RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 MMS19Q96T76 1030 aa20.09■□□□□ 0.81
USP39-209ENST00000458268 OXCT2Q9BYC2 517 aaPredicted RBP20.09■□□□□ 0.81
USP39-209ENST00000458268 MMRN2Q9H8L6 949 aa20.09■□□□□ 0.81
USP39-209ENST00000458268 ABI2Q9NYB9 513 aaPredicted RBP20.09■□□□□ 0.81
USP39-209ENST00000458268 MRPS23Q9Y3D9 190 aaKnown RBP20.09■□□□□ 0.81
USP39-209ENST00000458268 PRPF40AO75400 957 aaKnown RBP20.08■□□□□ 0.81
USP39-209ENST00000458268 RHOP08100 348 aa20.08■□□□□ 0.81
USP39-209ENST00000458268 MYL4P12829 197 aa20.08■□□□□ 0.81
USP39-209ENST00000458268 PTPN2P17706 415 aa20.08■□□□□ 0.81
USP39-209ENST00000458268 TSPY1Q01534 308 aa20.08■□□□□ 0.81
USP39-209ENST00000458268 GPR17Q13304 367 aa20.08■□□□□ 0.81
USP39-209ENST00000458268 MTMR3Q13615 1198 aa20.08■□□□□ 0.81
USP39-209ENST00000458268 MYBPC2Q14324 1141 aa20.08■□□□□ 0.81
USP39-209ENST00000458268 IQCEQ6IPM2 695 aa20.08■□□□□ 0.81
USP39-209ENST00000458268 ADGRF2Q8IZF7 708 aa20.08■□□□□ 0.81
USP39-209ENST00000458268 PLEKHO2Q8TD55 490 aa20.08■□□□□ 0.81
USP39-209ENST00000458268 EDAQ92838 391 aa20.08■□□□□ 0.81
USP39-209ENST00000458268 MFSD14AQ96MC6 490 aa20.08■□□□□ 0.81
USP39-209ENST00000458268 ZNF512Q96ME7 567 aaPredicted RBP20.08■□□□□ 0.81
USP39-209ENST00000458268 LRFN3Q9BTN0 628 aa20.08■□□□□ 0.81
USP39-209ENST00000458268 CRISPLD1Q9H336 500 aa20.08■□□□□ 0.81
USP39-209ENST00000458268 C11orf16Q9NQ32 467 aa20.08■□□□□ 0.81
USP39-209ENST00000458268 DDX43Q9NXZ2 648 aaKnown RBP20.08■□□□□ 0.81
USP39-209ENST00000458268 SORCS3Q9UPU3 1222 aa20.08■□□□□ 0.81
USP39-209ENST00000458268 PCDHA5Q9Y5H7 936 aa20.08■□□□□ 0.81
USP39-209ENST00000458268 LRRIQ3A6PVS8 624 aaPredicted RBP20.07■□□□□ 0.8
USP39-209ENST00000458268 HCRTO43612 131 aa20.07■□□□□ 0.8
USP39-209ENST00000458268 ALDH1A3P47895 512 aa20.07■□□□□ 0.8
USP39-209ENST00000458268 MYL7Q01449 175 aa20.07■□□□□ 0.8
USP39-209ENST00000458268 MGAT5BQ3V5L5 792 aa20.07■□□□□ 0.8
USP39-209ENST00000458268 OSTM1Q86WC4 334 aa20.07■□□□□ 0.8
USP39-209ENST00000458268 HS6ST3Q8IZP7 471 aa20.07■□□□□ 0.8
USP39-209ENST00000458268 GUF1Q8N442 669 aaKnown RBP20.07■□□□□ 0.8
USP39-209ENST00000458268 CXorf38Q8TB03 319 aa20.07■□□□□ 0.8
USP39-209ENST00000458268 ZNF516Q92618 1163 aa20.07■□□□□ 0.8
USP39-209ENST00000458268 ELMO3Q96BJ8 720 aa20.07■□□□□ 0.8
USP39-209ENST00000458268 EEF2KMTQ96G04 330 aa20.07■□□□□ 0.8
USP39-209ENST00000458268 RTP3Q9BQQ7 232 aa20.07■□□□□ 0.8
USP39-209ENST00000458268 RHOBTB2Q9BYZ6 727 aa20.07■□□□□ 0.8
USP39-209ENST00000458268 ZCWPW1Q9H0M4 648 aa20.07■□□□□ 0.8
USP39-209ENST00000458268 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.07■□□□□ 0.8
USP39-209ENST00000458268 NXF1Q9UBU9 619 aaKnown RBP20.07■□□□□ 0.8
USP39-209ENST00000458268 NOTCH4Q99466 2003 aa20.07■□□□□ 0.8
USP39-209ENST00000458268 VNN2O95498 520 aa20.06■□□□□ 0.8
USP39-209ENST00000458268 CST3P01034 146 aaPredicted RBP20.06■□□□□ 0.8
USP39-209ENST00000458268 EPHB3P54753 998 aa20.06■□□□□ 0.8
USP39-209ENST00000458268 MYL6P60660 151 aa20.06■□□□□ 0.8
USP39-209ENST00000458268 TNNC1P63316 161 aa20.06■□□□□ 0.8
USP39-209ENST00000458268 DLG4P78352 724 aa20.06■□□□□ 0.8
USP39-209ENST00000458268 PDZD4Q76G19 769 aaPredicted RBP20.06■□□□□ 0.8
USP39-209ENST00000458268 DCP1BQ8IZD4 617 aaKnown RBP20.06■□□□□ 0.8
USP39-209ENST00000458268 MCRS1Q96EZ8 462 aa20.06■□□□□ 0.8
USP39-209ENST00000458268 KCNK12Q9HB15 430 aa20.06■□□□□ 0.8
USP39-209ENST00000458268 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.06■□□□□ 0.8
USP39-209ENST00000458268 CEP72Q9P209 647 aa20.06■□□□□ 0.8
USP39-209ENST00000458268 MUC3AQ02505 3323 aa20.06■□□□□ 0.8
USP39-209ENST00000458268 BIN1O00499 593 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 LAMP2P13473 410 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 KRT13P13646 458 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 GJA1P17302 382 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 CEBPBP17676 345 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 PRCPP42785 496 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 PSMC1P62191 440 aaKnown RBP20.05■□□□□ 0.8
USP39-209ENST00000458268 PLD1Q13393 1074 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 CCDC142Q17RM4 750 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 SLC5A9Q2M3M2 681 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 CYP4A22Q5TCH4 519 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 ZNF658Q5TYW1 1059 aaPredicted RBP20.05■□□□□ 0.8
USP39-209ENST00000458268 CENPPQ6IPU0 288 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 SCARA5Q6ZMJ2 495 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 TRIM67Q6ZTA4 783 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 LRRTM3Q86VH5 581 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 SLC9A9Q8IVB4 645 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 PARD3BQ8TEW8 1205 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 FGF13Q92913 245 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 TCEAL4Q96EI5 215 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 TIGD1Q96MW7 591 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 TSG101Q99816 390 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 GZF1Q9H116 711 aaPredicted RBP20.05■□□□□ 0.8
USP39-209ENST00000458268 ASAH2Q9NR71 780 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 DMAC2Q9NW81 257 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 RAPGEFL1Q9UHV5 662 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 CDH7Q9ULB5 785 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 TRAF3IP3Q9Y228 551 aa20.05■□□□□ 0.8
USP39-209ENST00000458268 TMEM221A6NGB7 291 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 M0R296 226 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 GPR37L1O60883 481 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 PDGFRBP09619 1106 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 TRIM49P0CI25 452 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 TRIM49CP0CI26 452 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 RPL13P26373 211 aaKnown RBP20.04■□□□□ 0.8
USP39-209ENST00000458268 ADAM9Q13443 819 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 TAF12Q16514 161 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 SOWAHAQ2M3V2 549 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 ZNF699Q32M78 642 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 WDR72Q3MJ13 1102 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 TDRD10Q5VZ19 366 aaKnown RBP20.04■□□□□ 0.8
USP39-209ENST00000458268 RTL10Q7L3V2 364 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 FAM186BQ8IYM0 893 aa20.04■□□□□ 0.8
USP39-209ENST00000458268 TMEM86AQ8N2M4 240 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms