RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 FAM208BQ5VWN6 2430 aa13.54□□□□□ -0.24
HDAC4-207ENST00000461113 FANCMQ8IYD8 2048 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 FAM170BA6NMN3 283 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 RFPL2O75678 378 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 B3GAT3O94766 335 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 KRT13P13646 458 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 CYP3A5P20815 502 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 NR2F2P24468 414 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 LRRC63Q05C16 580 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 DSC1Q08554 894 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 ADAM9Q13443 819 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 LPAL2Q16609 132 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 NFIL3Q16649 462 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 SKOR2Q2VWA4 1001 aaPredicted RBP13.53□□□□□ -0.24
HDAC4-207ENST00000461113 EDRF1Q3B7T1 1238 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 ZBTB41Q5SVQ8 909 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 KLHL10Q6JEL2 608 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 SASS6Q6UVJ0 657 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 MLKLQ8NB16 471 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 GSTCDQ8NEC7 633 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 GPT2Q8TD30 523 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 SMG7Q92540 1137 aaKnown RBP13.53□□□□□ -0.24
HDAC4-207ENST00000461113 ANKRD36BP1Q96IX9 119 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 PPP1R10Q96QC0 940 aaKnown RBP13.53□□□□□ -0.24
HDAC4-207ENST00000461113 RPP25Q9BUL9 199 aaKnown RBP13.53□□□□□ -0.24
HDAC4-207ENST00000461113 DNAJB4Q9UDY4 337 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 NUB1Q9Y5A7 615 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 CACNA1IQ9P0X4 2223 aa13.53□□□□□ -0.24
HDAC4-207ENST00000461113 ANKRD11Q6UB99 2663 aaPredicted RBP13.53□□□□□ -0.24
HDAC4-207ENST00000461113 ARHGEF37A1IGU5 675 aa13.52□□□□□ -0.25
HDAC4-207ENST00000461113 FAM189A1O60320 539 aa13.52□□□□□ -0.25
HDAC4-207ENST00000461113 LILRB3O75022 631 aa13.52□□□□□ -0.25
HDAC4-207ENST00000461113 TNNC2P02585 160 aa13.52□□□□□ -0.25
HDAC4-207ENST00000461113 ADRB2P07550 413 aa13.52□□□□□ -0.25
HDAC4-207ENST00000461113 TMEM191BP0C7N4 346 aa13.52□□□□□ -0.25
HDAC4-207ENST00000461113 EPB41P11171 864 aaKnown RBP13.52□□□□□ -0.25
HDAC4-207ENST00000461113 TNNI1P19237 187 aa13.52□□□□□ -0.25
HDAC4-207ENST00000461113 PAX3P23760 479 aa13.52□□□□□ -0.25
HDAC4-207ENST00000461113 CCNE1P24864 410 aa13.52□□□□□ -0.25
HDAC4-207ENST00000461113 PMLP29590 882 aa13.52□□□□□ -0.25
HDAC4-207ENST00000461113 PSMC2P35998 433 aaKnown RBP13.52□□□□□ -0.25
HDAC4-207ENST00000461113 TFAMQ00059 246 aaKnown RBP13.52□□□□□ -0.25
HDAC4-207ENST00000461113 FKBP3Q00688 224 aaKnown RBP13.52□□□□□ -0.25
HDAC4-207ENST00000461113 JADE1Q6IE81 842 aa13.52□□□□□ -0.25
HDAC4-207ENST00000461113 CYP26C1Q6V0L0 522 aa13.52□□□□□ -0.25
HDAC4-207ENST00000461113 GET4Q7L5D6 327 aaPredicted RBP13.52□□□□□ -0.25
HDAC4-207ENST00000461113 DDX23Q9BUQ8 820 aaKnown RBP13.52□□□□□ -0.25
HDAC4-207ENST00000461113 RHOBTB2Q9BYZ6 727 aa13.52□□□□□ -0.25
HDAC4-207ENST00000461113 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.52□□□□□ -0.25
HDAC4-207ENST00000461113 SF3B1O75533 1304 aaKnown RBP eCLIP13.51□□□□□ -0.25
HDAC4-207ENST00000461113 PODXLO00592 558 aa13.51□□□□□ -0.25
HDAC4-207ENST00000461113 C2CD2LO14523 706 aa13.51□□□□□ -0.25
HDAC4-207ENST00000461113 LETM1O95202 739 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-207ENST00000461113 DLATP10515 647 aaKnown RBP13.51□□□□□ -0.25
HDAC4-207ENST00000461113 CD72P21854 359 aa13.51□□□□□ -0.25
HDAC4-207ENST00000461113 AP3M2P53677 418 aa13.51□□□□□ -0.25
HDAC4-207ENST00000461113 SPAG1Q07617 926 aa13.51□□□□□ -0.25
HDAC4-207ENST00000461113 PAK1Q13153 545 aa13.51□□□□□ -0.25
HDAC4-207ENST00000461113 MLF2Q15773 248 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-207ENST00000461113 TPD52L1Q16890 204 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-207ENST00000461113 DUOXA2Q1HG44 320 aa13.51□□□□□ -0.25
HDAC4-207ENST00000461113 SLC44A4Q53GD3 710 aa13.51□□□□□ -0.25
HDAC4-207ENST00000461113 N4BP2L1Q5TBK1 243 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-207ENST00000461113 SPATA1Q5VX52 437 aa13.51□□□□□ -0.25
HDAC4-207ENST00000461113 CENPPQ6IPU0 288 aa13.51□□□□□ -0.25
HDAC4-207ENST00000461113 CRELD2Q6UXH1 353 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-207ENST00000461113 CBWD2Q8IUF1 395 aa13.51□□□□□ -0.25
HDAC4-207ENST00000461113 TMEM174Q8WUU8 243 aa13.51□□□□□ -0.25
HDAC4-207ENST00000461113 NELFBQ8WX92 580 aa13.51□□□□□ -0.25
HDAC4-207ENST00000461113 CCDC127Q96BQ5 260 aa13.51□□□□□ -0.25
HDAC4-207ENST00000461113 ZNF707Q96C28 371 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-207ENST00000461113 ZMAT2Q96NC0 199 aaKnown RBP13.51□□□□□ -0.25
HDAC4-207ENST00000461113 OSBPL6Q9BZF3 934 aa13.51□□□□□ -0.25
HDAC4-207ENST00000461113 PIDD1Q9HB75 910 aa13.51□□□□□ -0.25
HDAC4-207ENST00000461113 MRPL17Q9NRX2 175 aaKnown RBP13.51□□□□□ -0.25
HDAC4-207ENST00000461113 DMAC2Q9NW81 257 aa13.51□□□□□ -0.25
HDAC4-207ENST00000461113 DPP3Q9NY33 737 aa13.51□□□□□ -0.25
HDAC4-207ENST00000461113 ADAM28Q9UKQ2 775 aa13.51□□□□□ -0.25
HDAC4-207ENST00000461113 RAB23Q9ULC3 237 aa13.51□□□□□ -0.25
HDAC4-207ENST00000461113 MAPK13O15264 365 aa13.5□□□□□ -0.25
HDAC4-207ENST00000461113 GDF9O60383 454 aa13.5□□□□□ -0.25
HDAC4-207ENST00000461113 STX10O60499 249 aa13.5□□□□□ -0.25
HDAC4-207ENST00000461113 B4GALT3O60512 393 aa13.5□□□□□ -0.25
HDAC4-207ENST00000461113 PHACTR2O75167 634 aa13.5□□□□□ -0.25
HDAC4-207ENST00000461113 CLSTN1O94985 981 aa13.5□□□□□ -0.25
HDAC4-207ENST00000461113 URODP06132 367 aa13.5□□□□□ -0.25
HDAC4-207ENST00000461113 PROS1P07225 676 aa13.5□□□□□ -0.25
HDAC4-207ENST00000461113 NFICP08651 508 aa13.5□□□□□ -0.25
HDAC4-207ENST00000461113 SPATA31D3P0C874 917 aa13.5□□□□□ -0.25
HDAC4-207ENST00000461113 LRPAP1P30533 357 aa13.5□□□□□ -0.25
HDAC4-207ENST00000461113 MAGEA9P43362 315 aa13.5□□□□□ -0.25
HDAC4-207ENST00000461113 CLCNKBP51801 687 aa13.5□□□□□ -0.25
HDAC4-207ENST00000461113 NLRP12P59046 1061 aa13.5□□□□□ -0.25
HDAC4-207ENST00000461113 PRKCQQ04759 706 aa13.5□□□□□ -0.25
HDAC4-207ENST00000461113 CYP24A1Q07973 514 aa13.5□□□□□ -0.25
HDAC4-207ENST00000461113 PSMD6Q15008 389 aa13.5□□□□□ -0.25
HDAC4-207ENST00000461113 USP41Q3LFD5 358 aa13.5□□□□□ -0.25
HDAC4-207ENST00000461113 CT47A1Q5JQC4 288 aaPredicted RBP13.5□□□□□ -0.25
HDAC4-207ENST00000461113 PDXDC1Q6P996 788 aa13.5□□□□□ -0.25
HDAC4-207ENST00000461113 ELMSAN1Q6PJG2 1045 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms