RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 NELL2Q99435 816 aa3.52□□□□□ -1.85
SYPL1-203ENST00000460770 SLC5A4Q9NY91 659 aa3.52□□□□□ -1.85
SYPL1-203ENST00000460770 TBC1D30Q9Y2I9 924 aa3.52□□□□□ -1.85
SYPL1-203ENST00000460770 PCDHA13Q9Y5I0 950 aa3.52□□□□□ -1.85
SYPL1-203ENST00000460770 ADGRA2Q96PE1 1338 aa3.51□□□□□ -1.85
SYPL1-203ENST00000460770 SBK3P0C264 359 aa3.51□□□□□ -1.85
SYPL1-203ENST00000460770 FAM163BP0C2L3 166 aa3.51□□□□□ -1.85
SYPL1-203ENST00000460770 PRR35P0CG20 571 aa3.51□□□□□ -1.85
SYPL1-203ENST00000460770 DRD4P21917 467 aa3.51□□□□□ -1.85
SYPL1-203ENST00000460770 CD6P30203 668 aa3.51□□□□□ -1.85
SYPL1-203ENST00000460770 ZNF280AP59817 542 aaPredicted RBP3.51□□□□□ -1.85
SYPL1-203ENST00000460770 MC2RQ01718 297 aa3.51□□□□□ -1.85
SYPL1-203ENST00000460770 TLE1Q04724 770 aa3.51□□□□□ -1.85
SYPL1-203ENST00000460770 GTF2H3Q13889 308 aa3.51□□□□□ -1.85
SYPL1-203ENST00000460770 CCDC93Q567U6 631 aa3.51□□□□□ -1.85
SYPL1-203ENST00000460770 ZNF618Q5T7W0 954 aa3.51□□□□□ -1.85
SYPL1-203ENST00000460770 THEMIS2Q5TEJ8 643 aa3.51□□□□□ -1.85
SYPL1-203ENST00000460770 SLC9A4Q6AI14 798 aa3.51□□□□□ -1.85
SYPL1-203ENST00000460770 TMPRSS9Q7Z410 1059 aa3.51□□□□□ -1.85
SYPL1-203ENST00000460770 C9orf106Q8NAJ2 232 aa3.51□□□□□ -1.85
SYPL1-203ENST00000460770 NSUN7Q8NE18 718 aaKnown RBP3.51□□□□□ -1.85
SYPL1-203ENST00000460770 DENND1AQ8TEH3 1009 aa3.51□□□□□ -1.85
SYPL1-203ENST00000460770 DDX17Q92841 729 aaKnown RBP3.51□□□□□ -1.85
SYPL1-203ENST00000460770 ACTRT3Q9BYD9 372 aa3.51□□□□□ -1.85
SYPL1-203ENST00000460770 BHMT2Q9H2M3 363 aa3.51□□□□□ -1.85
SYPL1-203ENST00000460770 SERTAD4Q9NUC0 356 aa3.51□□□□□ -1.85
SYPL1-203ENST00000460770 POLHQ9Y253 713 aa3.51□□□□□ -1.85
SYPL1-203ENST00000460770 ARHGEF17Q96PE2 2063 aaPredicted RBP3.51□□□□□ -1.85
SYPL1-203ENST00000460770 QSOX1O00391 747 aa3.5□□□□□ -1.85
SYPL1-203ENST00000460770 XPOTO43592 962 aaKnown RBP3.5□□□□□ -1.85
SYPL1-203ENST00000460770 GNAI2P04899 355 aa3.5□□□□□ -1.85
SYPL1-203ENST00000460770 GJB1P08034 283 aa3.5□□□□□ -1.85
SYPL1-203ENST00000460770 HOXB6P17509 224 aaKnown RBP3.5□□□□□ -1.85
SYPL1-203ENST00000460770 CCT4P50991 539 aaKnown RBP3.5□□□□□ -1.85
SYPL1-203ENST00000460770 KRT85P78386 507 aa3.5□□□□□ -1.85
SYPL1-203ENST00000460770 TBCCQ15814 346 aa3.5□□□□□ -1.85
SYPL1-203ENST00000460770 ZNF626Q68DY1 528 aa3.5□□□□□ -1.85
SYPL1-203ENST00000460770 SFRP4Q6FHJ7 346 aaPredicted RBP3.5□□□□□ -1.85
SYPL1-203ENST00000460770 ANKRD16Q6P6B7 361 aa3.5□□□□□ -1.85
SYPL1-203ENST00000460770 LHFPL2Q6ZUX7 228 aa3.5□□□□□ -1.85
SYPL1-203ENST00000460770 WDR53Q7Z5U6 358 aaPredicted RBP3.5□□□□□ -1.85
SYPL1-203ENST00000460770 NEK8Q86SG6 692 aa3.5□□□□□ -1.85
SYPL1-203ENST00000460770 CNTD1Q8N815 330 aa3.5□□□□□ -1.85
SYPL1-203ENST00000460770 FANCBQ8NB91 859 aa3.5□□□□□ -1.85
SYPL1-203ENST00000460770 RAB24Q969Q5 203 aa3.5□□□□□ -1.85
SYPL1-203ENST00000460770 FAM136AQ96C01 138 aa3.5□□□□□ -1.85
SYPL1-203ENST00000460770 MRGPRX4Q96LA9 322 aa3.5□□□□□ -1.85
SYPL1-203ENST00000460770 ARHGEF3Q9NR81 526 aa3.5□□□□□ -1.85
SYPL1-203ENST00000460770 ADAM21Q9UKJ8 722 aa3.5□□□□□ -1.85
SYPL1-203ENST00000460770 RAD54BQ9Y620 910 aa3.5□□□□□ -1.85
SYPL1-203ENST00000460770 PHLDB1Q86UU1 1377 aa3.5□□□□□ -1.85
SYPL1-203ENST00000460770 CCDC154A6NI56 674 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 ZNF785A8K8V0 405 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 HTRA2O43464 458 aaPredicted RBP3.49□□□□□ -1.85
SYPL1-203ENST00000460770 TLR5O60602 858 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 DTNBO60941 627 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 ONECUT2O95948 504 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 IGKV2-30P06310 120 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 ELFN1P0C7U0 828 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 RARBP10826 455 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 MALP21145 153 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 EPHB2P29323 1055 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 SSBP2P81877 361 aaPredicted RBP3.49□□□□□ -1.85
SYPL1-203ENST00000460770 SATB1Q01826 763 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 KIF23Q02241 960 aaPredicted RBP3.49□□□□□ -1.85
SYPL1-203ENST00000460770 TMEM119Q4V9L6 283 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 FLYWCH1Q4VC44 716 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 AARS2Q5JTZ9 985 aaKnown RBP3.49□□□□□ -1.85
SYPL1-203ENST00000460770 RBM20Q5T481 1227 aaKnown RBP3.49□□□□□ -1.85
SYPL1-203ENST00000460770 SLC4A10Q6U841 1118 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 SLC30A10Q6XR72 485 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 JADE3Q92613 823 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 RFKQ969G6 155 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 SH3BP4Q9P0V3 963 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 SLC45A2Q9UMX9 530 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 SH2B3Q9UQQ2 575 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 BTBD3Q9Y2F9 522 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 IPPQ9Y573 584 aa3.49□□□□□ -1.85
SYPL1-203ENST00000460770 ZNF521Q96K83 1311 aa3.48□□□□□ -1.85
SYPL1-203ENST00000460770 VWC2LB2RUY7 222 aa3.48□□□□□ -1.85
SYPL1-203ENST00000460770 PPP6CO00743 305 aa3.48□□□□□ -1.85
SYPL1-203ENST00000460770 SLC16A6O15403 523 aa3.48□□□□□ -1.85
SYPL1-203ENST00000460770 RHOP08100 348 aa3.48□□□□□ -1.85
SYPL1-203ENST00000460770 C5AR1P21730 350 aa3.48□□□□□ -1.85
SYPL1-203ENST00000460770 PIK3CGP48736 1102 aa3.48□□□□□ -1.85
SYPL1-203ENST00000460770 HNRNPMP52272 730 aaKnown RBP eCLIP3.48□□□□□ -1.85
SYPL1-203ENST00000460770 ZNF135P52742 658 aaPredicted RBP3.48□□□□□ -1.85
SYPL1-203ENST00000460770 PSMC1P62191 440 aaKnown RBP3.48□□□□□ -1.85
SYPL1-203ENST00000460770 HABP2Q14520 560 aaPredicted RBP3.48□□□□□ -1.85
SYPL1-203ENST00000460770 UAP1L1Q3KQV9 507 aa3.48□□□□□ -1.85
SYPL1-203ENST00000460770 C11orf87Q6NUJ2 197 aa3.48□□□□□ -1.85
SYPL1-203ENST00000460770 C3orf20Q8ND61 904 aa3.48□□□□□ -1.85
SYPL1-203ENST00000460770 PSD4Q8NDX1 1056 aa3.48□□□□□ -1.85
SYPL1-203ENST00000460770 C1orf162Q8NEQ5 155 aaPredicted RBP3.48□□□□□ -1.85
SYPL1-203ENST00000460770 NSUN6Q8TEA1 469 aaKnown RBP3.48□□□□□ -1.85
SYPL1-203ENST00000460770 FAXDC2Q96IV6 333 aa3.48□□□□□ -1.85
SYPL1-203ENST00000460770 AMBRA1Q9C0C7 1298 aa3.48□□□□□ -1.85
SYPL1-203ENST00000460770 WDCPQ9H6R7 721 aa3.48□□□□□ -1.85
SYPL1-203ENST00000460770 GPR35Q9HC97 309 aa3.48□□□□□ -1.85
SYPL1-203ENST00000460770 VSX1Q9NZR4 365 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms