RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 CXCL17Q6UXB2 119 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 VSIG1Q86XK7 387 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 CRYBG2Q8N1P7 616 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 ZNF564Q8TBZ8 553 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 ATRIPQ8WXE1 791 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 TNIP3Q96KP6 325 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 FRMD8P1Q9BZ68 369 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 ARHGAP39Q9C0H5 1083 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 ADAM22Q9P0K1 906 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 CNOT8Q9UFF9 292 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 AGAP1Q9UPQ3 857 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 EFR3BQ9Y2G0 817 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 PCDHA3Q9Y5H8 950 aa7.27□□□□□ -1.25
ECHDC1-210ENST00000454859 TDRD15B5MCY1 1934 aaKnown RBP7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 SMIM28A0A1B0GU29 152 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 KBTBD13C9JR72 458 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 BUB1O43683 1085 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 ITGA4P13612 1032 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 WARSP23381 471 aaKnown RBP7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 PTPN7P35236 360 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 ACADSBP45954 432 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 RAD23BP54727 409 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 TRIM71Q2Q1W2 868 aaKnown RBP7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 FBXO47Q5MNV8 452 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 POLNQ7Z5Q5 900 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 ZNF784Q8NCA9 323 aaPredicted RBP7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 C3orf20Q8ND61 904 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 SPATA4Q8NEY3 305 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 CD99L2Q8TCZ2 262 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 APBB2Q92870 758 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 CD101Q93033 1021 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 PPP1R10Q96QC0 940 aaKnown RBP7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 NUP85Q9BW27 656 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 UBXN6Q9BZV1 441 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 ELAC1Q9H777 363 aaKnown RBP7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 FAM105AQ9NUU6 356 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 KANSL3Q9P2N6 904 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 FEZ2Q9UHY8 353 aaPredicted RBP7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 DSEQ9UL01 958 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 IPPQ9Y573 584 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 ALG6Q9Y672 507 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 A0A0U1RQF3 1178 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 MYADML2A6NDP7 307 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 ARVCFO00192 962 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 PITPNM1O00562 1244 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 TRPA1O75762 1119 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 PROSCO94903 275 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 PGK1P00558 417 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 KRT19P08727 400 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 CCND3P30281 292 aaPredicted RBP7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 LHX1P48742 406 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 RPL34P49207 117 aaKnown RBP7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 VEGFBP49765 207 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 HIC1Q14526 733 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 C1orf53Q5VUE5 145 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 LMBRD2Q68DH5 695 aaPredicted RBP7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 TWF2Q6IBS0 349 aaKnown RBP7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 MAATS1Q7Z4T9 603 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 ERICH1Q86X53 443 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 CEP120Q8N960 986 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 CCDC26Q8TAB7 109 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 FEZF2Q8TBJ5 459 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 ZSWIM1Q9BR11 485 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 OXCT2Q9BYC2 517 aaPredicted RBP7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 DDX56Q9NY93 547 aaKnown RBP7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 SNTG2Q9NY99 539 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 MTUS1Q9ULD2 1270 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 ST3GAL5Q9UNP4 418 aa7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 NOC2LQ9Y3T9 749 aaKnown RBP7.26□□□□□ -1.25
ECHDC1-210ENST00000454859 SIGLEC16A6NMB1 481 aa7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 ZNF487B1APH4 448 aa7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 ENC1O14682 589 aa7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 MEFVO15553 781 aaPredicted RBP7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 CHRNA1P02708 482 aa7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 INHAP05111 366 aa7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 PNMA6AP0CW24 399 aaPredicted RBP7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 AARSP49588 968 aaKnown RBP eCLIP7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 RWDD2BP57060 319 aa7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 FAM189BP81408 668 aa7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 GRIK3Q13003 919 aa7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 NNTQ13423 1086 aa7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 DHX34Q14147 1143 aaKnown RBP7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 ERCC6LQ2NKX8 1250 aa7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 NAA35Q5VZE5 725 aa7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 SPOPLQ6IQ16 392 aa7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 SYDE1Q6ZW31 735 aaPredicted RBP7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 SLC4A11Q8NBS3 891 aa7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 SMG8Q8ND04 991 aaKnown RBP7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 IPO4Q8TEX9 1081 aaKnown RBP7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 ARID3AQ99856 593 aa7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 BEGAINQ9BUH8 593 aa7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 CDHR5Q9HBB8 845 aa7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 NOD1Q9Y239 953 aa7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 SCN1AP35498 2009 aa7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 TANC1Q9C0D5 1861 aa7.25□□□□□ -1.25
ECHDC1-210ENST00000454859 TCRBV5S1A1TA0A578 114 aa7.24□□□□□ -1.25
ECHDC1-210ENST00000454859 FAM187AA6NFU0 413 aa7.24□□□□□ -1.25
ECHDC1-210ENST00000454859 SPDYE4A6NLX3 237 aa7.24□□□□□ -1.25
ECHDC1-210ENST00000454859 KPNA7A9QM74 516 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms