RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 C1orf228Q6PIY5 440 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 DTHD1Q6ZMT9 781 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 LONP2Q86WA8 852 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 RALGPS2Q86X27 583 aaPredicted RBP12.93□□□□□ -0.34
LMCD1-206ENST00000456506 KCTD17Q8N5Z5 321 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 FIZ1Q96SL8 496 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 OBP2AQ9NY56 170 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 KCND2Q9NZV8 630 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 HSFX1Q9UBD0 423 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 ASB3Q9Y575 518 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.93□□□□□ -0.34
LMCD1-206ENST00000456506 ASPMQ8IZT6 3477 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 FRYQ5TBA9 3013 aa12.93□□□□□ -0.34
LMCD1-206ENST00000456506 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.92□□□□□ -0.34
LMCD1-206ENST00000456506 ANO9A1A5B4 782 aa12.92□□□□□ -0.34
LMCD1-206ENST00000456506 PIRO00625 290 aa12.92□□□□□ -0.34
LMCD1-206ENST00000456506 TM4SF5O14894 197 aa12.92□□□□□ -0.34
LMCD1-206ENST00000456506 CYP11A1P05108 521 aa12.92□□□□□ -0.34
LMCD1-206ENST00000456506 EPHB3P54753 998 aa12.92□□□□□ -0.34
LMCD1-206ENST00000456506 TNK2Q07912 1038 aa12.92□□□□□ -0.34
LMCD1-206ENST00000456506 LRRC32Q14392 662 aa12.92□□□□□ -0.34
LMCD1-206ENST00000456506 ARHGAP29Q52LW3 1261 aa12.92□□□□□ -0.34
LMCD1-206ENST00000456506 DGKKQ5KSL6 1271 aa12.92□□□□□ -0.34
LMCD1-206ENST00000456506 OVOS1Q6IE37 1185 aa12.92□□□□□ -0.34
LMCD1-206ENST00000456506 PRR23BQ6ZRT6 265 aa12.92□□□□□ -0.34
LMCD1-206ENST00000456506 HAUS6Q7Z4H7 955 aa12.92□□□□□ -0.34
LMCD1-206ENST00000456506 TMEM150AQ86TG1 271 aa12.92□□□□□ -0.34
LMCD1-206ENST00000456506 FAM160A2Q8N612 972 aaPredicted RBP12.92□□□□□ -0.34
LMCD1-206ENST00000456506 CSGALNACT1Q8TDX6 532 aa12.92□□□□□ -0.34
LMCD1-206ENST00000456506 KIF12Q96FN5 646 aa12.92□□□□□ -0.34
LMCD1-206ENST00000456506 KCNG1Q9UIX4 513 aa12.92□□□□□ -0.34
LMCD1-206ENST00000456506 CPSF3Q9UKF6 684 aaKnown RBP12.92□□□□□ -0.34
LMCD1-206ENST00000456506 THADAQ6YHU6 1953 aa12.92□□□□□ -0.34
LMCD1-206ENST00000456506 A0A0B4J269 797 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 OTOL1A6NHN0 477 aaPredicted RBP12.91□□□□□ -0.34
LMCD1-206ENST00000456506 OGTO15294 1046 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 PLA2G4BP0C869 781 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 GABRR2P28476 465 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 ZNF131P52739 623 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 SMTNP53814 917 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 PPP2R3AQ06190 1150 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 GNL2Q13823 731 aaKnown RBP12.91□□□□□ -0.34
LMCD1-206ENST00000456506 PON2Q15165 354 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 PPM1JQ5JR12 505 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 GPR158Q5T848 1215 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 C9orf57Q5W0N0 161 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 WDR5BQ86VZ2 330 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 TTC8Q8TAM2 541 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 RIN3Q8TB24 985 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 SENP8Q96LD8 212 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 ZSCAN31Q96LW9 406 aaPredicted RBP12.91□□□□□ -0.34
LMCD1-206ENST00000456506 TSPAN18Q96SJ8 248 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 PLIN2Q99541 437 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 LPIN3Q9BQK8 851 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 REEP2Q9BRK0 252 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 ZCWPW1Q9H0M4 648 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 SLITRK6Q9H5Y7 841 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 SH2B1Q9NRF2 756 aaPredicted RBP12.91□□□□□ -0.34
LMCD1-206ENST00000456506 RAB23Q9ULC3 237 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 TBX20Q9UMR3 447 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 CHD6Q8TD26 2715 aa12.91□□□□□ -0.34
LMCD1-206ENST00000456506 EXTL3O43909 919 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 NFICP08651 508 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 ALDH1A3P47895 512 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 KPNA1P52294 538 aaPredicted RBP12.9□□□□□ -0.34
LMCD1-206ENST00000456506 CYP4F8P98187 520 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 JADE1Q6IE81 842 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 DSTYKQ6XUX3 929 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 USP37Q86T82 979 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 LRRTM3Q86VH5 581 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 YAF2Q8IY57 180 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 SYNPOQ8N3V7 929 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 FAM184AQ8NB25 1140 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 BPIFB1Q8TDL5 484 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 FAM83CQ9BQN1 747 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 SLC46A2Q9BY10 475 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 ATXN3LQ9H3M9 355 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 TASP1Q9H6P5 420 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 HPS4Q9NQG7 708 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 BLOC1S4Q9NUP1 217 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 ODF2LQ9ULJ1 636 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 SDK1Q7Z5N4 2213 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 MYOFQ9NZM1 2061 aa12.9□□□□□ -0.34
LMCD1-206ENST00000456506 CNOT1A5YKK6 2376 aaKnown RBP12.89□□□□□ -0.35
LMCD1-206ENST00000456506 ANKRD63C9JTQ0 380 aa12.89□□□□□ -0.35
LMCD1-206ENST00000456506 ODC1P11926 461 aa12.89□□□□□ -0.35
LMCD1-206ENST00000456506 HMGA1P17096 107 aaKnown RBP12.89□□□□□ -0.35
LMCD1-206ENST00000456506 RAP1GAPP47736 663 aa12.89□□□□□ -0.35
LMCD1-206ENST00000456506 LIMK1P53667 647 aa12.89□□□□□ -0.35
LMCD1-206ENST00000456506 KYAT1Q16773 422 aa12.89□□□□□ -0.35
LMCD1-206ENST00000456506 TMEM196Q5HYL7 178 aa12.89□□□□□ -0.35
LMCD1-206ENST00000456506 HEATR6Q6AI08 1181 aaKnown RBP12.89□□□□□ -0.35
LMCD1-206ENST00000456506 FSTL4Q6MZW2 842 aa12.89□□□□□ -0.35
LMCD1-206ENST00000456506 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.89□□□□□ -0.35
LMCD1-206ENST00000456506 CCSER1Q9C0I3 900 aa12.89□□□□□ -0.35
LMCD1-206ENST00000456506 SMG9Q9H0W8 520 aaKnown RBP12.89□□□□□ -0.35
LMCD1-206ENST00000456506 RXFP3Q9NSD7 469 aa12.89□□□□□ -0.35
LMCD1-206ENST00000456506 LARSQ9P2J5 1176 aaKnown RBP12.89□□□□□ -0.35
LMCD1-206ENST00000456506 CCDC163A0A0D9SF12 145 aa12.88□□□□□ -0.35
LMCD1-206ENST00000456506 VWA3AA6NCI4 1184 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms