RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 NHLH1Q02575 133 aa23.37■■□□□ 1.33
SSNA1-202ENST00000459860 PPM1LQ5SGD2 360 aa23.37■■□□□ 1.33
SSNA1-202ENST00000459860 TMEM86AQ8N2M4 240 aa23.37■■□□□ 1.33
SSNA1-202ENST00000459860 NELFBQ8WX92 580 aa23.37■■□□□ 1.33
SSNA1-202ENST00000459860 BORCS6Q96GS4 357 aa23.37■■□□□ 1.33
SSNA1-202ENST00000459860 GZF1Q9H116 711 aaPredicted RBP23.37■■□□□ 1.33
SSNA1-202ENST00000459860 PIDD1Q9HB75 910 aa23.37■■□□□ 1.33
SSNA1-202ENST00000459860 CTNND2Q9UQB3 1225 aa23.37■■□□□ 1.33
SSNA1-202ENST00000459860 PIEZO1Q92508 2521 aa23.37■■□□□ 1.33
SSNA1-202ENST00000459860 WDFY4Q6ZS81 3184 aa23.36■■□□□ 1.33
SSNA1-202ENST00000459860 TRIM49BA6NDI0 452 aa23.36■■□□□ 1.33
SSNA1-202ENST00000459860 PRRG1O14668 218 aa23.36■■□□□ 1.33
SSNA1-202ENST00000459860 MBD3O95983 291 aa23.36■■□□□ 1.33
SSNA1-202ENST00000459860 CD44P16070 742 aaKnown RBP23.36■■□□□ 1.33
SSNA1-202ENST00000459860 BMP6P22004 513 aa23.36■■□□□ 1.33
SSNA1-202ENST00000459860 ATICP31939 592 aa23.36■■□□□ 1.33
SSNA1-202ENST00000459860 WSCD1Q658N2 575 aa23.36■■□□□ 1.33
SSNA1-202ENST00000459860 RTL10Q7L3V2 364 aa23.36■■□□□ 1.33
SSNA1-202ENST00000459860 BMP8AQ7Z5Y6 402 aa23.36■■□□□ 1.33
SSNA1-202ENST00000459860 GPR149Q86SP6 731 aa23.36■■□□□ 1.33
SSNA1-202ENST00000459860 TOP6BLQ8N6T0 577 aa23.36■■□□□ 1.33
SSNA1-202ENST00000459860 SLC7A14Q8TBB6 771 aa23.36■■□□□ 1.33
SSNA1-202ENST00000459860 ZNF516Q92618 1163 aa23.36■■□□□ 1.33
SSNA1-202ENST00000459860 SYAP1Q96A49 352 aaPredicted RBP23.36■■□□□ 1.33
SSNA1-202ENST00000459860 PPP1R3GB7ZBB8 358 aa23.35■■□□□ 1.33
SSNA1-202ENST00000459860 STX10O60499 249 aa23.35■■□□□ 1.33
SSNA1-202ENST00000459860 RFPL2O75678 378 aa23.35■■□□□ 1.33
SSNA1-202ENST00000459860 ABLIM3O94929 683 aa23.35■■□□□ 1.33
SSNA1-202ENST00000459860 HNRNPA1P09651 372 aaKnown RBP eCLIP23.35■■□□□ 1.33
SSNA1-202ENST00000459860 ATF2P15336 505 aa23.35■■□□□ 1.33
SSNA1-202ENST00000459860 PMS1P54277 932 aaKnown RBP23.35■■□□□ 1.33
SSNA1-202ENST00000459860 TNNC1P63316 161 aa23.35■■□□□ 1.33
SSNA1-202ENST00000459860 DLG4P78352 724 aa23.35■■□□□ 1.33
SSNA1-202ENST00000459860 MYL7Q01449 175 aa23.35■■□□□ 1.33
SSNA1-202ENST00000459860 PAK1Q13153 545 aa23.35■■□□□ 1.33
SSNA1-202ENST00000459860 UVSSAQ2YD98 709 aa23.35■■□□□ 1.33
SSNA1-202ENST00000459860 TDRD10Q5VZ19 366 aaKnown RBP23.35■■□□□ 1.33
SSNA1-202ENST00000459860 SPATA18Q8TC71 538 aa23.35■■□□□ 1.33
SSNA1-202ENST00000459860 SMG7Q92540 1137 aaKnown RBP23.35■■□□□ 1.33
SSNA1-202ENST00000459860 EEF2KMTQ96G04 330 aa23.35■■□□□ 1.33
SSNA1-202ENST00000459860 PHF7Q9BWX1 381 aaPredicted RBP23.35■■□□□ 1.33
SSNA1-202ENST00000459860 CYP4F11Q9HBI6 524 aa23.35■■□□□ 1.33
SSNA1-202ENST00000459860 AFF4Q9UHB7 1163 aaKnown RBP23.35■■□□□ 1.33
SSNA1-202ENST00000459860 MAFFQ9ULX9 164 aa23.35■■□□□ 1.33
SSNA1-202ENST00000459860 L1RE1Q9UN81 338 aa23.35■■□□□ 1.33
SSNA1-202ENST00000459860 DENND4AQ7Z401 1863 aa23.34■■□□□ 1.33
SSNA1-202ENST00000459860 XYLBO75191 536 aa23.34■■□□□ 1.33
SSNA1-202ENST00000459860 STAU1O95793 577 aaKnown RBP23.34■■□□□ 1.33
SSNA1-202ENST00000459860 CST3P01034 146 aaPredicted RBP23.34■■□□□ 1.33
SSNA1-202ENST00000459860 TRIM49P0CI25 452 aa23.34■■□□□ 1.33
SSNA1-202ENST00000459860 TRIM49CP0CI26 452 aa23.34■■□□□ 1.33
SSNA1-202ENST00000459860 HOXA9P31269 272 aa23.34■■□□□ 1.33
SSNA1-202ENST00000459860 NCOA4Q13772 614 aa23.34■■□□□ 1.33
SSNA1-202ENST00000459860 FOXR2Q6PJQ5 311 aa23.34■■□□□ 1.33
SSNA1-202ENST00000459860 TRIM67Q6ZTA4 783 aa23.34■■□□□ 1.33
SSNA1-202ENST00000459860 DPH6Q7L8W6 267 aa23.34■■□□□ 1.33
SSNA1-202ENST00000459860 ZC3H3Q8IXZ2 948 aaKnown RBP23.34■■□□□ 1.33
SSNA1-202ENST00000459860 ADGRF2Q8IZF7 708 aa23.34■■□□□ 1.33
SSNA1-202ENST00000459860 PDCL2Q8N4E4 241 aa23.34■■□□□ 1.33
SSNA1-202ENST00000459860 CEP63Q96MT8 703 aa23.34■■□□□ 1.33
SSNA1-202ENST00000459860 MMS19Q96T76 1030 aa23.34■■□□□ 1.33
SSNA1-202ENST00000459860 RHOBTB2Q9BYZ6 727 aa23.34■■□□□ 1.33
SSNA1-202ENST00000459860 PRKD2Q9BZL6 878 aa23.34■■□□□ 1.33
SSNA1-202ENST00000459860 LRG1P02750 347 aa23.33■■□□□ 1.33
SSNA1-202ENST00000459860 C4BPAP04003 597 aaKnown RBP23.33■■□□□ 1.33
SSNA1-202ENST00000459860 WEE2P0C1S8 567 aa23.33■■□□□ 1.33
SSNA1-202ENST00000459860 PIK3CAP42336 1068 aa23.33■■□□□ 1.33
SSNA1-202ENST00000459860 MYL6P60660 151 aa23.33■■□□□ 1.33
SSNA1-202ENST00000459860 ZXDAP98168 799 aa23.33■■□□□ 1.33
SSNA1-202ENST00000459860 TSPY1Q01534 308 aa23.33■■□□□ 1.33
SSNA1-202ENST00000459860 ADCY1Q08828 1119 aa23.33■■□□□ 1.33
SSNA1-202ENST00000459860 GPR17Q13304 367 aa23.33■■□□□ 1.33
SSNA1-202ENST00000459860 ZNF699Q32M78 642 aa23.33■■□□□ 1.33
SSNA1-202ENST00000459860 WDR72Q3MJ13 1102 aa23.33■■□□□ 1.33
SSNA1-202ENST00000459860 ZACNQ401N2 412 aa23.33■■□□□ 1.33
SSNA1-202ENST00000459860 TCERG1LQ5VWI1 586 aa23.33■■□□□ 1.33
SSNA1-202ENST00000459860 GPT2Q8TD30 523 aa23.33■■□□□ 1.33
SSNA1-202ENST00000459860 IMPG2Q9BZV3 1241 aa23.33■■□□□ 1.33
SSNA1-202ENST00000459860 MMRN2Q9H8L6 949 aa23.33■■□□□ 1.33
SSNA1-202ENST00000459860 OR4Q2P0C623 313 aa23.32■■□□□ 1.32
SSNA1-202ENST00000459860 P4HA1P13674 534 aa23.32■■□□□ 1.32
SSNA1-202ENST00000459860 LHX1P48742 406 aa23.32■■□□□ 1.32
SSNA1-202ENST00000459860 DCAF17Q5H9S7 520 aaPredicted RBP23.32■■□□□ 1.32
SSNA1-202ENST00000459860 SCARA3Q6AZY7 606 aa23.32■■□□□ 1.32
SSNA1-202ENST00000459860 TTI2Q6NXR4 508 aa23.32■■□□□ 1.32
SSNA1-202ENST00000459860 RNF19BQ6ZMZ0 732 aa23.32■■□□□ 1.32
SSNA1-202ENST00000459860 SV2AQ7L0J3 742 aa23.32■■□□□ 1.32
SSNA1-202ENST00000459860 TCEAL8Q8IYN2 117 aa23.32■■□□□ 1.32
SSNA1-202ENST00000459860 DCP1BQ8IZD4 617 aaKnown RBP23.32■■□□□ 1.32
SSNA1-202ENST00000459860 MLKLQ8NB16 471 aa23.32■■□□□ 1.32
SSNA1-202ENST00000459860 OR10T2Q8NGX3 314 aa23.32■■□□□ 1.32
SSNA1-202ENST00000459860 POMKQ9H5K3 350 aa23.32■■□□□ 1.32
SSNA1-202ENST00000459860 METTL14Q9HCE5 456 aaKnown RBP23.32■■□□□ 1.32
SSNA1-202ENST00000459860 DDX43Q9NXZ2 648 aaKnown RBP23.32■■□□□ 1.32
SSNA1-202ENST00000459860 ARMCX3Q9UH62 379 aaPredicted RBP23.32■■□□□ 1.32
SSNA1-202ENST00000459860 DACH1Q9UI36 760 aa23.32■■□□□ 1.32
SSNA1-202ENST00000459860 CDH22Q9UJ99 828 aa23.32■■□□□ 1.32
SSNA1-202ENST00000459860 POLIQ9UNA4 740 aa23.32■■□□□ 1.32
SSNA1-202ENST00000459860 NR2E1Q9Y466 385 aa23.32■■□□□ 1.32
SSNA1-202ENST00000459860 TMEM221A6NGB7 291 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms