RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 COPAP53621 1224 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 SGSM1Q2NKQ1 1148 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 APOL5Q9BWW9 433 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 STN1Q9H668 368 aaKnown RBP9.38□□□□□ -0.91
BRCA1-205ENST00000461221 APEX2Q9UBZ4 518 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 PTCH1Q13635 1447 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 PLEKHG2Q9H7P9 1386 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 H7C0S8 307 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 TCN1P20061 433 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-205ENST00000461221 GRK2P25098 689 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 KCNJ6P48051 423 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 NDUFA5Q16718 116 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 ZNF772Q68DY9 489 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-205ENST00000461221 NLRP9Q7RTR0 991 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 RIN3Q8TB24 985 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 FAM45AQ8TCE6 357 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 USP13Q92995 863 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-205ENST00000461221 TRIM63Q969Q1 353 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 LRRC1Q9BTT6 524 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 KATNAL1Q9BW62 490 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 GPR63Q9BZJ6 419 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 CAAP1Q9H8G2 361 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 SLC38A7Q9NVC3 462 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 PIN4Q9Y237 131 aaKnown RBP9.38□□□□□ -0.91
BRCA1-205ENST00000461221 NEDD4P46934 1319 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 TADA2AO75478 443 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 IL18RAPO95256 599 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 UBTFL6P0CB48 400 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-205ENST00000461221 PSMC6P62333 389 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 TMEM132DQ14C87 1099 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 SLC18A3Q16572 532 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 FAM83EQ2M2I3 478 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 CCDC149Q6ZUS6 474 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 TRAPPC11Q7Z392 1133 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 C4orf33Q8N1A6 199 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 FLCNQ8NFG4 579 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 SLC35G2Q8TBE7 412 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 WWOXQ9NZC7 414 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 AGAP1Q9UPQ3 857 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 SSU72P8A0A1W2PR75 194 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 RPS7P62081 194 aaKnown RBP9.37□□□□□ -0.91
BRCA1-205ENST00000461221 SFSWAPQ12872 951 aaKnown RBP9.37□□□□□ -0.91
BRCA1-205ENST00000461221 RTL3Q8N8U3 475 aaKnown RBP9.37□□□□□ -0.91
BRCA1-205ENST00000461221 CCDC126Q96EE4 140 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 CAMKK2Q96RR4 588 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 CLEC4MQ9H2X3 399 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-205ENST00000461221 RPRD1BQ9NQG5 326 aaKnown RBP9.37□□□□□ -0.91
BRCA1-205ENST00000461221 HPS4Q9NQG7 708 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 GGT7Q9UJ14 662 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 CLASP1Q7Z460 1538 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 NBPF26B4DH59 902 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 JAK1P23458 1154 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 COG2Q14746 738 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 SF3B3Q15393 1217 aaKnown RBP9.37□□□□□ -0.91
BRCA1-205ENST00000461221 WDR72Q3MJ13 1102 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 SV2CQ496J9 727 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 ZRANB3Q5FWF4 1079 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 TRIM48Q8IWZ4 208 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 CENPLQ8N0S6 344 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-205ENST00000461221 ZNF786Q8N393 782 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 NBPF15Q8N660 670 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 C19orf18Q8NEA5 215 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 GOLPH3Q9H4A6 298 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 TMEM260Q9NX78 707 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 HEG1Q9ULI3 1381 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 ATP10AO60312 1499 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 ENO4A6NNW6 628 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 YWHABP31946 246 aaKnown RBP9.37□□□□□ -0.91
BRCA1-205ENST00000461221 ATXN3P54252 364 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-205ENST00000461221 C11orf88Q6PI97 169 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 LRRC8DQ7L1W4 858 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 CYP4Z2PQ8N1L4 340 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 CENPTQ96BT3 561 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 QTRT2Q9H974 415 aaKnown RBP9.37□□□□□ -0.91
BRCA1-205ENST00000461221 IL1RL2Q9HB29 575 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 CRLS1Q9UJA2 301 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 CHMP2BQ9UQN3 213 aa9.37□□□□□ -0.91
BRCA1-205ENST00000461221 TEX28O15482 410 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 CHRM3P20309 590 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 CHI3L1P36222 383 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 MAGEA4P43358 317 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 TWF1Q12792 350 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 SUGP1Q8IWZ8 645 aaKnown RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 DPP10Q8N608 796 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 RNF149Q8NC42 400 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 ASZ1Q8WWH4 475 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 GLMNQ92990 594 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 ADGRA3Q8IWK6 1321 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 ZNF839A8K0R7 811 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 CASP1P29466 404 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 FNTAP49354 379 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 CSE1LP55060 971 aaKnown RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 CHRNB3Q05901 458 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 PDIA5Q14554 519 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 CHI3L2Q15782 390 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 PCSK7Q16549 785 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 SGO1Q5FBB7 561 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 CLEC4GQ6UXB4 293 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 HS6ST3Q8IZP7 471 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 OR6J1Q8NGC5 347 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms