RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 TRIM49P0CI25 452 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 TRIM49CP0CI26 452 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 HOXB8P17481 243 aaPredicted RBP11.89□□□□□ -0.51
APTX-209ENST00000460940 NCOA4Q13772 614 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 RAB33AQ14088 237 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 STX1AQ16623 288 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 AAK1Q2M2I8 961 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 CTXN3Q4LDR2 81 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 OVOS1Q6IE37 1185 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 C15orf39Q6ZRI6 1047 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 SV2AQ7L0J3 742 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 TMEM86AQ8N2M4 240 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 TOP6BLQ8N6T0 577 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 CCDC112Q8NEF3 446 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 TAF4BQ92750 862 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 EEF2KMTQ96G04 330 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 CLSTN3Q9BQT9 956 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 FUCA2Q9BTY2 467 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 TMEM8AQ9HCN3 771 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 ANO10Q9NW15 660 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 GEMIN8Q9NWZ8 242 aaKnown RBP11.89□□□□□ -0.51
APTX-209ENST00000460940 SCN1AP35498 2009 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 LINC01565O15544 149 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 HUS1O60921 280 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 RPL17P18621 184 aaKnown RBP11.89□□□□□ -0.51
APTX-209ENST00000460940 MARSP56192 900 aaKnown RBP11.89□□□□□ -0.51
APTX-209ENST00000460940 CCDC40Q4G0X9 1142 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 LLGL2Q6P1M3 1020 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 DPH6Q7L8W6 267 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 ATXN2LQ8WWM7 1075 aaKnown RBP11.89□□□□□ -0.51
APTX-209ENST00000460940 FBXL5Q9UKA1 691 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 MAFFQ9ULX9 164 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 CDY1Q9Y6F8 540 aa11.89□□□□□ -0.51
APTX-209ENST00000460940 TSC2P49815 1807 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 CCDC192P0DO97 292 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 KCNA5P22460 613 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 OR1D2P34982 312 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 LTBRP36941 435 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 PIK3CAP42336 1068 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 GCLMP48507 274 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 MXI1P50539 228 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 TNNC1P63316 161 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 PPP3CAQ08209 521 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 ZNF699Q32M78 642 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 PUS10Q3MIT2 529 aaKnown RBP11.88□□□□□ -0.51
APTX-209ENST00000460940 LEXMQ3ZCV2 418 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 DCAF17Q5H9S7 520 aaPredicted RBP11.88□□□□□ -0.51
APTX-209ENST00000460940 KRT39Q6A163 491 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 ANKRD54Q6NXT1 300 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 EP400NLQ6ZTU2 488 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 RTL10Q7L3V2 364 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 LIMS2Q7Z4I7 341 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 SRRTQ9BXP5 876 aaKnown RBP11.88□□□□□ -0.51
APTX-209ENST00000460940 IMPG2Q9BZV3 1241 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 XYLT2Q9H1B5 865 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 PLEKHA4Q9H4M7 779 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 SFXN1Q9H9B4 322 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 CLEC1BQ9P126 229 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 FBXW11Q9UKB1 542 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 BARX2Q9UMQ3 279 aaPredicted RBP11.88□□□□□ -0.51
APTX-209ENST00000460940 SNX9Q9Y5X1 595 aa11.88□□□□□ -0.51
APTX-209ENST00000460940 TGM5O43548 720 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 N4BP1O75113 896 aaKnown RBP11.87□□□□□ -0.51
APTX-209ENST00000460940 VNN1O95497 513 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 CST3P01034 146 aaPredicted RBP11.87□□□□□ -0.51
APTX-209ENST00000460940 FAM163BP0C2L3 166 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 P4HA1P13674 534 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 EPCAMP16422 314 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 MYL6P60660 151 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 ROR1Q01973 937 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 TPD52L1Q16890 204 aaPredicted RBP11.87□□□□□ -0.51
APTX-209ENST00000460940 SGSM1Q2NKQ1 1148 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 TCERG1LQ5VWI1 586 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 WSCD1Q658N2 575 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 TPGS2Q68CL5 300 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 LILRA6Q6PI73 481 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 FAM114A1Q8IWE2 563 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 THEM5Q8N1Q8 247 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 CCDC150Q8NCX0 1101 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 SLC35C1Q96A29 364 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 MSLNLQ96KJ4 702 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 THAP9Q9H5L6 903 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 MAN1C1Q9NR34 630 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 CD207Q9UJ71 328 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 L1RE1Q9UN81 338 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 TIMM13Q9Y5L4 95 aaPredicted RBP11.87□□□□□ -0.51
APTX-209ENST00000460940 SPTBN5Q9NRC6 3674 aaKnown RBP11.87□□□□□ -0.51
APTX-209ENST00000460940 COL6A3P12111 3177 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 PMM2O15305 246 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 ADAM12O43184 909 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 ASS1P00966 412 aaKnown RBP11.87□□□□□ -0.51
APTX-209ENST00000460940 HLA-DRAP01903 254 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 LHX1P48742 406 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 MRPS5P82675 430 aaKnown RBP11.87□□□□□ -0.51
APTX-209ENST00000460940 SMAD4Q13485 552 aaKnown RBP11.87□□□□□ -0.51
APTX-209ENST00000460940 ZNF667Q5HYK9 610 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 LIN9Q5TKA1 542 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 RSPO2Q6UXX9 243 aaPredicted RBP11.87□□□□□ -0.51
APTX-209ENST00000460940 PALB2Q86YC2 1186 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 GLYCTKQ8IVS8 523 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms