RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 EFL1Q7Z2Z2 1120 aaKnown RBP10.22□□□□□ -0.77
UFD1-205ENST00000459854 SH2D3CQ8N5H7 860 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 ZNF784Q8NCA9 323 aaPredicted RBP10.22□□□□□ -0.77
UFD1-205ENST00000459854 TMEM35BQ8NCS4 154 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 KCNB2Q92953 911 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 GTSE1Q9NYZ3 720 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 TUBE1Q9UJT0 475 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 ANAPC7Q9UJX3 599 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 ROBO3Q96MS0 1386 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 ANGPT2O15123 496 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 CBFA2T3O75081 653 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 PTPN4P29074 926 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 APLP1P51693 650 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 LAMC2Q13753 1193 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 TKFCQ3LXA3 575 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 ARL13BQ3SXY8 428 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 KLHL23Q8NBE8 558 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 WNK4Q96J92 1243 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 THTPAQ9BU02 230 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 NEUROG2Q9H2A3 272 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 G3BP2Q9UN86 482 aaKnown RBP10.22□□□□□ -0.77
UFD1-205ENST00000459854 PCDHB6Q9Y5E3 794 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 S100A1P23297 94 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 MLH1P40692 756 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 NOL9Q5SY16 702 aaKnown RBP10.22□□□□□ -0.77
UFD1-205ENST00000459854 FRMD5Q7Z6J6 570 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 CCNYQ8ND76 341 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 ACER1Q8TDN7 264 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 IGDCC4Q8TDY8 1250 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 GMCL1Q96IK5 515 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 MED10Q9BTT4 135 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 NDEL1Q9GZM8 345 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.22□□□□□ -0.77
UFD1-205ENST00000459854 CTNNAL1Q9UBT7 734 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 TMEM120BA0PK00 339 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 TLR3O15455 904 aaKnown RBP10.22□□□□□ -0.77
UFD1-205ENST00000459854 LRRN2O75325 713 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 LARGE1O95461 756 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 FCGR1AP12314 374 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 MYCLP12524 364 aaPredicted RBP10.22□□□□□ -0.77
UFD1-205ENST00000459854 ADARP55265 1226 aaKnown RBP10.22□□□□□ -0.77
UFD1-205ENST00000459854 CENPCQ03188 943 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 KDSRQ06136 332 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 CAPRIN1Q14444 709 aaKnown RBP10.22□□□□□ -0.77
UFD1-205ENST00000459854 ARMCX4Q5H9R4 360 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 FAM160B1Q5W0V3 765 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 HDDC2Q7Z4H3 204 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 ERICH1Q86X53 443 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 PASD1Q8IV76 773 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 ZBED8Q8IZ13 594 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 ST13P5Q8NFI4 369 aaPredicted RBP10.22□□□□□ -0.77
UFD1-205ENST00000459854 USP33Q8TEY7 942 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 KCND1Q9NSA2 647 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 DCDC2Q9UHG0 476 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 RAB21Q9UL25 225 aa10.22□□□□□ -0.77
UFD1-205ENST00000459854 CORO1CQ9ULV4 474 aaPredicted RBP10.22□□□□□ -0.77
UFD1-205ENST00000459854 ABCB11O95342 1321 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 HNRNPDLO14979 420 aaKnown RBP10.21□□□□□ -0.77
UFD1-205ENST00000459854 ZBTB5O15062 677 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 AKAP10O43572 662 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 TNFAIP8O95379 198 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 DLGAP3O95886 979 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 STAT3P40763 770 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 COPAP53621 1224 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 KRT17Q04695 432 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 CNGA2Q16280 664 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 PPM1NQ8N819 430 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 WDR60Q8WVS4 1066 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 OMA1Q96E52 524 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 OTUB1Q96FW1 271 aaPredicted RBP10.21□□□□□ -0.77
UFD1-205ENST00000459854 ADAM22Q9P0K1 906 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 COPG2Q9UBF2 871 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 SLC12A6Q9UHW9 1150 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 SLC16A3O15427 465 aaKnown RBP10.21□□□□□ -0.77
UFD1-205ENST00000459854 LZTS3O60299 673 aaPredicted RBP10.21□□□□□ -0.77
UFD1-205ENST00000459854 HLA-DPA1P20036 260 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 TBXAS1P24557 533 aaPredicted RBP10.21□□□□□ -0.77
UFD1-205ENST00000459854 ITPRIPL1Q6GPH6 555 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 PPP1R18Q6NYC8 613 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 SH3BP5LQ7L8J4 393 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 CATSPER3Q86XQ3 398 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 CLEC10AQ8IUN9 316 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 EIF1ADQ8N9N8 165 aaKnown RBP10.21□□□□□ -0.77
UFD1-205ENST00000459854 PIGSQ96S52 555 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 TEX13BQ9BXU2 312 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 TMEM245Q9H330 911 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 NPHS2Q9NP85 383 aa10.21□□□□□ -0.77
UFD1-205ENST00000459854 SMIM31A0A1B0GVY4 71 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 STX7O15400 261 aaKnown RBP10.21□□□□□ -0.78
UFD1-205ENST00000459854 KLHL41O60662 606 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 SLC25A27O95847 323 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 TRIM49P0CI25 452 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 TRIM49CP0CI26 452 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 PSMA2P25787 234 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 KRT76Q01546 638 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 TBL3Q12788 808 aaKnown RBP10.21□□□□□ -0.78
UFD1-205ENST00000459854 GSTA3Q16772 222 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 SNRNP48Q6IEG0 339 aaKnown RBP10.21□□□□□ -0.78
UFD1-205ENST00000459854 USP38Q8NB14 1042 aa10.21□□□□□ -0.78
UFD1-205ENST00000459854 LRRC39Q96DD0 335 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms