RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 SIX4Q9UIU6 781 aa11.12□□□□□ -0.63
TOP3B-212ENST00000456075 MAN1B1Q9UKM7 699 aa11.12□□□□□ -0.63
TOP3B-212ENST00000456075 USTQ9Y2C2 406 aa11.12□□□□□ -0.63
TOP3B-212ENST00000456075 INSL5Q9Y5Q6 135 aa11.12□□□□□ -0.63
TOP3B-212ENST00000456075 ANK1P16157 1881 aa11.12□□□□□ -0.63
TOP3B-212ENST00000456075 PLXNA3P51805 1871 aa11.12□□□□□ -0.63
TOP3B-212ENST00000456075 LRRIQ3A6PVS8 624 aaPredicted RBP11.11□□□□□ -0.63
TOP3B-212ENST00000456075 C2CD4DB7Z1M9 353 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 MAPK13O15264 365 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 STX10O60499 249 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 P4HA1P13674 534 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 FSHRP23945 695 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 PCSK1P29120 753 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 ATICP31939 592 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 LHX1P48742 406 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 VAMP7P51809 220 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 LRRC63Q05C16 580 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 SMARCB1Q12824 385 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 NCOA4Q13772 614 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 ZNF699Q32M78 642 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 WDR72Q3MJ13 1102 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 PABPC1LQ4VXU2 614 aaKnown RBP11.11□□□□□ -0.63
TOP3B-212ENST00000456075 COBLL1Q53SF7 1204 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 DPH6Q7L8W6 267 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 ADSSL1Q8N142 457 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 CCDC150Q8NCX0 1101 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 FAM200AQ8TCP9 573 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 DHTKD1Q96HY7 919 aaPredicted RBP11.11□□□□□ -0.63
TOP3B-212ENST00000456075 ZNF512Q96ME7 567 aaPredicted RBP11.11□□□□□ -0.63
TOP3B-212ENST00000456075 SNX25Q9H3E2 840 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 MMRN2Q9H8L6 949 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 CD320Q9NPF0 282 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 DDX43Q9NXZ2 648 aaKnown RBP11.11□□□□□ -0.63
TOP3B-212ENST00000456075 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.11□□□□□ -0.63
TOP3B-212ENST00000456075 L1RE1Q9UN81 338 aa11.11□□□□□ -0.63
TOP3B-212ENST00000456075 BICDL2A1A5D9 508 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 IKBKBO14920 756 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 DCXO43602 365 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 AKAP3O75969 853 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 SEC24AO95486 1093 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 POU2F2P09086 479 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 PTPN2P17706 415 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 PIK3CAP42336 1068 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 EPHB3P54753 998 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 FKBP3Q00688 224 aaKnown RBP11.1□□□□□ -0.63
TOP3B-212ENST00000456075 TWF1Q12792 350 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 DUSP4Q13115 394 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 VEPH1Q14D04 833 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 TAF12Q16514 161 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 NFE2Q16621 373 aaPredicted RBP11.1□□□□□ -0.63
TOP3B-212ENST00000456075 MGAT5BQ3V5L5 792 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 ZCWPW2Q504Y3 356 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 ZNF667Q5HYK9 610 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 CYP4A22Q5TCH4 519 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 TCERG1LQ5VWI1 586 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 TDRD10Q5VZ19 366 aaKnown RBP11.1□□□□□ -0.63
TOP3B-212ENST00000456075 TRIML1Q8N9V2 468 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 ATAD1Q8NBU5 361 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 OR10T2Q8NGX3 314 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 SPATA18Q8TC71 538 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 C2orf15Q8WU43 125 aaKnown RBP11.1□□□□□ -0.63
TOP3B-212ENST00000456075 EEF2KMTQ96G04 330 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 BORCS6Q96GS4 357 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 SEPT5Q99719 369 aaPredicted RBP11.1□□□□□ -0.63
TOP3B-212ENST00000456075 CORO1BQ9BR76 489 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 MKNK1Q9BUB5 465 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 ZCWPW1Q9H0M4 648 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 ABI2Q9NYB9 513 aaPredicted RBP11.1□□□□□ -0.63
TOP3B-212ENST00000456075 NXF1Q9UBU9 619 aaKnown RBP11.1□□□□□ -0.63
TOP3B-212ENST00000456075 MUTYHQ9UIF7 546 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 MRPS23Q9Y3D9 190 aaKnown RBP11.1□□□□□ -0.63
TOP3B-212ENST00000456075 YIPF1Q9Y548 306 aa11.1□□□□□ -0.63
TOP3B-212ENST00000456075 MTMR11A4FU01 709 aa11.09□□□□□ -0.63
TOP3B-212ENST00000456075 SLC16A3O15427 465 aaKnown RBP11.09□□□□□ -0.63
TOP3B-212ENST00000456075 CST3P01034 146 aaPredicted RBP11.09□□□□□ -0.63
TOP3B-212ENST00000456075 TRIM49P0CI25 452 aa11.09□□□□□ -0.63
TOP3B-212ENST00000456075 TRIM49CP0CI26 452 aa11.09□□□□□ -0.63
TOP3B-212ENST00000456075 TRIM21P19474 475 aaKnown RBP11.09□□□□□ -0.63
TOP3B-212ENST00000456075 ACAT1P24752 427 aaKnown RBP11.09□□□□□ -0.63
TOP3B-212ENST00000456075 CCNE1P24864 410 aa11.09□□□□□ -0.63
TOP3B-212ENST00000456075 GCLMP48507 274 aa11.09□□□□□ -0.63
TOP3B-212ENST00000456075 TUFMP49411 452 aaKnown RBP11.09□□□□□ -0.63
TOP3B-212ENST00000456075 MYL6P60660 151 aa11.09□□□□□ -0.63
TOP3B-212ENST00000456075 DLG4P78352 724 aa11.09□□□□□ -0.63
TOP3B-212ENST00000456075 CLDN10P78369 228 aa11.09□□□□□ -0.63
TOP3B-212ENST00000456075 ENPEPQ07075 957 aa11.09□□□□□ -0.63
TOP3B-212ENST00000456075 MORC3Q14149 939 aa11.09□□□□□ -0.63
TOP3B-212ENST00000456075 SOWAHAQ2M3V2 549 aa11.09□□□□□ -0.63
TOP3B-212ENST00000456075 SGSM1Q2NKQ1 1148 aa11.09□□□□□ -0.63
TOP3B-212ENST00000456075 DCAF17Q5H9S7 520 aaPredicted RBP11.09□□□□□ -0.63
TOP3B-212ENST00000456075 ANKRD40Q6AI12 368 aa11.09□□□□□ -0.63
TOP3B-212ENST00000456075 CENPPQ6IPU0 288 aa11.09□□□□□ -0.63
TOP3B-212ENST00000456075 CLEC17AQ6ZS10 378 aa11.09□□□□□ -0.63
TOP3B-212ENST00000456075 PDZD4Q76G19 769 aaPredicted RBP11.09□□□□□ -0.63
TOP3B-212ENST00000456075 ZDHHC14Q8IZN3 488 aa11.09□□□□□ -0.63
TOP3B-212ENST00000456075 OR6B3Q8NGW1 331 aa11.09□□□□□ -0.63
TOP3B-212ENST00000456075 CXorf38Q8TB03 319 aa11.09□□□□□ -0.63
TOP3B-212ENST00000456075 FEZF2Q8TBJ5 459 aa11.09□□□□□ -0.63
TOP3B-212ENST00000456075 SPPL2BQ8TCT7 592 aa11.09□□□□□ -0.63
TOP3B-212ENST00000456075 PLEKHO2Q8TD55 490 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms