RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 RASSF8Q8NHQ8 419 aa23.32■■□□□ 1.32
CPNE1-220ENST00000458038 RAD54LQ92698 747 aa23.32■■□□□ 1.32
CPNE1-220ENST00000458038 ST6GALNAC4Q9H4F1 302 aa23.32■■□□□ 1.32
CPNE1-220ENST00000458038 GMEB2Q9UKD1 530 aa23.32■■□□□ 1.32
CPNE1-220ENST00000458038 SLC27A5Q9Y2P5 690 aa23.32■■□□□ 1.32
CPNE1-220ENST00000458038 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.32■■□□□ 1.32
CPNE1-220ENST00000458038 NUP210Q8TEM1 1887 aaPredicted RBP23.32■■□□□ 1.32
CPNE1-220ENST00000458038 SCN1AP35498 2009 aa23.32■■□□□ 1.32
CPNE1-220ENST00000458038 SPTBN2O15020 2390 aa23.32■■□□□ 1.32
CPNE1-220ENST00000458038 PLCG1P19174 1290 aa23.31■■□□□ 1.32
CPNE1-220ENST00000458038 KPNA1P52294 538 aaPredicted RBP23.31■■□□□ 1.32
CPNE1-220ENST00000458038 MCM6Q14566 821 aa23.31■■□□□ 1.32
CPNE1-220ENST00000458038 VEPH1Q14D04 833 aa23.31■■□□□ 1.32
CPNE1-220ENST00000458038 RALGPS2Q86X27 583 aaPredicted RBP23.31■■□□□ 1.32
CPNE1-220ENST00000458038 METTL23Q86XA0 190 aa23.31■■□□□ 1.32
CPNE1-220ENST00000458038 C2orf15Q8WU43 125 aaKnown RBP23.31■■□□□ 1.32
CPNE1-220ENST00000458038 ATXN3LQ9H3M9 355 aa23.31■■□□□ 1.32
CPNE1-220ENST00000458038 STYXL1Q9Y6J8 313 aa23.31■■□□□ 1.32
CPNE1-220ENST00000458038 DDIT3P35638 169 aa23.3■■□□□ 1.32
CPNE1-220ENST00000458038 PLCB2Q00722 1185 aa23.3■■□□□ 1.32
CPNE1-220ENST00000458038 DGKKQ5KSL6 1271 aa23.3■■□□□ 1.32
CPNE1-220ENST00000458038 ADALQ6DHV7 355 aa23.3■■□□□ 1.32
CPNE1-220ENST00000458038 SLC39A4Q6P5W5 647 aa23.3■■□□□ 1.32
CPNE1-220ENST00000458038 GAREM2Q75VX8 874 aa23.3■■□□□ 1.32
CPNE1-220ENST00000458038 THEM5Q8N1Q8 247 aa23.3■■□□□ 1.32
CPNE1-220ENST00000458038 TMEM130Q8N3G9 435 aa23.3■■□□□ 1.32
CPNE1-220ENST00000458038 KRI1Q8N9T8 703 aaKnown RBP23.3■■□□□ 1.32
CPNE1-220ENST00000458038 LARP4BQ92615 738 aaKnown RBP23.3■■□□□ 1.32
CPNE1-220ENST00000458038 FIZ1Q96SL8 496 aa23.3■■□□□ 1.32
CPNE1-220ENST00000458038 ZHX3Q9H4I2 956 aa23.3■■□□□ 1.32
CPNE1-220ENST00000458038 TPRP12270 2363 aaKnown RBP23.29■■□□□ 1.32
CPNE1-220ENST00000458038 MED19A0JLT2 244 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-220ENST00000458038 MYBPHLA2RUH7 354 aa23.29■■□□□ 1.32
CPNE1-220ENST00000458038 PPEF2O14830 753 aa23.29■■□□□ 1.32
CPNE1-220ENST00000458038 LRP3O75074 770 aa23.29■■□□□ 1.32
CPNE1-220ENST00000458038 PAPSS2O95340 614 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-220ENST00000458038 GABRR2P28476 465 aa23.29■■□□□ 1.32
CPNE1-220ENST00000458038 CDC25CP30307 473 aa23.29■■□□□ 1.32
CPNE1-220ENST00000458038 CNR2P34972 360 aa23.29■■□□□ 1.32
CPNE1-220ENST00000458038 KARSQ15046 597 aaKnown RBP23.29■■□□□ 1.32
CPNE1-220ENST00000458038 POSTNQ15063 836 aa23.29■■□□□ 1.32
CPNE1-220ENST00000458038 GPR158Q5T848 1215 aa23.29■■□□□ 1.32
CPNE1-220ENST00000458038 LAIR1Q6GTX8 287 aa23.29■■□□□ 1.32
CPNE1-220ENST00000458038 NT5DC4Q86YG4 428 aa23.29■■□□□ 1.32
CPNE1-220ENST00000458038 FAM200AQ8TCP9 573 aa23.29■■□□□ 1.32
CPNE1-220ENST00000458038 HVCN1Q96D96 273 aa23.29■■□□□ 1.32
CPNE1-220ENST00000458038 RSPRY1Q96DX4 576 aa23.29■■□□□ 1.32
CPNE1-220ENST00000458038 CCSER1Q9C0I3 900 aa23.29■■□□□ 1.32
CPNE1-220ENST00000458038 ZCWPW1Q9H0M4 648 aa23.29■■□□□ 1.32
CPNE1-220ENST00000458038 UPF2Q9HAU5 1272 aaKnown RBP23.29■■□□□ 1.32
CPNE1-220ENST00000458038 AGO2Q9UKV8 859 aaKnown RBP23.29■■□□□ 1.32
CPNE1-220ENST00000458038 TCHHQ07283 1943 aa23.29■■□□□ 1.32
CPNE1-220ENST00000458038 NCANO14594 1321 aa23.29■■□□□ 1.32
CPNE1-220ENST00000458038 NFICP08651 508 aa23.28■■□□□ 1.32
CPNE1-220ENST00000458038 NMT1P30419 496 aaKnown RBP23.28■■□□□ 1.32
CPNE1-220ENST00000458038 TAF6P49848 677 aa23.28■■□□□ 1.32
CPNE1-220ENST00000458038 SLC39A12Q504Y0 691 aa23.28■■□□□ 1.32
CPNE1-220ENST00000458038 SYNPOQ8N3V7 929 aa23.28■■□□□ 1.32
CPNE1-220ENST00000458038 SPPL2BQ8TCT7 592 aa23.28■■□□□ 1.32
CPNE1-220ENST00000458038 GCNAQ96QF7 691 aa23.28■■□□□ 1.32
CPNE1-220ENST00000458038 MKNK1Q9BUB5 465 aa23.28■■□□□ 1.32
CPNE1-220ENST00000458038 TASP1Q9H6P5 420 aa23.28■■□□□ 1.32
CPNE1-220ENST00000458038 THG1LQ9NWX6 298 aaKnown RBP23.28■■□□□ 1.32
CPNE1-220ENST00000458038 DPP3Q9NY33 737 aa23.28■■□□□ 1.32
CPNE1-220ENST00000458038 RALGAPA1Q6GYQ0 2036 aa23.28■■□□□ 1.32
CPNE1-220ENST00000458038 TSC2P49815 1807 aa23.27■■□□□ 1.32
CPNE1-220ENST00000458038 SPECC1L-ADORA2AF8WAN1 911 aa23.27■■□□□ 1.32
CPNE1-220ENST00000458038 CYB561D2O14569 222 aa23.27■■□□□ 1.32
CPNE1-220ENST00000458038 IL18RAPO95256 599 aa23.27■■□□□ 1.32
CPNE1-220ENST00000458038 ACOT2P49753 483 aa23.27■■□□□ 1.32
CPNE1-220ENST00000458038 PTPAQ15257 358 aa23.27■■□□□ 1.32
CPNE1-220ENST00000458038 TAF12Q16514 161 aa23.27■■□□□ 1.32
CPNE1-220ENST00000458038 STXBP5Q5T5C0 1151 aa23.27■■□□□ 1.32
CPNE1-220ENST00000458038 OR10T2Q8NGX3 314 aa23.27■■□□□ 1.32
CPNE1-220ENST00000458038 LRRC15Q8TF66 581 aa23.27■■□□□ 1.32
CPNE1-220ENST00000458038 TMEM209Q96SK2 561 aa23.27■■□□□ 1.32
CPNE1-220ENST00000458038 SEL1LQ9UBV2 794 aa23.27■■□□□ 1.32
CPNE1-220ENST00000458038 CDV3Q9UKY7 258 aaKnown RBP23.27■■□□□ 1.32
CPNE1-220ENST00000458038 USP18Q9UMW8 372 aa23.27■■□□□ 1.32
CPNE1-220ENST00000458038 SLC38A8A6NNN8 435 aa23.26■■□□□ 1.31
CPNE1-220ENST00000458038 ANKRD63C9JTQ0 380 aa23.26■■□□□ 1.31
CPNE1-220ENST00000458038 CTHP32929 405 aa23.26■■□□□ 1.31
CPNE1-220ENST00000458038 MGAT5BQ3V5L5 792 aa23.26■■□□□ 1.31
CPNE1-220ENST00000458038 ZNF720Q7Z2F6 126 aa23.26■■□□□ 1.31
CPNE1-220ENST00000458038 DCP1BQ8IZD4 617 aaKnown RBP23.26■■□□□ 1.31
CPNE1-220ENST00000458038 TTC9BQ8N6N2 239 aa23.26■■□□□ 1.31
CPNE1-220ENST00000458038 BPIFB1Q8TDL5 484 aa23.26■■□□□ 1.31
CPNE1-220ENST00000458038 SEPT5Q99719 369 aaPredicted RBP23.26■■□□□ 1.31
CPNE1-220ENST00000458038 STK17AQ9UEE5 414 aa23.26■■□□□ 1.31
CPNE1-220ENST00000458038 ZNF638Q14966 1978 aaKnown RBP23.26■■□□□ 1.31
CPNE1-220ENST00000458038 DENND4CQ5VZ89 1909 aa23.25■■□□□ 1.31
CPNE1-220ENST00000458038 SOBPA7XYQ1 873 aa23.25■■□□□ 1.31
CPNE1-220ENST00000458038 RETP07949 1114 aa23.25■■□□□ 1.31
CPNE1-220ENST00000458038 TGM1P22735 817 aa23.25■■□□□ 1.31
CPNE1-220ENST00000458038 HOXA6P31267 233 aa23.25■■□□□ 1.31
CPNE1-220ENST00000458038 PNPLA4P41247 253 aa23.25■■□□□ 1.31
CPNE1-220ENST00000458038 SATB1Q01826 763 aa23.25■■□□□ 1.31
CPNE1-220ENST00000458038 SF3A1Q15459 793 aaKnown RBP23.25■■□□□ 1.31
CPNE1-220ENST00000458038 SV2CQ496J9 727 aa23.25■■□□□ 1.31
CPNE1-220ENST00000458038 PYM1Q9BRP8 204 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms