RNA–Protein interactions for RNA: ENST00000458126.6

CDKN3-205, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-205ENST00000458126 VPS13CQ709C8 3753 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 SSU72P8A0A1W2PR75 194 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 FGF18O76093 207 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 MYL3P08590 195 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 ENDOUP21128 410 aaKnown RBP5.88□□□□□ -1.47
CDKN3-205ENST00000458126 ELF2Q15723 593 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 BROXQ5VW32 411 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 LILRA6Q6PI73 481 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 C15orf39Q6ZRI6 1047 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 RIOX2Q8IUF8 465 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 SLC34A3Q8N130 599 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 STAMQ92783 540 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 TMEM176AQ96HP8 235 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 SPATA32Q96LK8 384 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 FGD4Q96M96 766 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 RPP25Q9BUL9 199 aaKnown RBP5.88□□□□□ -1.47
CDKN3-205ENST00000458126 FOXP3Q9BZS1 431 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 TANGO6Q9C0B7 1094 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 KIAA1683Q9H0B3 1180 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 ANTXR1Q9H6X2 564 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 SFXN1Q9H9B4 322 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 HERC5Q9UII4 1024 aaKnown RBP5.88□□□□□ -1.47
CDKN3-205ENST00000458126 ZMYM5Q9UJ78 669 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 TCFL5Q9UL49 500 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 ADAMTS5Q9UNA0 930 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 ANK2Q01484 3957 aa5.88□□□□□ -1.47
CDKN3-205ENST00000458126 MYH15Q9Y2K3 1946 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 C2orf16Q68DN1 1984 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 SDK2Q58EX2 2172 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 FAM149AA5PLN7 773 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 OR14I1A6ND48 311 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 PLK4O00444 970 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 SIGLEC6O43699 453 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 CLEC3AO75596 197 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 RHOBTB1O94844 696 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 CLDN1O95832 211 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 LAMP2P13473 410 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 CD59P13987 128 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 EIF2S2P20042 333 aaKnown RBP5.87□□□□□ -1.47
CDKN3-205ENST00000458126 POLR2BP30876 1174 aaKnown RBP5.87□□□□□ -1.47
CDKN3-205ENST00000458126 EPHA5P54756 1037 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 TMEM132BQ14DG7 1078 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 NCAPHQ15003 741 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 SLC14A2Q15849 920 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 SHROOM1Q2M3G4 852 aaPredicted RBP5.87□□□□□ -1.47
CDKN3-205ENST00000458126 KIAA1614Q5VZ46 1190 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 TMC3Q7Z5M5 1100 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 ARID3BQ8IVW6 561 aaPredicted RBP5.87□□□□□ -1.47
CDKN3-205ENST00000458126 TAB3Q8N5C8 712 aaPredicted RBP5.87□□□□□ -1.47
CDKN3-205ENST00000458126 RBBP8NLQ8NC74 664 aaPredicted RBP5.87□□□□□ -1.47
CDKN3-205ENST00000458126 PNISRQ8TF01 805 aaKnown RBP5.87□□□□□ -1.47
CDKN3-205ENST00000458126 RTF1Q92541 710 aaKnown RBP5.87□□□□□ -1.47
CDKN3-205ENST00000458126 APBB2Q92870 758 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 CAMK1GQ96NX5 476 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 FEZ1Q99689 392 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 LMAN1LQ9HAT1 526 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 GCM1Q9NP62 436 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 ENTPD7Q9NQZ7 604 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 TMEM260Q9NX78 707 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 PRR13Q9NZ81 148 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 TNFRSF10DQ9UBN6 386 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 ZBTB21Q9ULJ3 1066 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 PCDHB12Q9Y5F1 795 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 UBE4BO95155 1302 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 HYDINQ4G0P3 5121 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 MYH3P11055 1940 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.87□□□□□ -1.474e-9■■■■■ 29.4
CDKN3-205ENST00000458126 UBR4Q5T4S7 5183 aa5.87□□□□□ -1.47
CDKN3-205ENST00000458126 GON4LQ3T8J9 2241 aa5.86□□□□□ -1.47
CDKN3-205ENST00000458126 TMEM82A0PJX8 343 aa5.86□□□□□ -1.47
CDKN3-205ENST00000458126 RSPH10B2B2RC85 870 aa5.86□□□□□ -1.47
CDKN3-205ENST00000458126 RSPH10BP0C881 870 aa5.86□□□□□ -1.47
CDKN3-205ENST00000458126 PNLIPP16233 465 aa5.86□□□□□ -1.47
CDKN3-205ENST00000458126 ENGP17813 658 aa5.86□□□□□ -1.47
CDKN3-205ENST00000458126 HOXC13P31276 330 aa5.86□□□□□ -1.47
CDKN3-205ENST00000458126 CSTF2P33240 577 aaKnown RBP eCLIP5.86□□□□□ -1.47
CDKN3-205ENST00000458126 CPT1AP50416 773 aa5.86□□□□□ -1.47
CDKN3-205ENST00000458126 PAK2Q13177 524 aa5.86□□□□□ -1.47
CDKN3-205ENST00000458126 PICALMQ13492 652 aa5.86□□□□□ -1.47
CDKN3-205ENST00000458126 BBS9Q3SYG4 887 aa5.86□□□□□ -1.47
CDKN3-205ENST00000458126 ZNF385BQ569K4 471 aa5.86□□□□□ -1.47
CDKN3-205ENST00000458126 NT5DC4Q86YG4 428 aa5.86□□□□□ -1.47
CDKN3-205ENST00000458126 CCDC144CPQ8IYA2 1237 aa5.86□□□□□ -1.47
CDKN3-205ENST00000458126 CCDC191Q8NCU4 936 aa5.86□□□□□ -1.47
CDKN3-205ENST00000458126 FERD3LQ96RJ6 166 aa5.86□□□□□ -1.47
CDKN3-205ENST00000458126 SEMA3CQ99985 751 aa5.86□□□□□ -1.47
CDKN3-205ENST00000458126 CARD11Q9BXL7 1154 aa5.86□□□□□ -1.47
CDKN3-205ENST00000458126 WDR6Q9NNW5 1121 aaKnown RBP5.86□□□□□ -1.47
CDKN3-205ENST00000458126 MBD1Q9UIS9 605 aaPredicted RBP5.86□□□□□ -1.47
CDKN3-205ENST00000458126 NDRG2Q9UN36 371 aaKnown RBP5.86□□□□□ -1.47
CDKN3-205ENST00000458126 NSD1Q96L73 2696 aaPredicted RBP5.86□□□□□ -1.47
CDKN3-205ENST00000458126 TTC3P53804 2025 aa5.86□□□□□ -1.47
CDKN3-205ENST00000458126 COL1A2P08123 1366 aa5.85□□□□□ -1.47
CDKN3-205ENST00000458126 C2orf71A6NGG8 1288 aa5.85□□□□□ -1.47
CDKN3-205ENST00000458126 SH3BP5O60239 455 aa5.85□□□□□ -1.47
CDKN3-205ENST00000458126 PRAMEF1O95521 474 aa5.85□□□□□ -1.47
CDKN3-205ENST00000458126 SYPP08247 313 aa5.85□□□□□ -1.47
CDKN3-205ENST00000458126 EPCAMP16422 314 aa5.85□□□□□ -1.47
CDKN3-205ENST00000458126 COPB2P35606 906 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms