RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 EPHA5P54756 1037 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 MTAPQ13126 283 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 PRPF4BQ13523 1007 aaKnown RBP6.22□□□□□ -1.41
VPS8-214ENST00000458721 UBAP2LQ14157 1087 aaKnown RBP6.22□□□□□ -1.41
VPS8-214ENST00000458721 CTTNQ14247 550 aaKnown RBP6.22□□□□□ -1.41
VPS8-214ENST00000458721 CSRP2Q16527 193 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 CALCRLQ16602 461 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 UPP1Q16831 310 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 HAUS3Q68CZ6 603 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 PIK3AP1Q6ZUJ8 805 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 CEP57Q86XR8 500 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 TPH2Q8IWU9 490 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 ITFG1Q8TB96 612 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 POM121Q96HA1 1249 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 ASB16Q96NS5 453 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 PPP1R10Q96QC0 940 aaKnown RBP6.22□□□□□ -1.41
VPS8-214ENST00000458721 PAAF1Q9BRP4 392 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 RPP25Q9BUL9 199 aaKnown RBP6.22□□□□□ -1.41
VPS8-214ENST00000458721 TRMT61BQ9BVS5 477 aaKnown RBP6.22□□□□□ -1.41
VPS8-214ENST00000458721 CCDC113Q9H0I3 377 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 TTC12Q9H892 705 aaPredicted RBP6.22□□□□□ -1.41
VPS8-214ENST00000458721 BRD9Q9H8M2 597 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 ZFP14Q9HCL3 533 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 TUFT1Q9NNX1 390 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 HEBP1Q9NRV9 189 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 DNMT3BQ9UBC3 853 aaKnown RBP6.22□□□□□ -1.41
VPS8-214ENST00000458721 SERTAD1Q9UHV2 236 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 ZMYM5Q9UJ78 669 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 ATXN7L1Q9ULK2 861 aaPredicted RBP6.22□□□□□ -1.41
VPS8-214ENST00000458721 CDY1Q9Y6F8 540 aa6.22□□□□□ -1.41
VPS8-214ENST00000458721 CNOT1A5YKK6 2376 aaKnown RBP6.21□□□□□ -1.42
VPS8-214ENST00000458721 TSC2P49815 1807 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 CCDC163A0A0D9SF12 145 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 A6NJY4 79 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 TMEM229AB2RXF0 380 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 PRRG1O14668 218 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 USO1O60763 962 aaKnown RBP6.21□□□□□ -1.42
VPS8-214ENST00000458721 FGF19O95750 216 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 ELF1P32519 619 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 YARSP54577 528 aaKnown RBP6.21□□□□□ -1.42
VPS8-214ENST00000458721 NTHL1P78549 312 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 SHC2P98077 582 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 ROR1Q01973 937 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 FCHO2Q0JRZ9 810 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 PLD1Q13393 1074 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 FZD5Q13467 585 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 ANKRD1Q15327 319 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 ST3GAL2Q16842 350 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 TMEM132AQ24JP5 1023 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 SLC5A9Q2M3M2 681 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 PRSS36Q5K4E3 855 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 DGKKQ5KSL6 1271 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 IQCEQ6IPM2 695 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 ZNF280DQ6N043 979 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 FIGNL1Q6PIW4 674 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 PDZD4Q76G19 769 aaPredicted RBP6.21□□□□□ -1.42
VPS8-214ENST00000458721 MAP4K3Q8IVH8 894 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 SYNPOQ8N3V7 929 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 SPEM1Q8N4L4 309 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 ERMNQ8TAM6 284 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 HASPINQ8TF76 798 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 KIFAP3Q92845 792 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 SMARCD2Q92925 531 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 TNFRSF25Q93038 417 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 LOXL4Q96JB6 756 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 NACC1Q96RE7 527 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 POLR3CQ9BUI4 534 aaPredicted RBP6.21□□□□□ -1.42
VPS8-214ENST00000458721 C8orf33Q9H7E9 229 aaPredicted RBP6.21□□□□□ -1.42
VPS8-214ENST00000458721 HCFC1R1Q9NWW0 138 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 SNTG2Q9NY99 539 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 KLK14Q9P0G3 267 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 KCNJ14Q9UNX9 436 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 MTF2Q9Y483 593 aaPredicted RBP6.21□□□□□ -1.42
VPS8-214ENST00000458721 PCDHGA11Q9Y5H2 935 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 INSL5Q9Y5Q6 135 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 DNMT3AQ9Y6K1 912 aaPredicted RBP6.21□□□□□ -1.42
VPS8-214ENST00000458721 PIAS3Q9Y6X2 628 aa6.21□□□□□ -1.42
VPS8-214ENST00000458721 WDR27A2RRH5 827 aa6.2□□□□□ -1.42
VPS8-214ENST00000458721 SHISA7A6NL88 538 aa6.2□□□□□ -1.42
VPS8-214ENST00000458721 ARNTLO00327 626 aa6.2□□□□□ -1.42
VPS8-214ENST00000458721 CDK2AP1O14519 115 aa6.2□□□□□ -1.42
VPS8-214ENST00000458721 ZBTB39O15060 712 aa6.2□□□□□ -1.42
VPS8-214ENST00000458721 CHADO15335 359 aa6.2□□□□□ -1.42
VPS8-214ENST00000458721 ADAM12O43184 909 aa6.2□□□□□ -1.42
VPS8-214ENST00000458721 OIP5O43482 229 aa6.2□□□□□ -1.42
VPS8-214ENST00000458721 PFKFB2O60825 505 aa6.2□□□□□ -1.42
VPS8-214ENST00000458721 AKAP3O75969 853 aa6.2□□□□□ -1.42
VPS8-214ENST00000458721 MYBP10242 640 aa6.2□□□□□ -1.42
VPS8-214ENST00000458721 CEBPBP17676 345 aa6.2□□□□□ -1.42
VPS8-214ENST00000458721 ATP2B1P20020 1258 aa6.2□□□□□ -1.42
VPS8-214ENST00000458721 CD72P21854 359 aa6.2□□□□□ -1.42
VPS8-214ENST00000458721 SCP2P22307 547 aa6.2□□□□□ -1.42
VPS8-214ENST00000458721 PAX3P23760 479 aa6.2□□□□□ -1.42
VPS8-214ENST00000458721 RPA1P27694 616 aa6.2□□□□□ -1.42
VPS8-214ENST00000458721 TKTP29401 623 aaKnown RBP6.2□□□□□ -1.42
VPS8-214ENST00000458721 RPL9P32969 192 aaKnown RBP6.2□□□□□ -1.42
VPS8-214ENST00000458721 CXCL12P48061 93 aa6.2□□□□□ -1.42
VPS8-214ENST00000458721 CLCNKBP51801 687 aa6.2□□□□□ -1.42
VPS8-214ENST00000458721 DMWDQ09019 674 aa6.2□□□□□ -1.42
VPS8-214ENST00000458721 SCRN1Q12765 414 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms