9NQC3 1192 aaKnown RBP12.07□□□□□ -0.48
SSBP1-202ENST00000461433 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.07□□□□□ -0.48
SSBP1-202ENST00000461433 CDY1Q9Y6F8 540 aa12.07□□□□□ -0.48
SSBP1-202ENST00000461433 MTCL1Q9Y4B5 1905 aaKnown RBP12.07□□□□□ -0.48
SSBP1-202ENST00000461433 A0A1B0GTH6 734 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 TEX33O43247 280 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 OR1D2P34982 312 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 CA8P35219 290 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 FANCCQ00597 558 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 HYAL1Q12794 435 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 BMS1Q14692 1282 aaKnown RBP12.06□□□□□ -0.48
SSBP1-202ENST00000461433 DUSP6Q16828 381 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 ZNF280DQ6N043 979 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 RBM23Q86U06 439 aaKnown RBP12.06□□□□□ -0.48
SSBP1-202ENST00000461433 METTL23Q86XA0 190 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 GLYCTKQ8IVS8 523 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 UBR7Q8N806 425 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 CCDC150Q8NCX0 1101 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 SLC22A17Q8WUG5 538 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 KAT5Q92993 513 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 DDX43Q9NXZ2 648 aaKnown RBP12.06□□□□□ -0.48
SSBP1-202ENST00000461433 STXBP5LQ9Y2K9 1186 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 PES1O00541 588 aaKnown RBP12.06□□□□□ -0.48
SSBP1-202ENST00000461433 OR4Q2P0C623 313 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 P4HA1P13674 534 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 ACAT1P24752 427 aaKnown RBP12.06□□□□□ -0.48
SSBP1-202ENST00000461433 GNL1P36915 607 aaPredicted RBP12.06□□□□□ -0.48
SSBP1-202ENST00000461433 NRIP1P48552 1158 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 LHX1P48742 406 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 NDUFV1P49821 464 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 CLCN4P51793 760 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 TPM4P67936 248 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 RBM10P98175 930 aaKnown RBP12.06□□□□□ -0.48
SSBP1-202ENST00000461433 CREMQ03060 361 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 INCA1Q0VD86 236 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 CUL2Q13617 745 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 RAB33AQ14088 237 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 NR1I3Q14994 352 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 GJB7Q6PEY0 223 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 LILRA6Q6PI73 481 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 LRRTM3Q86VH5 581 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 WHAMMQ8TF30 809 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 KREMEN1Q96MU8 473 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 NT5C1BQ96P26 610 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 PKMYT1Q99640 499 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 ACBD6Q9BR61 282 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 EMILIN2Q9BXX0 1053 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 OXCT2Q9BYC2 517 aaPredicted RBP12.06□□□□□ -0.48
SSBP1-202ENST00000461433 TLE6Q9H808 572 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 CYP3A43Q9HB55 503 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 HMGXB4Q9UGU5 601 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 SIK3Q9Y2K2 1263 aa12.06□□□□□ -0.48
SSBP1-202ENST00000461433 WDR27A2RRH5 827 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 OR6C75A6NL08 312 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 ATP2C2O75185 946 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 NOL4O94818 638 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms