RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 NAGPAQ9UK23 515 aa10.57□□□□□ -0.72
SCN5A-210ENST00000455624 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 RRN3P2A6NIE6 340 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 GSG1L2A8MUP6 293 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 MBL2P11226 248 aaPredicted RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 ACADMP11310 421 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 SLC16A1P53985 500 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 ZNF177Q13360 481 aaPredicted RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 EFHC1Q5JVL4 640 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 EFL1Q7Z2Z2 1120 aaKnown RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 GJD4Q96KN9 370 aaPredicted RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 BRD8Q9H0E9 1235 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 RAB6BQ9NRW1 208 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 DYRK3O43781 588 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 POLBP06746 335 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 ERVK-10P10266 1014 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 NCAM1P13591 858 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 ALDH7A1P49419 539 aaKnown RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 NBPF9Q3BBW0 867 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 EPHA10Q5JZY3 1008 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 CCDC60Q8IWA6 550 aaPredicted RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 KIAA2013Q8IYS2 634 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 SMG5Q9UPR3 1016 aaKnown RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 EIF4E1BA6NMX2 242 aaKnown RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 TTLL13PA6NNM8 815 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 EIF3DO15371 548 aaKnown RBP eCLIP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 CYP2C9P11712 490 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 LONRF1Q17RB8 773 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 STRIP1Q5VSL9 837 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 PLA2G4FQ68DD2 849 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 C1orf131Q8NDD1 294 aaKnown RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 TBC1D16Q8TBP0 767 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 TEX13BQ9BXU2 312 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 FLT1P17948 1338 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 PREX2Q70Z35 1606 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 PSMD14O00487 310 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 MAP3K13O43283 966 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 NCKAP1LP55160 1127 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 POU4F1Q01851 419 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 KCNB1Q14721 858 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 DCAF6Q58WW2 860 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 PCYOX1LQ8NBM8 494 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 SCFD2Q8WU76 684 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 IL1RL2Q9HB29 575 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 ABI2Q9NYB9 513 aaPredicted RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 SPASTQ9UBP0 616 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 PRG3Q9Y2Y8 225 aaPredicted RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 ABCA8O94911 1581 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 RNASEH1O60930 286 aaKnown RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 SLC11A2P49281 568 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 SEMA3FQ13275 785 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 MTFR1Q15390 333 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 TFB1MQ8WVM0 346 aaKnown RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 L3MBTL3Q96JM7 780 aaPredicted RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 ASCC2Q9H1I8 757 aaPredicted RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 SCN3BQ9NY72 215 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 UVRAGQ9P2Y5 699 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 FHOD1Q9Y613 1164 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 SPRP35270 261 aaPredicted RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 THPOP40225 353 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 MRPS15P82914 257 aaKnown RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 TRIM65Q6PJ69 517 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 LVRNQ6Q4G3 990 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 FMR1NBQ8N0W7 255 aaPredicted RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 KRT78Q8N1N4 520 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 CHST13Q8NET6 341 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 VMP1Q96GC9 406 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 FAM84BQ96KN1 310 aaPredicted RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 MAGEB10Q96LZ2 347 aaPredicted RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 DPP3Q9NY33 737 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 KCND2Q9NZV8 630 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 PAK5Q9P286 719 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 EIF3LQ9Y262 564 aaKnown RBP10.56□□□□□ -0.72
SCN5A-210ENST00000455624 NEU2Q9Y3R4 380 aa10.56□□□□□ -0.72
SCN5A-210ENST00000455624 ADCY10Q96PN6 1610 aa10.55□□□□□ -0.72
SCN5A-210ENST00000455624 A0A1W2PQC6 194 aa10.55□□□□□ -0.72
SCN5A-210ENST00000455624 PNPLA4P41247 253 aa10.55□□□□□ -0.72
SCN5A-210ENST00000455624 FOXO4P98177 505 aa10.55□□□□□ -0.72
SCN5A-210ENST00000455624 PDIA5Q14554 519 aa10.55□□□□□ -0.72
SCN5A-210ENST00000455624 POLD3Q15054 466 aaPredicted RBP10.55□□□□□ -0.72
SCN5A-210ENST00000455624 DNAL1Q4LDG9 190 aa10.55□□□□□ -0.72
SCN5A-210ENST00000455624 CYP4A22Q5TCH4 519 aa10.55□□□□□ -0.72
SCN5A-210ENST00000455624 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.55□□□□□ -0.72
SCN5A-210ENST00000455624 PRUNE1Q86TP1 453 aa10.55□□□□□ -0.72
SCN5A-210ENST00000455624 SRBD1Q8N5C6 995 aaKnown RBP10.55□□□□□ -0.72
SCN5A-210ENST00000455624 NEDD1Q8NHV4 660 aa10.55□□□□□ -0.72
SCN5A-210ENST00000455624 MS4A14Q96JA4 679 aa10.55□□□□□ -0.72
SCN5A-210ENST00000455624 RNF112Q9ULX5 631 aa10.55□□□□□ -0.72
SCN5A-210ENST00000455624 FYNP06241 537 aa10.55□□□□□ -0.72
SCN5A-210ENST00000455624 ANXA11P50995 505 aaKnown RBP10.55□□□□□ -0.72
SCN5A-210ENST00000455624 PAN2Q504Q3 1202 aaKnown RBP10.55□□□□□ -0.72
SCN5A-210ENST00000455624 HERC6Q8IVU3 1022 aa10.55□□□□□ -0.72
SCN5A-210ENST00000455624 ARMC2Q8NEN0 867 aa10.55□□□□□ -0.72
SCN5A-210ENST00000455624 AGBL1Q96MI9 1066 aa10.55□□□□□ -0.72
SCN5A-210ENST00000455624 RBBP8Q99708 897 aa10.55□□□□□ -0.72
SCN5A-210ENST00000455624 TRMT6Q9UJA5 497 aaKnown RBP10.55□□□□□ -0.72
SCN5A-210ENST00000455624 PNPLA7Q6ZV29 1317 aa10.55□□□□□ -0.72
SCN5A-210ENST00000455624 AGTP01019 485 aa10.55□□□□□ -0.72
SCN5A-210ENST00000455624 FAM200BP0CF97 657 aa10.55□□□□□ -0.72
SCN5A-210ENST00000455624 RGS2P41220 211 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms