RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 SMIM11AP58511 58 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 MTX3Q5HYI7 312 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 EIF5AL1Q6IS14 154 aaKnown RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 CYP4Z1Q86W10 505 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 NIM1KQ8IY84 436 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 FNIP1Q8TF40 1166 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 IARS2Q9NSE4 1012 aaKnown RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 IRAK3Q9Y616 596 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 TMEM114B3SHH9 223 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 C5orf58C9J3I9 102 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 PCNAP12004 261 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 S100GP29377 79 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 VSNL1P62760 191 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 HDLBPQ00341 1268 aaKnown RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 MSLNQ13421 630 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 ACAP1Q15027 740 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 GJC2Q5T442 439 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 ARCQ7LC44 396 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 PGBD1Q96JS3 809 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 RHOBTB2Q9BYZ6 727 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 SLC52A2Q9HAB3 445 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 POLG2Q9UHN1 485 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 A0A0G2JND7 137 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 PLEKHG3A1L390 1219 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 NEURL1BA8MQ27 555 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 PSMA2P25787 234 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 IL6STP40189 918 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 CAPZA1P52907 286 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 PPIDQ08752 370 aaKnown RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 PNOCQ13519 176 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 TTLL12Q14166 644 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 MXD4Q14582 209 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 PREPLQ4J6C6 727 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 SLC10A5Q5PT55 438 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 UBE2R2Q712K3 238 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 CATSPER3Q86XQ3 398 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 ILKAPQ9H0C8 392 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 CORO1CQ9ULV4 474 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-204ENST00000455883 PCDHB4Q9Y5E5 795 aa5.44□□□□□ -1.54
CSMD3-204ENST00000455883 PLCE1Q9P212 2302 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 SNRPAP09012 282 aaKnown RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 POLR2FP61218 127 aaKnown RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 C12orf60Q5U649 245 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 KCTD16Q68DU8 428 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 LIN54Q6MZP7 749 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 MZT2BQ6NZ67 158 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 PHF20Q9BVI0 1012 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 POC1B-GALNT4F8VUJ3 575 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 NPTXRO95502 500 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 BCL10O95999 233 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 ITGB6P18564 788 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 EIF4A2Q14240 407 aaKnown RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 KYNUQ16719 465 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 TTC39BQ5VTQ0 682 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 DPP10Q8N608 796 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 ACMSDQ8TDX5 336 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 TNIP3Q96KP6 325 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 MYLK2Q9H1R3 596 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 CCDC59Q9P031 241 aaKnown RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 KLHL20Q9Y2M5 609 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 RTN2O75298 545 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 BBOX1O75936 387 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 PDE8BO95263 885 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 ERP29P30040 261 aaKnown RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 DDIT3P35638 169 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 EIF4A3P38919 411 aaKnown RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 CTSWP56202 376 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 TRIQKQ629K1 86 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 TMPRSS6Q8IU80 811 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 SPATA16Q9BXB7 569 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 RMND5AQ9H871 391 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 ABCB6Q9NP58 842 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 USP6P35125 1406 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 MEGF6O75095 1541 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 DNAJB5O75953 348 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 RECQL5O94762 991 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 RHOBTB1O94844 696 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 ACSL3O95573 720 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 TXKP42681 527 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 EAPPQ56P03 285 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 EFHC2Q5JST6 749 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 BHLHB9Q6PI77 547 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 CCDC103Q8IW40 242 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 IFNL3Q8IZI9 196 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 RUBCNLQ9H714 662 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 SLC9A2Q9UBY0 812 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 REM1O75628 298 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 RHOBTB3O94955 611 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 KPNA1P52294 538 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 NR1H2P55055 460 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 CCNG2Q16589 344 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 SYCE2Q6PIF2 218 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 TMEM126BQ8IUX1 230 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 MICU2Q8IYU8 434 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 DCLK2Q8N568 766 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 FICDQ9BVA6 458 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 ADAM22Q9P0K1 906 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 DNAJB4Q9UDY4 337 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 SERPINB13Q9UIV8 391 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 EMILIN1Q9Y6C2 1016 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms