RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 RRM1P23921 792 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 NAMPTP43490 491 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 RWDD2BP57060 319 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 IGBP1P78318 339 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 ARMC9Q7Z3E5 817 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 CCDC50Q8IVM0 306 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 RNF149Q8NC42 400 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 ACSF2Q96CM8 615 aaPredicted RBP13.17□□□□□ -0.3
LINC00959-201ENST00000456581 SLC10A4Q96EP9 437 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 FNBP1Q96RU3 617 aa13.17□□□□□ -0.3
LINC00959-201ENST00000456581 DOCK3Q8IZD9 2030 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 VNN1O95497 513 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 HLA-DRAP01903 254 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 TXNP10599 105 aaKnown RBP13.16□□□□□ -0.3
LINC00959-201ENST00000456581 BRAFP15056 766 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 RFX1P22670 979 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 MFAP3P55082 362 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 OSTNP61366 133 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 TNFAIP8L3Q5GJ75 292 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 CELF3Q5SZQ8 465 aaKnown RBP13.16□□□□□ -0.3
LINC00959-201ENST00000456581 FAXDC2Q96IV6 333 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 L3MBTL3Q96JM7 780 aaPredicted RBP13.16□□□□□ -0.3
LINC00959-201ENST00000456581 FAM167BQ9BTA0 163 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 WNT8AQ9H1J5 351 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 NRBP2Q9NSY0 501 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC00959-201ENST00000456581 RBAKQ9NYW8 714 aaPredicted RBP13.16□□□□□ -0.3
LINC00959-201ENST00000456581 MTUS1Q9ULD2 1270 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC00959-201ENST00000456581 USTQ9Y2C2 406 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 CEP83Q9Y592 693 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 THAP12O43422 761 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 ZSCAN5DPP0CG00 497 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 GHRP10912 638 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 TCF4P15884 667 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 CD58P19256 250 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 IVDP26440 423 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 GBP2P32456 591 aaPredicted RBP13.16□□□□□ -0.3
LINC00959-201ENST00000456581 ADCY8P40145 1251 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 SSR1P43307 286 aaKnown RBP13.16□□□□□ -0.3
LINC00959-201ENST00000456581 CLCN3P51790 818 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 GPR162Q16538 588 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 ATP13A4Q4VNC1 1196 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 TAB3Q8N5C8 712 aaPredicted RBP13.16□□□□□ -0.3
LINC00959-201ENST00000456581 TMEM237Q96Q45 408 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 RPS6KC1Q96S38 1066 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 TCHPQ9BT92 498 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 RNPEPQ9H4A4 650 aa13.16□□□□□ -0.3
LINC00959-201ENST00000456581 APOBEC3GQ9HC16 384 aaKnown RBP13.16□□□□□ -0.3
LINC00959-201ENST00000456581 B4GALT5O43286 388 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 SLC25A27O95847 323 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 RALAP11233 206 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 ETS1P14921 441 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 FOXN2P32314 431 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 FAM160B1Q5W0V3 765 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 CCDC62Q6P9F0 684 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 RHPN2Q8IUC4 686 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 FMNL3Q8IVF7 1028 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 CEP120Q8N960 986 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 DDX1Q92499 740 aaKnown RBP13.15□□□□□ -0.3
LINC00959-201ENST00000456581 NLRP4Q96MN2 994 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 C12orf65Q9H3J6 166 aaKnown RBP13.15□□□□□ -0.3
LINC00959-201ENST00000456581 NINJ2Q9NZG7 142 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 NKX1-2Q9UD57 310 aaPredicted RBP13.15□□□□□ -0.3
LINC00959-201ENST00000456581 ZMYND8Q9ULU4 1186 aaPredicted RBP13.15□□□□□ -0.3
LINC00959-201ENST00000456581 USP15Q9Y4E8 981 aaPredicted RBP13.15□□□□□ -0.3
LINC00959-201ENST00000456581 A0A0B4J269 797 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 GLTPD2A6NH11 291 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 PI4K2BG5E9Z4 385 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 ADCY3O60266 1144 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 MAFO75444 373 aaPredicted RBP13.15□□□□□ -0.3
LINC00959-201ENST00000456581 NEBLO76041 1014 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 C4BPAP04003 597 aaKnown RBP13.15□□□□□ -0.3
LINC00959-201ENST00000456581 CYP1A2P05177 515 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 TGFB3P10600 412 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 EZRP15311 586 aaKnown RBP13.15□□□□□ -0.3
LINC00959-201ENST00000456581 MAPK4P31152 587 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 HADHBP55084 474 aaKnown RBP13.15□□□□□ -0.3
LINC00959-201ENST00000456581 LAMTOR4Q0VGL1 99 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 ITIH4Q14624 930 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 SLMAPQ14BN4 828 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 PPP2R5EQ16537 467 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 CYP1B1Q16678 543 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 ZNF568Q3ZCX4 644 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 C15orf39Q6ZRI6 1047 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 UTP4Q969X6 686 aaKnown RBP13.15□□□□□ -0.3
LINC00959-201ENST00000456581 TGS1Q96RS0 853 aaKnown RBP13.15□□□□□ -0.3
LINC00959-201ENST00000456581 SLCO1B3Q9NPD5 702 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 MROH7Q68CQ1 1323 aa13.15□□□□□ -0.3
LINC00959-201ENST00000456581 KAT6AQ92794 2004 aa13.15□□□□□ -0.31
LINC00959-201ENST00000456581 BANF1O75531 89 aa13.14□□□□□ -0.31
LINC00959-201ENST00000456581 OAS1P00973 400 aaKnown RBP13.14□□□□□ -0.31
LINC00959-201ENST00000456581 NQO1P15559 274 aaKnown RBP13.14□□□□□ -0.31
LINC00959-201ENST00000456581 OSBPP22059 807 aa13.14□□□□□ -0.31
LINC00959-201ENST00000456581 PIK3CAP42336 1068 aa13.14□□□□□ -0.31
LINC00959-201ENST00000456581 PDE6CP51160 858 aa13.14□□□□□ -0.31
LINC00959-201ENST00000456581 FASTKD3Q14CZ7 662 aaKnown RBP13.14□□□□□ -0.31
LINC00959-201ENST00000456581 ZACNQ401N2 412 aa13.14□□□□□ -0.31
LINC00959-201ENST00000456581 SPDYCQ5MJ68 293 aa13.14□□□□□ -0.31
LINC00959-201ENST00000456581 LDLRAD1Q5T700 205 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms